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Coverage and error models of protein-protein interaction data by directed graph analysis
Tony Chiang, Denise Scholtens, Deepayan Sarkar, Robert Gentleman, Wolfgang Huber
Genome Biol. 2007; 8(9): R186. Published online 2007 September 10. doi: 10.1186/gb-2007-8-9-r186
PMCID:
PMC2375024
Abstract Full Text PDF–770K Supplementary Material

Is Cited by the Following 7 Articles in this Archive:

Towards a Rigorous Network of Protein-Protein Interactions of the Model Sulfate Reducer Desulfovibrio vulgaris Hildenborough
Swapnil R. Chhabra, Marcin P. Joachimiak, Christopher J. Petzold, Grant M. Zane, Morgan N. Price, Sonia A. Reveco, Veronica Fok, Alyssa R. Johanson, Tanveer S. Batth, Mary Singer, John-Marc Chandonia, Dominique Joyner, Terry C. Hazen, Adam P. Arkin, Judy D. Wall, Anup K. Singh, Jay D. Keasling
PLoS One. 2011; 6(6): e21470. Published online 2011 June 28. doi: 10.1371/journal.pone.0021470
PMCID:
PMC3125180
Abstract Full Text PDF–712K Supplementary Material
From evidence to inference: probing the evolution of protein interaction networks
Oliver Ratmann, Carsten Wiuf, John W. Pinney
HFSP J. 2009 October; 3(5): 290–306. Published online 2009 October 19. doi: 10.2976/1.3167215
PMCID:
PMC2801530
Abstract Full Text PDF–380K
Triangle network motifs predict complexes by complementing high-error interactomes with structural information
Bill Andreopoulos, Christof Winter, Dirk Labudde, Michael Schroeder
BMC Bioinformatics. 2009; 10: 196. Published online 2009 June 27. doi: 10.1186/1471-2105-10-196
PMCID:
PMC2714575
Abstract Full Text PDF–3.0M Supplementary Material
An experimentally derived confidence score for binary protein-protein interactions
Pascal Braun, Murat Tasan, Matija Dreze, Miriam Barrios-Rodiles, Irma Lemmens, Haiyuan Yu, Julie M Sahalie, Ryan R Murray, Luba Roncari, Anne-Sophie de Smet, Kavitha Venkatesan, Jean-François Rual, Michael E Cusick, Tony Pawson, David E Hill, Jan Tavernier, Jeffrey L Wrana, Frederick P Roth, Marc Vidal
Nat Methods. Author manuscript; available in PMC 2010 November 9.
Published in final edited form as: Nat Methods. 2009 January; 6(1): 91–97. Published online 2008 December 7. doi: 10.1038/nmeth.1281
PMCID:
PMC2976677
Abstract Full Text PDF–1004K Supplementary Material
Modeling synthetic lethality
Nolwenn Le Meur, Robert Gentleman
Genome Biol. 2008; 9(9): R135. Published online 2008 September 12. doi: 10.1186/gb-2008-9-9-r135
PMCID:
PMC2592713
Abstract Full Text PDF–393K Supplementary Material
Protein Interaction Predictions from Diverse Sources
Yin Liu, Inyoung Kim, Hongyu Zhao
Drug Discov Today. Author manuscript; available in PMC 2011 August 30.
Published in final edited form as: Drug Discov Today. 2008 May; 13(9-10): 409–416. Published online 2008 March 6. doi: 10.1016/j.drudis.2008.01.005
PMCID:
PMC3164358
Abstract Full Text PDF–423K
Making the most of high-throughput protein-interaction data
Robert Gentleman, Wolfgang Huber
Genome Biol. 2007; 8(10): 112. Published online 2007 November 2. doi: 10.1186/gb-2007-8-10-112
PMCID:
PMC2246275
Abstract Full Text PDF–223K
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