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CPSARST: an efficient circular permutation search tool applied to the detection of novel protein structural relationships
Wei-Cheng Lo, Ping-Chiang Lyu
Genome Biol. 2008; 9(1): R11. Published online 2008 January 18. doi: 10.1186/gb-2008-9-1-r11
PMCID:
PMC2395249
Abstract Full Text PDF–2.6M Supplementary Material

Is Cited by the Following 6 Articles in this Archive:

Circular Permutation in Proteins
Spencer Bliven, Andreas Prlić
PLoS Comput Biol. 2012 March; 8(3): e1002445. Published online 2012 March 29. doi: 10.1371/journal.pcbi.1002445
PMCID:
PMC3320104
Full Text PDF–327K Supplementary Material
Deciphering the Preference and Predicting the Viability of Circular Permutations in Proteins
Wei-Cheng Lo, Tian Dai, Yen-Yi Liu, Li-Fen Wang, Jenn-Kang Hwang, Ping-Chiang Lyu
PLoS One. 2012; 7(2): e31791. Published online 2012 February 16. doi: 10.1371/journal.pone.0031791
PMCID:
PMC3281007
Abstract Full Text PDF–900K Supplementary Material
Intra-chain 3D Segment Swapping Spawns the Evolution of New Multidomain Protein Architectures
András Szilágyi, Yang Zhang, Péter Závodszky
J Mol Biol. Author manuscript; available in PMC 2013 January 6.
Published in final edited form as: J Mol Biol. 2012 January 6; 415(1): 221–235. Published online 2011 November 4. doi: 10.1016/j.jmb.2011.10.045
PMCID:
PMC3249503
Free in PMC on 2013/01/06
Detection and Alignment of 3D Domain Swapping Proteins Using Angle-Distance Image-Based Secondary Structural Matching Techniques
Chia-Han Chu, Wei-Cheng Lo, Hsin-Wei Wang, Yen-Chu Hsu, Jenn-Kang Hwang, Ping-Chiang Lyu, Tun-Wen Pai, Chuan Yi Tang
PLoS One. 2010; 5(10): e13361. Published online 2010 October 14. doi: 10.1371/journal.pone.0013361
PMCID:
PMC2955075
Abstract Full Text PDF–1.1M Supplementary Material
iSARST: an integrated SARST web server for rapid protein structural similarity searches
Wei-Cheng Lo, Che-Yu Lee, Chi-Ching Lee, Ping-Chiang Lyu
Nucleic Acids Res. 2009 July 1; 37(Web Server issue): W545–W551. Published online 2009 July 1. doi: 10.1093/nar/gkp291
PMCID:
PMC2703971
Abstract Full Text PDF–7.0M Supplementary Material
CPDB: a database of circular permutation in proteins
Wei-Cheng Lo, Chi-Ching Lee, Che-Yu Lee, Ping-Chiang Lyu
Nucleic Acids Res. 2009 January; 37(Database issue): D328–D332. Published online 2009 January. doi: 10.1093/nar/gkn679
PMCID:
PMC2686539
Abstract Full Text PDF–3.0M
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