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Alternative contingency table measures improve the power and detection of multifactor dimensionality reduction
William S Bush, Todd L Edwards, Scott M Dudek, Brett A McKinney, Marylyn D Ritchie
BMC Bioinformatics. 2008; 9: 238. Published online 2008 May 16. doi: 10.1186/1471-2105-9-238
PMCID:
PMC2412877
Abstract Full Text PDF–1.5M Supplementary Material

Is Cited by the Following 11 Articles in this Archive:

Identification of Novel Functional Inhibitors of Acid Sphingomyelinase
Johannes Kornhuber, Markus Muehlbacher, Stefan Trapp, Stefanie Pechmann, Astrid Friedl, Martin Reichel, Christiane Mühle, Lothar Terfloth, Teja W. Groemer, Gudrun M. Spitzer, Klaus R. Liedl, Erich Gulbins, Philipp Tripal
PLoS One. 2011; 6(8): e23852. Published online 2011 August 31. doi: 10.1371/journal.pone.0023852
PMCID:
PMC3166082
Abstract Full Text PDF–290K Supplementary Material
Information Metrics in Genetic Epidemiology
David L Tritchler, Lara Sucheston, Pritam Chanda, Murali Ramanathan
Stat Appl Genet Mol Biol. 2011 January 1; 10(1): Article 12. Published online 2011 February 23. doi: 10.2202/1544-6115.1569
PMCID:
PMC3058413
Abstract Full Text PDF–253K
A robust multifactor dimensionality reduction method for detecting gene-gene interactions with application to the genetic analysis of bladder cancer susceptibility
Jiang Gui, Angeline S. Andrew, Peter Andrews, Heather M. Nelson, Karl T. Kelsey, Margaret R. Karagas, Jason H. Moore
Ann Hum Genet. Author manuscript; available in PMC 2012 January 1.
Published in final edited form as: Ann Hum Genet. 2011 January; 75(1): 20–28. Published online 2010 November 22. doi: 10.1111/j.1469-1809.2010.00624.x
PMCID:
PMC3057873
Abstract Full Text PDF–429K
Comparison of information-theoretic to statistical methods for gene-gene interactions in the presence of genetic heterogeneity
Lara Sucheston, Pritam Chanda, Aidong Zhang, David Tritchler, Murali Ramanathan
BMC Genomics. 2010; 11: 487. Published online 2010 September 3. doi: 10.1186/1471-2164-11-487
PMCID:
PMC2996983
Abstract Full Text PDF–1.2M
A General Framework for Formal Tests of Interaction after Exhaustive Search Methods with Applications to MDR and MDR-PDT
Todd L. Edwards, Stephen D. Turner, Eric S. Torstenson, Scott M. Dudek, Eden R. Martin, Marylyn D. Ritchie
PLoS One. 2010; 5(2): e9363. Published online 2010 February 23. doi: 10.1371/journal.pone.0009363
PMCID:
PMC2826406
Abstract Full Text PDF–249K Supplementary Material
A cross-validation procedure for general pedigrees and matched odds ratio fitness metric implemented for the multifactor dimensionality reduction pedigree disequilibrium test
Todd L. Edwards, Eric Torstensen, Scott Dudek, Eden R. Martin, Marylyn D. Ritchie
Genet Epidemiol. Author manuscript; available in PMC 2011 February 1.
Published in final edited form as: Genet Epidemiol. 2010 February; 34(2): 194–199. doi: 10.1002/gepi.20447
PMCID:
PMC2811750
Abstract Full Text PDF–372K Supplementary Material
Bioinformatics challenges for genome-wide association studies
Jason H. Moore, Folkert W. Asselbergs, Scott M. Williams
Bioinformatics. 2010 February 15; 26(4): 445–455. Published online 2010 January 6. doi: 10.1093/bioinformatics/btp713
PMCID:
PMC2820680
Abstract Full Text PDF–715K
FINDING UNIQUE FILTER SETS IN PLATO: A PRECURSOR TO EFFICIENT INTERACTION ANALYSIS IN GWAS DATA
Benjamin J. Grady, Eric Torstenson, Scott M. Dudek, Justin Giles, David Sexton, Marylyn D. Ritchie
Pac Symp Biocomput. Author manuscript; available in PMC 2011 January 1.
Published in final edited form as: Pac Symp Biocomput. 2010: 315–326.
PMCID:
PMC2903053
Abstract Full Text PDF–1.0M
Detecting purely epistatic multi-locus interactions by an omnibus permutation test on ensembles of two-locus analyses
Waranyu Wongseree, Anunchai Assawamakin, Theera Piroonratana, Saravudh Sinsomros, Chanin Limwongse, Nachol Chaiyaratana
BMC Bioinformatics. 2009; 10: 294. Published online 2009 September 17. doi: 10.1186/1471-2105-10-294
PMCID:
PMC2759961
Abstract Full Text PDF–1.6M Supplementary Material
Epistasis and Its Implications for Personal Genetics
Jason H. Moore, Scott M. Williams
Am J Hum Genet. 2009 September 11; 85(3): 309–320. doi: 10.1016/j.ajhg.2009.08.006
PMCID:
PMC2771593
Abstract Full Text PDF–382K
Exploring the Performance of Multifactor Dimensionality Reduction in Large Scale SNP Studies and in the Presence of Genetic Heterogeneity among Epistatic Disease Models
Todd L. Edwards, Kenneth Lewis, Digna R. Velez, Scott Dudek, Marylyn D. Ritchie
Hum Hered. 2009 February; 67(3): 183–192. Published online 2008 December 15. doi: 10.1159/000181157
PMCID:
PMC3078287
Abstract Full Text PDF–185K Supplementary Material
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