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Individual mRNA expression profiles reveal the effects of specific microRNAs
Amit Arora, David AC Simpson
Genome Biol. 2008; 9(5): R82. Published online 2008 May 16. doi: 10.1186/gb-2008-9-5-r82
PMCID:
PMC2441468
Abstract Full Text PDF–2.6M Supplementary Material
 Is Cited by the Following 17 Articles in this Archive:
Classification of dendritic cell phenotypes from gene expression data
Giacomo Tuana, Viola Volpato, Paola Ricciardi-Castagnoli, Francesca Zolezzi, Fabio Stella, Maria Foti
BMC Immunol. 2011; 12: 50. Published online 2011 August 29. doi: 10.1186/1471-2172-12-50
PMCID:
PMC3179938
Abstract Full Text PDF–1.3M Supplementary Material
MIRTFnet: Analysis of miRNA Regulated Transcription Factors
Haroon Naeem, Robert Küffner, Ralf Zimmer
PLoS One. 2011; 6(8): e22519. Published online 2011 August 17. doi: 10.1371/journal.pone.0022519
PMCID:
PMC3157336
Abstract Full Text PDF–609K Supplementary Material
MicroRNAs Differentially Expressed in Postnatal Aortic Development Downregulate Elastin via 3′ UTR and Coding-Sequence Binding Sites
Claus Eric Ott, Johannes Grünhagen, Marten Jäger, Daniel Horbelt, Simon Schwill, Klaus Kallenbach, Gao Guo, Thomas Manke, Petra Knaus, Stefan Mundlos, Peter N. Robinson
PLoS One. 2011; 6(1): e16250. Published online 2011 January 31. doi: 10.1371/journal.pone.0016250
PMCID:
PMC3031556
Abstract Full Text PDF–539K Supplementary Material
Transcriptional regulation of mammalian miRNA genes
Brian C. Schanen, Xiaoman Li
Genomics. Author manuscript; available in PMC 2012 January 1.
Published in final edited form as: Genomics. 2011 January; 97(1): 1–6. Published online 2010 October 23. doi: 10.1016/j.ygeno.2010.10.005
PMCID:
PMC3019299
Abstract Full Text PDF–318K
Detecting microRNA activity from gene expression data
Stephen F Madden, Susan B Carpenter, Ian B Jeffery, Harry Björkbacka, Katherine A Fitzgerald, Luke A O'Neill, Desmond G Higgins
BMC Bioinformatics. 2010; 11: 257. Published online 2010 May 18. doi: 10.1186/1471-2105-11-257
PMCID:
PMC2885376
Abstract Full Text PDF–1.1M Supplementary Material
Integrated analysis of microRNA and mRNA expression profiles in physiological myelopoiesis: role of hsa-mir-299-5p in CD34+ progenitor cells commitment
E Tenedini, E Roncaglia, F Ferrari, C Orlandi, E Bianchi, S Bicciato, E Tagliafico, S Ferrari
Cell Death Dis. 2010 February; 1(2): e28. Published online 2010 February 18. doi: 10.1038/cddis.2010.5
PMCID:
PMC3032330
Abstract Full Text PDF–661K Supplementary Material
Integration of microRNA changes in vivo identifies novel molecular features of muscle insulin resistance in type 2 diabetes
Iain J Gallagher, Camilla Scheele, Pernille Keller, Anders R Nielsen, Judit Remenyi, Christian P Fischer, Karim Roder, John Babraj, Claes Wahlestedt, Gyorgy Hutvagner, Bente K Pedersen, James A Timmons
Genome Med. 2010; 2(2): 9. Published online 2010 February 1. doi: 10.1186/gm130
PMCID:
PMC2847700
Abstract Full Text PDF–1.0M Supplementary Material
Prediction of microRNAs affecting mRNA expression during retinal development
Amit Arora, Jasenka Guduric-Fuchs, Laura Harwood, Margaret Dellett, Tiziana Cogliati, David A Simpson
BMC Dev Biol. 2010; 10: 1. Published online 2010 January 6. doi: 10.1186/1471-213X-10-1
PMCID:
PMC2821300
Abstract Full Text PDF–832K Supplementary Material
Identification of microRNA activity by Targets' Reverse EXpression
Stefano Volinia, Rosa Visone, Marco Galasso, Elda Rossi, Carlo M. Croce
Bioinformatics. 2010 January 1; 26(1): 91–97. Published online 2009 November 6. doi: 10.1093/bioinformatics/btp598
PMCID:
PMC2796810
Abstract Full Text PDF–849K Supplementary Material
Comprehensive Gene and microRNA Expression Profiling Reveals a Role for microRNAs in Human Liver Development
Galit Tzur, Ariel Israel, Asaf Levy, Hila Benjamin, Eti Meiri, Yoel Shufaro, Karen Meir, Elina Khvalevsky, Yael Spector, Nathan Rojansky, Zvi Bentwich, Benjamin E. Reubinoff, Eithan Galun
PLoS One. 2009; 4(10): e7511. Published online 2009 October 20. doi: 10.1371/journal.pone.0007511
PMCID:
PMC2760133
Abstract Full Text PDF–2.5M Supplementary Material
Reciprocal regulation of microRNA and mRNA profiles in neuronal development and synapse formation
Sergei A Manakov, Seth GN Grant, Anton J Enright
BMC Genomics. 2009; 10: 419. Published online 2009 September 8. doi: 10.1186/1471-2164-10-419
PMCID:
PMC2759968
Abstract Full Text PDF–1.0M Supplementary Material
mRNA expression profiles show differential regulatory effects of microRNAs between estrogen receptor-positive and estrogen receptor-negative breast cancer
Chao Cheng, Xuping Fu, Pedro Alves, Mark Gerstein
Genome Biol. 2009; 10(9): R90. Published online 2009 September 1. doi: 10.1186/gb-2009-10-9-r90
PMCID:
PMC2768979
Abstract Full Text PDF–429K Supplementary Material
The microRNA Signature in Response to Insulin Reveals Its Implication in the Transcriptional Action of Insulin in Human Skeletal Muscle and the Role of a Sterol Regulatory Element–Binding Protein-1c/Myocyte Enhancer Factor 2C Pathway
Aurélie Granjon, Marie-Paule Gustin, Jennifer Rieusset, Etienne Lefai, Emmanuelle Meugnier, Isabelle Güller, Catherine Cerutti, Christian Paultre, Emmanuel Disse, Rémi Rabasa-Lhoret, Martine Laville, Hubert Vidal, Sophie Rome
Diabetes. 2009 November; 58(11): 2555–2564. Published online 2009 August 31. doi: 10.2337/db09-0165
PMCID:
PMC2768160
Abstract Full Text PDF–451K Supplementary Material
Increased MicroRNA Activity in Human Cancers
Ariel Israel, Roded Sharan, Eytan Ruppin, Eithan Galun
PLoS One. 2009; 4(6): e6045. Published online 2009 June 25. doi: 10.1371/journal.pone.0006045
PMCID:
PMC2698213
Abstract Full Text PDF–252K Supplementary Material
Epigenetic Silencing of MicroRNA miR-107 Regulates Cyclin-Dependent Kinase 6 Expression in Pancreatic Cancer
Kwang-Hyuck Lee, Craig Lotterman, Collins Karikari, Noriyuki Omura, Georg Feldmann, Nils Habbe, Michael G. Goggins, Joshua T. Mendell, Anirban Maitra
Pancreatology. 2009 May; 9(3): 293–301. Published online 2009 April 29. doi: 10.1159/000186051
PMCID:
PMC2835374
Abstract Full Text PDF–225K
MicroRNA signatures in liver diseases
Xian-Ming Chen
World J Gastroenterol. 2009 April 14; 15(14): 1665–1672. Published online 2009 April 14. doi: 10.3748/wjg.15.1665
PMCID:
PMC2668771
Abstract Full Text PDF–1.0M
Expression profiles of switch-like genes accurately classify tissue and infectious disease phenotypes in model-based classification
Michael Gormley, Aydin Tozeren
BMC Bioinformatics. 2008; 9: 486. Published online 2008 November 17. doi: 10.1186/1471-2105-9-486
PMCID:
PMC2620272
Abstract Full Text PDF–2.7M Supplementary Material
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