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Consistent probabilistic outputs for protein function prediction
Guillaume Obozinski, Gert Lanckriet, Charles Grant, Michael I Jordan, William Stafford Noble
Genome Biol. 2008; 9(Suppl 1): S6. Published online 2008 June 27. doi: 10.1186/gb-2008-9-s1-s6
PMCID:
PMC2447540
Abstract Full Text PDF–641K Supplementary Material

Is Cited by the Following 6 Articles in this Archive:

A Genome-Wide Gene Function Prediction Resource for Drosophila melanogaster
Han Yan, Kavitha Venkatesan, John E. Beaver, Niels Klitgord, Muhammed A. Yildirim, Tong Hao, David E. Hill, Michael E. Cusick, Norbert Perrimon, Frederick P. Roth, Marc Vidal
PLoS One. 2010; 5(8): e12139. Published online 2010 August 12. doi: 10.1371/journal.pone.0012139
PMCID:
PMC2920829
Abstract Full Text PDF–2.8M Supplementary Material
Predicting gene function using hierarchical multi-label decision tree ensembles
Leander Schietgat, Celine Vens, Jan Struyf, Hendrik Blockeel, Dragi Kocev, Sašo Džeroski
BMC Bioinformatics. 2010; 11: 2. Published online 2010 January 2. doi: 10.1186/1471-2105-11-2
PMCID:
PMC2824675
Abstract Full Text PDF–2.1M
Annotating proteins with generalized functional linkages
Richard Llewellyn, David S. Eisenberg
Proc Natl Acad Sci U S A. 2008 November 18; 105(46): 17700–17705. Published online 2008 November 12. doi: 10.1073/pnas.0809583105
PMCID:
PMC2584710
Abstract Full Text PDF–1.1M Supplementary Material
OntoGene in BioCreative II
Fabio Rinaldi, Thomas Kappeler, Kaarel Kaljurand, Gerold Schneider, Manfred Klenner, Simon Clematide, Michael Hess, Jean-Marc von Allmen, Pierre Parisot, Martin Romacker, Therese Vachon
Genome Biol. 2008; 9(Suppl 2): S13. Published online 2008 September 1. doi: 10.1186/gb-2008-9-s2-s13
PMCID:
PMC2559984
Abstract Full Text PDF–702K
Gene mention normalization and interaction extraction with context models and sentence motifs
Jörg Hakenberg, Conrad Plake, Loic Royer, Hendrik Strobelt, Ulf Leser, Michael Schroeder
Genome Biol. 2008; 9(Suppl 2): S14. Published online 2008 September 1. doi: 10.1186/gb-2008-9-s2-s14
PMCID:
PMC2559985
Abstract Full Text PDF–779K Supplementary Material
Overview of the protein-protein interaction annotation extraction task of BioCreative II
Martin Krallinger, Florian Leitner, Carlos Rodriguez-Penagos, Alfonso Valencia
Genome Biol. 2008; 9(Suppl 2): S4. Published online 2008 September 1. doi: 10.1186/gb-2008-9-s2-s4
PMCID:
PMC2559988
Abstract Full Text PDF–2.2M
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