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Correcting for sequence biases in present/absent calls
Eugene F Schuster, Eric Blanc, Linda Partridge, Janet M Thornton
Genome Biol. 2007; 8(6): R125. Published online 2007 June 26. doi: 10.1186/gb-2007-8-6-r125
PMCID:
PMC2394774
Abstract Full Text PDF–1.2M Supplementary Material

Is Cited by the Following 9 Articles in this Archive:

Single feature polymorphisms (SFPs) for drought tolerance in pigeonpea (Cajanus spp.)
Rachit K. Saxena, Xinping Cui, Vivek Thakur, Barbara Walter, Timothy J. Close, Rajeev K. Varshney
Funct Integr Genomics. 2011 December; 11(4): 651–657. Published online 2011 May 6. doi: 10.1007/s10142-011-0227-2
PMCID:
PMC3220819
Abstract Full Text PDF–205K Supplementary Material
A wholly defined Agilent microarray spike-in dataset
Qianqian Zhu, Jeffrey C. Miecznikowski, Marc S. Halfon
Bioinformatics. 2011 May 1; 27(9): 1284–1289. Published online 2011 March 16. doi: 10.1093/bioinformatics/btr135
PMCID:
PMC3109518
Abstract Full Text PDF–643K Supplementary Material
Expression breadth and expression abundance behave differently in correlations with evolutionary rates
Seung Gu Park, Sun Shim Choi
BMC Evol Biol. 2010; 10: 241. Published online 2010 August 7. doi: 10.1186/1471-2148-10-241
PMCID:
PMC2924872
Abstract Full Text PDF–1.9M Supplementary Material
Preferred analysis methods for Affymetrix GeneChips. II. An expanded, balanced, wholly-defined spike-in dataset
Qianqian Zhu, Jeffrey C Miecznikowski, Marc S Halfon
BMC Bioinformatics. 2010; 11: 285. Published online 2010 May 27. doi: 10.1186/1471-2105-11-285
PMCID:
PMC2897828
Abstract Full Text PDF–5.1M Supplementary Material
Estimating the proportion of microarray probes expressed in an RNA sample
Wei Shi, Carolyn A. de Graaf, Sarah A. Kinkel, Ariel H. Achtman, Tracey Baldwin, Louis Schofield, Hamish S. Scott, Douglas J. Hilton, Gordon K. Smyth
Nucleic Acids Res. 2010 April; 38(7): 2168–2176. Published online 2010 April. doi: 10.1093/nar/gkp1204
PMCID:
PMC2853118
Abstract Full Text PDF–933K Supplementary Material
Regulation of Lifespan, Metabolism, and Stress Responses by the Drosophila SH2B Protein, Lnk
Cathy Slack, Christian Werz, Daniela Wieser, Nazif Alic, Andrea Foley, Hugo Stocker, Dominic J. Withers, Janet M. Thornton, Ernst Hafen, Linda Partridge
PLoS Genet. 2010 March; 6(3): e1000881. Published online 2010 March 19. doi: 10.1371/journal.pgen.1000881
PMCID:
PMC2841611
Abstract Full Text PDF–2.3M Supplementary Material
Adaptable gene-specific dye bias correction for two-channel DNA microarrays
Thanasis Margaritis, Philip Lijnzaad, Dik van Leenen, Diane Bouwmeester, Patrick Kemmeren, Sander R van Hooff, Frank CP Holstege
Mol Syst Biol. 2009; 5: 266. Published online 2009 April 28. doi: 10.1038/msb.2009.21
PMCID:
PMC2683724
Abstract Full Text PDF–2.0M Supplementary Material
Improved analysis of bacterial CGH data beyond the log-ratio paradigm
Lars Snipen, Otto L Nyquist, Margrete Solheim, Ågot Aakra, Ingolf F Nes
BMC Bioinformatics. 2009; 10: 91. Published online 2009 March 19. doi: 10.1186/1471-2105-10-91
PMCID:
PMC2679023
Abstract Full Text PDF–2.4M
Developmental Constraints on Vertebrate Genome Evolution
Julien Roux, Marc Robinson-Rechavi
PLoS Genet. 2008 December; 4(12): e1000311. Published online 2008 December 19. doi: 10.1371/journal.pgen.1000311
PMCID:
PMC2600815
Abstract Full Text PDF–457K Supplementary Material
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