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Cross-species cluster co-conservation: a new method for generating protein interaction networks
Anis Karimpour-Fard, Corrella S Detweiler, Kimberly D Erickson, Lawrence Hunter, Ryan T Gill
Genome Biol. 2007; 8(9): R185. Published online 2007 September 5. doi: 10.1186/gb-2007-8-9-r185
PMCID:
PMC2375023
Abstract Full Text PDF–1.9M Supplementary Material
 Is Cited by the Following 5 Articles in this Archive:
Biomedical Discovery Acceleration, with Applications to Craniofacial Development
Sonia M. Leach, Hannah Tipney, Weiguo Feng, William A. Baumgartner, Jr., Priyanka Kasliwal, Ronald P. Schuyler, Trevor Williams, Richard A. Spritz, Lawrence Hunter
PLoS Comput Biol. 2009 March; 5(3): e1000215. Published online 2009 March 27. doi: 10.1371/journal.pcbi.1000215
PMCID:
PMC2653649
Abstract Full Text PDF–1.6M Supplementary Material
Predicting protein linkages in bacteria: Which method is best depends on task
Anis Karimpour-Fard, Sonia M Leach, Ryan T Gill, Lawrence E Hunter
BMC Bioinformatics. 2008; 9: 397. Published online 2008 September 24. doi: 10.1186/1471-2105-9-397
PMCID:
PMC2570368
Abstract Full Text PDF–1.7M
The topology of the bacterial co-conserved protein network and its implications for predicting protein function
Anis Karimpour-Fard, Sonia M Leach, Lawrence E Hunter, Ryan T Gill
BMC Genomics. 2008; 9: 313. Published online 2008 June 30. doi: 10.1186/1471-2164-9-313
PMCID:
PMC2488357
Abstract Full Text PDF–687K Supplementary Material
Improving protein function prediction methods with integrated literature data
Aaron P Gabow, Sonia M Leach, William A Baumgartner, Lawrence E Hunter, Debra S Goldberg
BMC Bioinformatics. 2008; 9: 198. Published online 2008 April 15. doi: 10.1186/1471-2105-9-198
PMCID:
PMC2375131
Abstract Full Text PDF–746K Supplementary Material
Investigation of factors affecting prediction of protein-protein interaction networks by phylogenetic profiling
Anis Karimpour-Fard, Lawrence Hunter, Ryan T Gill
BMC Genomics. 2007; 8: 393. Published online 2007 October 29. doi: 10.1186/1471-2164-8-393
PMCID:
PMC2204017
Abstract Full Text PDF–797K Supplementary Material
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