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Microarray-based gene expression profiles in multiple tissues of the domesticated silkworm, Bombyx mori
Qingyou Xia, Daojun Cheng, Jun Duan, Genhong Wang, Tingcai Cheng, Xingfu Zha, Chun Liu, Ping Zhao, Fangyin Dai, Ze Zhang, Ningjia He, Liang Zhang, Zhonghuai Xiang
Genome Biol. 2007; 8(8): R162. Published online 2007 August 4. doi: 10.1186/gb-2007-8-8-r162
PMCID:
PMC2374993
Abstract Full Text PDF–36M Supplementary Material
 Is Cited by the Following 30 Articles in this Archive:
Pathogen-origin horizontally transferred genes contribute to the evolution of Lepidopteran insects
Zi-Wen Li, Yi-Hong Shen, Zhong-Huai Xiang, Ze Zhang
BMC Evol Biol. 2011; 11: 356. Published online 2011 December 12. doi: 10.1186/1471-2148-11-356
PMCID:
PMC3252269
Abstract Full Text PDF–3.6M Supplementary Material
Molecular Cloning and Characterization of Ecdysone oxidase and 3-dehydroecdysone-3α-reductase Involved in the Ecdysone Inactivation Pathway of Silkworm, Bombyx mori
Wei Sun, Yi-Hong Shen, Deng-Wei Qi, Zhong-Huai Xiang, Ze Zhang
Int J Biol Sci. 2012; 8(1): 125–138. Published online 2011 December 8.
PMCID:
PMC3248655
Abstract Full Text PDF–1.5M Supplementary Material
No Excess Gene Movement Is Detected off the Avian or Lepidopteran Z Chromosome
Melissa A. Toups, James B. Pease, Matthew W. Hahn
Genome Biol Evol. 2011; 3: 1381–1390. Published online 2011 October 24. doi: 10.1093/gbe/evr109
PMCID:
PMC3242482
Abstract Full Text PDF–143K
Genome-wide identification and characterization of ATP-binding cassette transporters in the silkworm, Bombyx mori
Shumin Liu, Shun Zhou, Ling Tian, Enen Guo, Yunxia Luan, Jianzhen Zhang, Sheng Li
BMC Genomics. 2011; 12: 491. Published online 2011 October 7. doi: 10.1186/1471-2164-12-491
PMCID:
PMC3224256
Abstract Full Text PDF–1.3M Supplementary Material
Development of a Pacific oyster (Crassostrea gigas) 31,918-feature microarray: identification of reference genes and tissue-enriched expression patterns
Nolwenn M Dheilly, Christophe Lelong, Arnaud Huvet, Pascal Favrel
BMC Genomics. 2011; 12: 468. Published online 2011 September 27. doi: 10.1186/1471-2164-12-468
PMCID:
PMC3191543
Abstract Full Text PDF–3.1M Supplementary Material
Characterisation of a Desmosterol Reductase Involved in Phytosterol Dealkylation in the Silkworm, Bombyx mori
Leonora F. Ciufo, Patricia A. Murray, Anu Thompson, Daniel J. Rigden, Huw H. Rees
PLoS One. 2011; 6(6): e21316. Published online 2011 June 27. doi: 10.1371/journal.pone.0021316
PMCID:
PMC3124498
Abstract Full Text PDF–1002K
BmDJ-1 Is a Key Regulator of Oxidative Modification in the Development of the Silkworm, Bombyx mori
Hiroko Tabunoki, Hiroaki Ode, Yutaka Banno, Susumu Katsuma, Toru Shimada, Kazuei Mita, Kimiko Yamamoto, Ryoichi Sato, Reiko Ishii-Nozawa, Jun-ichi Satoh
PLoS One. 2011; 6(3): e17683. Published online 2011 March 24. doi: 10.1371/journal.pone.0017683
PMCID:
PMC3063780
Abstract Full Text PDF–641K Supplementary Material
Microarray-based gene expression profiles of silkworm brains
Ling Gan, Xilong Liu, Zhonghuai Xiang, Ningjia He
BMC Neurosci. 2011; 12: 8. Published online 2011 January 19. doi: 10.1186/1471-2202-12-8
PMCID:
PMC3032748
Abstract Full Text PDF–1.2M Supplementary Material
An ABC Transporter Mutation Is Correlated with Insect Resistance to Bacillus thuringiensis Cry1Ac Toxin
Linda J. Gahan, Yannick Pauchet, Heiko Vogel, David G. Heckel
PLoS Genet. 2010 December; 6(12): e1001248. Published online 2010 December 16. doi: 10.1371/journal.pgen.1001248
PMCID:
PMC3002984
Abstract Full Text PDF–1.9M Supplementary Material
The genomic underpinnings of apoptosis in the silkworm, Bombyx mori
Jin-Ye Zhang, Min-Hui Pan, Zhi-Ya Sun, Shu-Jing Huang, Zi-Shu Yu, Di Liu, Dan-Hong Zhao, Cheng Lu
BMC Genomics. 2010; 11: 611. Published online 2010 October 31. doi: 10.1186/1471-2164-11-611
PMCID:
PMC3091752
Abstract Full Text PDF–4.3M Supplementary Material
Genome-wide regulation of innate immunity by juvenile hormone and 20-hydroxyecdysone in the Bombyx fat body
Ling Tian, Enen Guo, Yupu Diao, Shun Zhou, Qin Peng, Yang Cao, Erjun Ling, Sheng Li
BMC Genomics. 2010; 11: 549. Published online 2010 October 9. doi: 10.1186/1471-2164-11-549
PMCID:
PMC3091698
Abstract Full Text PDF–1.1M Supplementary Material
Burst expansion, distribution and diversification of MITEs in the silkworm genome
Min-Jin Han, Yi-Hong Shen, Ying-Hui Gao, Li-Yong Chen, Zhong-Huai Xiang, Ze Zhang
BMC Genomics. 2010; 11: 520. Published online 2010 September 27. doi: 10.1186/1471-2164-11-520
PMCID:
PMC2997013
Abstract Full Text PDF–1.0M Supplementary Material
Analysis of the Basidiomycete Coprinopsis cinerea Reveals Conservation of the Core Meiotic Expression Program over Half a Billion Years of Evolution
Claire Burns, Jason E. Stajich, Andreas Rechtsteiner, Lorna Casselton, Sean E. Hanlon, Sarah K. Wilke, Oleksandr P. Savytskyy, Allen C. Gathman, Walt W. Lilly, Jason D. Lieb, Miriam E. Zolan, Patricia J. Pukkila
PLoS Genet. 2010 September; 6(9): e1001135. Published online 2010 September 23. doi: 10.1371/journal.pgen.1001135
PMCID:
PMC2944786
Abstract Full Text PDF–1.3M Supplementary Material
Construction and Application of an Electronic Spatiotemporal Expression Profile and Gene Ontology Analysis Platform Based on the EST Database of the Silkworm, Bombyx mori
Li- Ping Gan, Wen-Yu Zhang, Yan-Shan Niu, Li Xu, Jian Xi, Ming-Ming Ji, Shi-Qing Xu
J Insect Sci. 2010; 10: 114. Published online 2010 July 23. doi: 10.1673/031.010.11401
PMCID:
PMC3016962
Abstract Full Text PDF–785K
Repression of tyrosine hydroxylase is responsible for the sex-linked chocolate mutation of the silkworm, Bombyx mori
Chun Liu, Kimiko Yamamoto, Ting-Cai Cheng, Keiko Kadono-Okuda, Junko Narukawa, Shi-Ping Liu, Yu Han, Ryo Futahashi, Kurako Kidokoro, Hiroaki Noda, Isao Kobayashi, Toshiki Tamura, Akio Ohnuma, Yutaka Banno, Fang-Ying Dai, Zhong-Huai Xiang, Marian R. Goldsmith, Kazuei Mita, Qing-You Xia
Proc Natl Acad Sci U S A. 2010 July 20; 107(29): 12980–12985. Published online 2010 July 6. doi: 10.1073/pnas.1001725107
PMCID:
PMC2919899
Abstract Full Text PDF–985K Supplementary Material
Genome-wide identification and expression analysis of serine proteases and homologs in the silkworm Bombyx mori
Ping Zhao, Gen-Hong Wang, Zhao-Ming Dong, Jun Duan, Ping-Zhen Xu, Ting-Cai Cheng, Zhong-Huai Xiang, Qing-You Xia
BMC Genomics. 2010; 11: 405. Published online 2010 June 24. doi: 10.1186/1471-2164-11-405
PMCID:
PMC2996933
Abstract Full Text PDF–1.2M Supplementary Material
Expression profile of cuticular genes of silkworm, Bombyx mori
Jiubo Liang, Liang Zhang, Zhonghuai Xiang, Ningjia He
BMC Genomics. 2010; 11: 173. Published online 2010 March 15. doi: 10.1186/1471-2164-11-173
PMCID:
PMC2848646
Abstract Full Text PDF–1.9M Supplementary Material
MicroRNAs of Bombyx mori identified by Solexa sequencing
Shiping Liu, Dong Li, Qibin Li, Ping Zhao, Zhonghuai Xiang, Qingyou Xia
BMC Genomics. 2010; 11: 148. Published online 2010 March 3. doi: 10.1186/1471-2164-11-148
PMCID:
PMC2838851
Abstract Full Text PDF–2.7M Supplementary Material
MicroRNAs show diverse and dynamic expression patterns in multiple tissues of Bombyx mori
Shiping Liu, Song Gao, Danyu Zhang, Jiyun Yin, Zhonghuai Xiang, Qingyou Xia
BMC Genomics. 2010; 11: 85. Published online 2010 February 2. doi: 10.1186/1471-2164-11-85
PMCID:
PMC2835664
Abstract Full Text PDF–947K Supplementary Material
SilkDB v2.0: a platform for silkworm (Bombyx mori ) genome biology
Jun Duan, Ruiqiang Li, Daojun Cheng, Wei Fan, Xingfu Zha, Tingcai Cheng, Yuqian Wu, Jun Wang, Kazuei Mita, Zhonghuai Xiang, Qingyou Xia
Nucleic Acids Res. 2010 January; 38(Database issue): D453–D456. Published online 2010 January. doi: 10.1093/nar/gkp801
PMCID:
PMC2808975
Abstract Full Text PDF–3.9M
Yellow-e Determines the Color Pattern of Larval Head and Tail Spots of the Silkworm Bombyx mori
Katsuhiko Ito, Susumu Katsuma, Kimiko Yamamoto, Keiko Kadono-Okuda, Kazuei Mita, Toru Shimada
J Biol Chem. 2010 February 19; 285(8): 5624–5629. Published online 2009 December 8. doi: 10.1074/jbc.M109.035741
PMCID:
PMC2820789
Abstract Full Text
A Genome-Wide Survey for Host Response of Silkworm, Bombyx mori during Pathogen Bacillus bombyseptieus Infection
Lulin Huang, Tingcai Cheng, Pingzhen Xu, Daojun Cheng, Ting Fang, Qingyou Xia
PLoS One. 2009; 4(12): e8098. Published online 2009 December 1. doi: 10.1371/journal.pone.0008098
PMCID:
PMC2780328
Abstract Full Text PDF–2.1M Supplementary Material
Annotation and expression of carboxylesterases in the silkworm, Bombyx mori
Quan-You Yu, Cheng Lu, Wen-Le Li, Zhong-Huai Xiang, Ze Zhang
BMC Genomics. 2009; 10: 553. Published online 2009 November 24. doi: 10.1186/1471-2164-10-553
PMCID:
PMC2784812
Abstract Full Text PDF–618K Supplementary Material
Silkworm expression system as a platform technology in life science
Tatsuya Kato, Mizuho Kajikawa, Katsumi Maenaka, Enoch Y. Park
Appl Microbiol Biotechnol. 2010 January; 85(3): 459–470. Published online 2009 October 15. doi: 10.1007/s00253-009-2267-2
PMCID:
PMC2802491
Abstract Full Text PDF–335K
The small heat shock protein (sHSP) genes in the silkworm, Bombyx mori, and comparative analysis with other insect sHSP genes
Zi-Wen Li, Xue Li, Quan-You Yu, Zhong-Huai Xiang, Hirohisa Kishino, Ze Zhang
BMC Evol Biol. 2009; 9: 215. Published online 2009 August 28. doi: 10.1186/1471-2148-9-215
PMCID:
PMC2745388
Abstract Full Text PDF–1.2M Supplementary Material
The Odorant Binding Protein Gene Family from the Genome of Silkworm, Bombyx mori
Da-Ping Gong, Hui-Jie Zhang, Ping Zhao, Qing-You Xia, Zhong-Huai Xiang
BMC Genomics. 2009; 10: 332. Published online 2009 July 23. doi: 10.1186/1471-2164-10-332
PMCID:
PMC2722677
Abstract Full Text PDF–441K Supplementary Material
The Silkworm Z Chromosome Is Enriched in Testis-Specific Genes
K. P. Arunkumar, Kazuei Mita, J. Nagaraju
Genetics. 2009 June; 182(2): 493–501. doi: 10.1534/genetics.108.099994
PMCID:
PMC2691758
Abstract Full Text PDF–1.4M
The UDP-glucosyltransferase multigene family in Bombyx mori
Fei-Fei Huang, Chun-Li Chai, Ze Zhang, Zeng-Hu Liu, Fang-Yin Dai, Cheng Lu, Zhong-Huai Xiang
BMC Genomics. 2008; 9: 563. Published online 2008 November 27. doi: 10.1186/1471-2164-9-563
PMCID:
PMC2633020
Abstract Full Text PDF–639K Supplementary Material
Silkworm nucleotide databases - Current trends and future prospects
Nicole Koshy, Kangayam M Ponnuvel, Randhir K Sinha, SMH Qadri
Bioinformation. 2008; 2(7): 308–310. Published online 2008 April 19.
PMCID:
PMC2374376
Abstract Full Text PDF–44K
Surviving extreme polar winters by desiccation: clues from Arctic springtail (Onychiurus arcticus) EST libraries
Melody S Clark, Michael AS Thorne, Jelena Purać, Gordana Grubor-Lajšić, Michael Kube, Richard Reinhardt, M Roger Worland
BMC Genomics. 2007; 8: 475. Published online 2007 December 21. doi: 10.1186/1471-2164-8-475
PMCID:
PMC2246132
Abstract Full Text PDF–584K
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