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Species-specific shifts in centromere sequence composition are coincident with breakpoint reuse in karyotypically divergent lineages
Kira V Bulazel, Gianni C Ferreri, Mark DB Eldridge, Rachel J O'Neill
Genome Biol. 2007; 8(8): R170. Published online 2007 August 20. doi: 10.1186/gb-2007-8-8-r170
PMCID:
PMC2375000
Abstract Full Text PDF–1.0M Supplementary Material

Is Cited by the Following 12 Articles in this Archive:

Making a long story short: noncoding RNAs and chromosome change
J D Brown, S E Mitchell, R J O'Neill
Heredity (Edinb) 2012 January; 108(1): 42–49. Published online 2011 November 9. doi: 10.1038/hdy.2011.104
PMCID:
PMC3238116
Free in PMC on 2013/01/01
Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development
Marilyn B Renfree, Anthony T Papenfuss, Janine E Deakin, James Lindsay, Thomas Heider, Katherine Belov, Willem Rens, Paul D Waters, Elizabeth A Pharo, Geoff Shaw, Emily SW Wong, Christophe M Lefèvre, Kevin R Nicholas, Yoko Kuroki, Matthew J Wakefield, Kyall R Zenger, Chenwei Wang, Malcolm Ferguson-Smith, Frank W Nicholas, Danielle Hickford, Hongshi Yu, Kirsty R Short, Hannah V Siddle, Stephen R Frankenberg, Keng Yih Chew, Brandon R Menzies, Jessica M Stringer, Shunsuke Suzuki, Timothy A Hore, Margaret L Delbridge, Amir Mohammadi, Nanette Y Schneider, Yanqiu Hu, William O'Hara, Shafagh Al Nadaf, Chen Wu, Zhi-Ping Feng, Benjamin G Cocks, Jianghui Wang, Paul Flicek, Stephen MJ Searle, Susan Fairley, Kathryn Beal, Javier Herrero, Dawn M Carone, Yutaka Suzuki, Sumio Sugano, Atsushi Toyoda, Yoshiyuki Sakaki, Shinji Kondo, Yuichiro Nishida, Shoji Tatsumoto, Ion Mandiou, Arthur Hsu, Kaighin A McColl, Benjamin Lansdell, George Weinstock, Elizabeth Kuczek, Annette McGrath, Peter Wilson, Artem Men, Mehlika Hazar-Rethinam, Allison Hall, John Davis, David Wood, Sarah Williams, Yogi Sundaravadanam, Donna M Muzny, Shalini N Jhangiani, Lora R Lewis, Margaret B Morgan, Geoffrey O Okwuonu, San Juana Ruiz, Jireh Santibanez, Lynne Nazareth, Andrew Cree, Gerald Fowler, Christie L Kovar, Huyen H Dinh, Vandita Joshi, Chyn Jing, Fremiet Lara, Rebecca Thornton, Lei Chen, Jixin Deng, Yue Liu, Joshua Y Shen, Xing-Zhi Song, Janette Edson, Carmen Troon, Daniel Thomas, Amber Stephens, Lankesha Yapa, Tanya Levchenko, Richard A Gibbs, Desmond W Cooper, Terence P Speed, Asao Fujiyama, Jennifer A M Graves, Rachel J O'Neill, Andrew J Pask, Susan M Forrest, Kim C Worley
Genome Biol. 2011; 12(8): R81. Published online 2011 August 19. doi: 10.1186/gb-2011-12-8-r81
Correction in:
Genome Biol. 2011; 12(12): 414.
PMCID:
PMC3277949
Abstract Full Text PDF–3.5M Supplementary Material Correction
Recent Amplification of the Kangaroo Endogenous Retrovirus, KERV, Limited to the Centromere
Gianni C. Ferreri, Judith D. Brown, Craig Obergfell, Nathaniel Jue, Caitlin E. Finn, Michael J. O'Neill, Rachel J. O'Neill
J Virol. 2011 May; 85(10): 4761–4771. doi: 10.1128/JVI.01604-10
PMCID:
PMC3126163
Abstract Full Text PDF–1.5M
Genome-wide characterization of centromeric satellites from multiple mammalian genomes
Can Alkan, Maria Francesca Cardone, Claudia Rita Catacchio, Francesca Antonacci, Stephen J. O'Brien, Oliver A. Ryder, Stefania Purgato, Monica Zoli, Giuliano Della Valle, Evan E. Eichler, Mario Ventura
Genome Res. 2011 January; 21(1): 137–145. doi: 10.1101/gr.111278.110
PMCID:
PMC3012921
Abstract Full Text PDF–621K
Ancestral grass karyotype reconstruction unravels new mechanisms of genome shuffling as a source of plant evolution
Florent Murat, Jian-Hong Xu, Eric Tannier, Michael Abrouk, Nicolas Guilhot, Caroline Pont, Joachim Messing, Jérôme Salse
Genome Res. 2010 November; 20(11): 1545–1557. doi: 10.1101/gr.109744.110
PMCID:
PMC2963818
Abstract Full Text PDF–1.7M
Every genome sequence needs a good map
Harris A. Lewin, Denis M. Larkin, Joan Pontius, Stephen J. O'Brien
Genome Res. 2009 November; 19(11): 1925–1928. doi: 10.1101/gr.094557.109
PMCID:
PMC2775595
Full Text PDF–84K
Distinct retroelement classes define evolutionary breakpoints demarcating sites of evolutionary novelty
Mark S Longo, Dawn M Carone, NISC Comparative Sequencing Program, Eric D Green, Michael J O'Neill, Rachel J O'Neill
BMC Genomics. 2009; 10: 334. Published online 2009 July 24. doi: 10.1186/1471-2164-10-334
PMCID:
PMC2736999
Abstract Full Text PDF–1.1M Supplementary Material
Breakpoint regions and homologous synteny blocks in chromosomes have different evolutionary histories
Denis M. Larkin, Greg Pape, Ravikiran Donthu, Loretta Auvil, Michael Welge, Harris A. Lewin
Genome Res. 2009 May; 19(5): 770–777. doi: 10.1101/gr.086546.108
PMCID:
PMC2675965
Abstract Full Text PDF–490K
Breakpoint graphs and ancestral genome reconstructions
Max A. Alekseyev, Pavel A. Pevzner
Genome Res. 2009 May; 19(5): 943–957. doi: 10.1101/gr.082784.108
PMCID:
PMC2675983
Abstract Full Text PDF–1.8M
Epigenetic regulation of centromeric chromatin: old dogs, new tricks?
Robin C. Allshire, Gary H. Karpen
Nat Rev Genet. Author manuscript; available in PMC 2009 June 1.
Published in final edited form as: Nat Rev Genet. 2008 December; 9(12): 923–937. doi: 10.1038/nrg2466
PMCID:
PMC2586333
Abstract Full Text PDF–1.5M
Intergenic Locations of Rice Centromeric Chromatin
Huihuang Yan, Paul B Talbert, Hye-Ran Lee, Jamie Jett, Steven Henikoff, Feng Chen, Jiming Jiang
PLoS Biol. 2008 November; 6(11): e286. Published online 2008 November 25. doi: 10.1371/journal.pbio.0060286
PMCID:
PMC2586382
Abstract Full Text PDF–879K Supplementary Material
Genomic Instability Within Centromeres of Interspecific Marsupial Hybrids
Cushla J. Metcalfe, Kira V. Bulazel, Gianni C. Ferreri, Elizabeth Schroeder-Reiter, Gerhard Wanner, Willem Rens, Craig Obergfell, Mark D. B. Eldridge, Rachel J. O'Neill
Genetics. 2007 December; 177(4): 2507–2517. doi: 10.1534/genetics.107.082313
PMCID:
PMC2219476
Abstract Full Text PDF–1.3M
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