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The AID/APOBEC family of nucleic acid mutators
Silvestro G Conticello
Genome Biol. 2008; 9(6): 229. Published online 2008 June 17. doi: 10.1186/gb-2008-9-6-229
PMCID:
PMC2481415
Abstract Full Text PDF–1.0M
 Is Cited by the Following 20 Articles in this Archive:
Evolution of the deaminase fold and multiple origins of eukaryotic editing and mutagenic nucleic acid deaminases from bacterial toxin systems
Lakshminarayan M. Iyer, Dapeng Zhang, Igor B. Rogozin, L. Aravind
Nucleic Acids Res. 2011 December; 39(22): 9473–9497. Published online 2011 September 2. doi: 10.1093/nar/gkr691
PMCID:
PMC3239186
Abstract Full Text PDF–18M
Widespread RNA and DNA Sequence Differences in the Human Transcriptome
Mingyao Li, Isabel X. Wang, Yun Li, Alan Bruzel, Allison L. Richards, Jonathan M. Toung, Vivian G. Cheung
Science. Author manuscript; available in PMC 2012 January 1.
Published in final edited form as: Science. 2011 July 1; 333(6038): 53–58. Published online 2011 May 19. doi: 10.1126/science.1207018
PMCID:
PMC3204392
Abstract Full Text PDF–428K Supplementary Material
A novel immunity system for bacterial nucleic acid degrading toxins and its recruitment in various eukaryotic and DNA viral systems
Dapeng Zhang, Lakshminarayan M. Iyer, L. Aravind
Nucleic Acids Res. 2011 June; 39(11): 4532–4552. Published online 2011 February 8. doi: 10.1093/nar/gkr036
PMCID:
PMC3113570
Abstract Full Text PDF–28M Supplementary Material
Atomic Force Microscopy Studies Provide Direct Evidence for Dimerization of the HIV Restriction Factor APOBEC3G
Luda S. Shlyakhtenko, Alexander Y. Lushnikov, Ming Li, Lela Lackey, Reuben S. Harris, Yuri L. Lyubchenko
J Biol Chem. 2011 February 4; 286(5): 3387–3395. Published online 2010 December 1. doi: 10.1074/jbc.M110.195685
PMCID:
PMC3030345
Abstract Full Text Supplementary Material
A multi-stage genome-wide association study of bladder cancer identifies multiple susceptibility loci
Nathaniel Rothman, Montserrat Garcia-Closas, Nilanjan Chatterjee, Nuria Malats, Xifeng Wu, Jonine Figueroa, Francisco X Real, David Van Den Berg, Giuseppe Matullo, Dalsu Baris, Michael Thun, Lambertus A Kiemeney, Paolo Vineis, Immaculata De Vivo, Demetrius Albanes, Mark P Purdue, Thorunn Rafnar, Michelle A T Hildebrandt, Anne E Kiltie, Olivier Cussenot, Klaus Golka, Rajiv Kumar, Jack A Taylor, Jose I Mayordomo, Kevin B Jacobs, Manolis Kogevinas, Amy Hutchinson, Zhaoming Wang, Yi-Ping Fu, Ludmila Prokunina-Olsson, Laurie Burdette, Meredith Yeager, William Wheeler, Adonina Tardón, Consol Serra, Alfredo Carrato, Reina García-Closas, Josep Lloreta, Alison Johnson, Molly Schwenn, Margaret R Karagas, Alan Schned, Gerald Andriole, Jr, Robert Grubb, III, Amanda Black, Eric J Jacobs, W Ryan Diver, Susan M Gapstur, Stephanie J Weinstein, Jarmo Virtamo, Victoria K Cortessis, Manuela Gago-Dominguez, Malcolm C Pike, Mariana C Stern, Jian-Min Yuan, David Hunter, Monica McGrath, Colin P Dinney, Bogdan Czerniak, Meng Chen, Hushan Yang, Sita H Vermeulen, Katja K Aben, J Alfred Witjes, Remco R Makkinje, Patrick Sulem, Soren Besenbacher, Kari Stefansson, Elio Riboli, Paul Brennan, Salvatore Panico, Carmen Navarro, Naomi E Allen, H Bas Bueno-de-Mesquita, Dimitrios Trichopoulos, Neil Caporaso, Maria Teresa Landi, Federico Canzian, Borje Ljungberg, Anne Tjonneland, Francoise Clavel-Chapelon, David T Bishop, Mark T W Teo, Margaret A Knowles, Simonetta Guarrera, Silvia Polidoro, Fulvio Ricceri, Carlotta Sacerdote, Alessandra Allione, Geraldine Cancel-Tassin, Silvia Selinski, Jan G Hengstler, Holger Dietrich, Tony Fletcher, Peter Rudnai, Eugen Gurzau, Kvetoslava Koppova, Sophia C E Bolick, Ashley Godfrey, Zongli Xu, José I Sanz-Velez, María D García-Prats, Manuel Sanchez, Gabriel Valdivia, Stefano Porru, Simone Benhamou, Robert N Hoover, Joseph F Fraumeni, Jr., Debra T Silverman, Stephen J Chanock
Nat Genet. Author manuscript; available in PMC 2011 May 1.
Published in final edited form as: Nat Genet. 2010 November; 42(11): 978–984. Published online 2010 October 24. doi: 10.1038/ng.687
PMCID:
PMC3049891
Abstract Full Text PDF–542K Supplementary Material
Cytidine deaminases: AIDing DNA demethylation?
Eric L. Fritz, F. Nina Papavasiliou
Genes Dev. 2010 October 1; 24(19): 2107–2114. doi: 10.1101/gad.1963010
PMCID:
PMC2947763
Abstract Full Text PDF–194K
APOBEC2, a selective inhibitor of TGFβ signaling, regulates left-right axis specification during early embryogenesis
Alin Vonica, Alessandro Rosa, Brigitte Arduini, Ali H. Brivanlou
Dev Biol. Author manuscript; available in PMC 2011 February 14.
Published in final edited form as: Dev Biol. 2011 February 1; 350(1): 13–23. Published online 2010 September 27. doi: 10.1016/j.ydbio.2010.09.016
PMCID:
PMC3038383
Abstract Full Text PDF–1.2M Supplementary Material
APOBEC-1 MEDIATED RNA EDITING
Valerie Blanc, Nicholas O. Davidson
Wiley Interdiscip Rev Syst Biol Med. Author manuscript; available in PMC 2011 September 1.
Published in final edited form as: Wiley Interdiscip Rev Syst Biol Med. 2010 SEP-OCT; 2(5): 594–602. doi: 10.1002/wsbm.82
PMCID:
PMC3086428
Full Text PDF–328K
Large-scale analysis of structural, sequence and thermodynamic characteristics of A-to-I RNA editing sites in human Alu repeats
Yoav Kleinberger, Eli Eisenberg
BMC Genomics. 2010; 11: 453. Published online 2010 July 28. doi: 10.1186/1471-2164-11-453
PMCID:
PMC3091650
Abstract Full Text PDF–329K
Histone H2A and H2B Are Monoubiquitinated at AID-Targeted Loci
Glen M. Borchert, Nathaniel W. Holton, Kevin A. Edwards, Laura A. Vogel, Erik D. Larson
PLoS One. 2010; 5(7): e11641. Published online 2010 July 16. doi: 10.1371/journal.pone.0011641
PMCID:
PMC2905439
Abstract Full Text PDF–518K Supplementary Material
Innate Immune Signaling Induces High Levels of TC-specific Deaminase Activity in Primary Monocyte-derived Cells through Expression of APOBEC3A Isoforms
Beth K. Thielen, John P. McNevin, M. Juliana McElrath, Brook Vander Stoep Hunt, Kevin C. Klein, Jaisri R. Lingappa
J Biol Chem. 2010 September 3; 285(36): 27753–27766. Published online 2010 July 8. doi: 10.1074/jbc.M110.102822
PMCID:
PMC2934643
Abstract Full Text Supplementary Material
A Survey of Genomic Traces Reveals a Common Sequencing Error, RNA Editing, and DNA Editing
Alexander Wait Zaranek, Erez Y. Levanon, Tomer Zecharia, Tom Clegg, George M. Church
PLoS Genet. 2010 May; 6(5): e1000954. Published online 2010 May 20. doi: 10.1371/journal.pgen.1000954
PMCID:
PMC2873906
Abstract Full Text PDF–1.1M Supplementary Material
Initiation of HIV Reverse Transcription
Catherine Isel, Chantal Ehresmann, Roland Marquet
Viruses. 2010 January; 2(1): 213–243. Published online 2010 January 18. doi: 10.3390/v2010213
PMCID:
PMC3185550
Abstract Full Text PDF–623K
Crystal structure of the APOBEC3G catalytic domain reveals potential oligomerization interfaces
Shivender M. D. Shandilya, Madhavi N. L. Nalam, Ellen A. Nalivaika, Phillip J. Gross, John C. Valesano, Keisuke Shindo, Ming Li, Mary Munson, Elena Harjes, Takahide Kouno, Hiroshi Matsuo, Reuben S. Harris, Mohan Somasundaran, Celia A. Schiffer
Structure. Author manuscript; available in PMC 2010 August 1.
Published in final edited form as: Structure. 2010 January 13; 18(1): 28–38. doi: 10.1016/j.str.2009.10.016
PMCID:
PMC2913127
Abstract Full Text PDF–3.2M Supplementary Material
Deficiency in APOBEC2 Leads to a Shift in Muscle Fiber Type, Diminished Body Mass, and Myopathy
Yusuke Sato, Hans Christian Probst, Ryuichi Tatsumi, Yoshihide Ikeuchi, Michael S. Neuberger, Cristina Rada
J Biol Chem. 2010 March 5; 285(10): 7111–7118. Published online 2009 December 18. doi: 10.1074/jbc.M109.052977
PMCID:
PMC2844160
Abstract Full Text Supplementary Material
The appearance of pyrrolysine in tRNAHis guanylyltransferase by neutral evolution
Ilka U. Heinemann, Patrick O'Donoghue, Catherine Madinger, Jack Benner, Lennart Randau, Christopher J. Noren, Dieter Söll
Proc Natl Acad Sci U S A. 2009 December 15; 106(50): 21103–21108. Published online 2009 November 24. doi: 10.1073/pnas.0912072106
PMCID:
PMC2795538
Abstract Full Text PDF–1020K Supplementary Material
Chemical biology of mutagenesis and DNA repair: cellular responses to DNA alkylation
Nidhi Shrivastav, Deyu Li, John M. Essigmann
Carcinogenesis. 2010 January; 31(1): 59–70. Published online 2009 October 29. doi: 10.1093/carcin/bgp262
PMCID:
PMC2802671
Abstract Full Text PDF–404K
RNA editing: a driving force for adaptive evolution?
Willemijn M. Gommans, Sean P. Mullen, Stefan Maas
Bioessays. Author manuscript; available in PMC 2010 February 26.
Published in final edited form as: Bioessays. 2009 October; 31(10): 1137–1145. doi: 10.1002/bies.200900045
PMCID:
PMC2829293
Abstract Full Text PDF–434K
Deaminase-Independent Inhibition of Parvoviruses by the APOBEC3A Cytidine Deaminase
Iñigo Narvaiza, Daniel C. Linfesty, Benjamin N. Greener, Yoshiyuki Hakata, David J. Pintel, Eric Logue, Nathaniel R. Landau, Matthew D. Weitzman
PLoS Pathog. 2009 May; 5(5): e1000439. Published online 2009 May 22. doi: 10.1371/journal.ppat.1000439
PMCID:
PMC2678267
Abstract Full Text PDF–1.7M Supplementary Material
Are Viruses Inhibited by APOBEC3 Molecules from Their Host Species?
Susan R. Ross
PLoS Pathog. 2009 April; 5(4): e1000347. Published online 2009 April 24. doi: 10.1371/journal.ppat.1000347
PMCID:
PMC2667636
Full Text PDF–128K
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