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Metabolic peculiarities of Aspergillus niger disclosed by comparative metabolic genomics
Jibin Sun, Xin Lu, Ursula Rinas, An Ping Zeng
Genome Biol. 2007; 8(9): R182. Published online 2007 September 4. doi: 10.1186/gb-2007-8-9-r182
PMCID:
PMC2375020
Abstract Full Text PDF–683K Supplementary Material
 Is Cited by the Following 7 Articles in this Archive:
Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88
Mikael R. Andersen, Margarita P. Salazar, Peter J. Schaap, Peter J.I. van de Vondervoort, David Culley, Jette Thykaer, Jens C. Frisvad, Kristian F. Nielsen, Richard Albang, Kaj Albermann, Randy M. Berka, Gerhard H. Braus, Susanna A. Braus-Stromeyer, Luis M. Corrochano, Ziyu Dai, Piet W.M. van Dijck, Gerald Hofmann, Linda L. Lasure, Jon K. Magnuson, Hildegard Menke, Martin Meijer, Susan L. Meijer, Jakob B. Nielsen, Michael L. Nielsen, Albert J.J. van Ooyen, Herman J. Pel, Lars Poulsen, Rob A. Samson, Hein Stam, Adrian Tsang, Johannes M. van den Brink, Alex Atkins, Andrea Aerts, Harris Shapiro, Jasmyn Pangilinan, Asaf Salamov, Yigong Lou, Erika Lindquist, Susan Lucas, Jane Grimwood, Igor V. Grigoriev, Christian P. Kubicek, Diego Martinez, Noël N.M.E. van Peij, Johannes A. Roubos, Jens Nielsen, Scott E. Baker
Genome Res. 2011 June; 21(6): 885–897. doi: 10.1101/gr.112169.110
PMCID:
PMC3106321
Abstract Full Text PDF–894K
Shotgun Proteomics of Aspergillus niger Microsomes upon d-Xylose Induction
José Miguel P. Ferreira de Oliveira, Mark W. J. van Passel, Peter J. Schaap, Leo H. de Graaff
Appl Environ Microbiol. 2010 July; 76(13): 4421–4429. Published online 2010 May 7. doi: 10.1128/AEM.00482-10
PMCID:
PMC2897441
Abstract Full Text PDF–1.6M Supplementary Material
The intra- and extracellular proteome of Aspergillus niger growing on defined medium with xylose or maltose as carbon substrate
Xin Lu, Jibin Sun, Manfred Nimtz, Josef Wissing, An-Ping Zeng, Ursula Rinas
Microb Cell Fact. 2010; 9: 23. Published online 2010 April 20. doi: 10.1186/1475-2859-9-23
PMCID:
PMC2874515
Abstract Full Text PDF–1.6M Supplementary Material
Metabolic and Developmental Effects Resulting from Deletion of the citA Gene Encoding Citrate Synthase in Aspergillus nidulans
Sandra L. Murray, Michael J. Hynes
Eukaryot Cell. 2010 April; 9(4): 656–666. doi: 10.1128/EC.00373-09
PMCID:
PMC2863417
Abstract Full Text PDF–1.6M
Transcriptomic response of the mycoparasitic fungus Trichoderma atroviride to the presence of a fungal prey
Verena Seidl, Lifu Song, Erika Lindquist, Sabine Gruber, Alexeji Koptchinskiy, Susanne Zeilinger, Monika Schmoll, Pedro Martínez, Jibin Sun, Igor Grigoriev, Alfredo Herrera-Estrella, Scott E Baker, Christian P Kubicek
BMC Genomics. 2009; 10: 567. Published online 2009 November 30. doi: 10.1186/1471-2164-10-567
PMCID:
PMC2794292
Abstract Full Text PDF–548K Supplementary Material
Metabolic model integration of the bibliome, genome, metabolome and reactome of Aspergillus niger
Mikael Rørdam Andersen, Michael Lynge Nielsen, Jens Nielsen
Mol Syst Biol. 2008; 4: 178. Published online 2008 March 25. doi: 10.1038/msb.2008.12
PMCID:
PMC2290933
Abstract Full Text PDF–495K Supplementary Material
Genome-Scale Metabolic Network Analysis of the Opportunistic Pathogen Pseudomonas aeruginosa PAO1
Matthew A. Oberhardt, Jacek Puchałka, Kimberly E. Fryer, Vítor A. P. Martins dos Santos, Jason A. Papin
J Bacteriol. 2008 April; 190(8): 2790–2803. Published online 2008 January 11. doi: 10.1128/JB.01583-07
PMCID:
PMC2293256
Abstract Full Text PDF–1.0M Supplementary Material
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