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Modeling Neisseria meningitidis metabolism: from genome to metabolic fluxes
Gino JE Baart, Bert Zomer, Alex de Haan, Leo A van der Pol, E Coen Beuvery, Johannes Tramper, Dirk E Martens
Genome Biol. 2007; 8(7): R136. Published online 2007 July 6. doi: 10.1186/gb-2007-8-7-r136
PMCID:
PMC2323225
Abstract Full Text PDF–595K Supplementary Material

Is Cited by the Following 10 Articles in this Archive:

A metabolic network approach for the identification and prioritization of antimicrobial drug targets
Arvind K. Chavali, Kevin M. D’Auria, Erik L. Hewlett, Richard D. Pearson, Jason A. Papin
Trends Microbiol. Author manuscript; available in PMC 2013 March 1.
Published in final edited form as: Trends Microbiol. 2012 March; 20(3): 113–123. Published online 2012 January 31. doi: 10.1016/j.tim.2011.12.004
PMCID:
PMC3299924
Free in PMC on 2013/03/01
Interrogation of global mutagenesis data with a genome scale model of Neisseria meningitidis to assess gene fitness in vitro and in sera
Tom A Mendum, Jane Newcombe, Ahmad A Mannan, Andrzej M Kierzek, Johnjoe McFadden
Genome Biol. 2011; 12(12): R127. Published online 2011 December 30. doi: 10.1186/gb-2011-12-12-r127
PMCID:
PMC3334622
Abstract Full Text PDF–472K Supplementary Material
General metabolism of Laribacter hongkongensis: a genome-wide analysis
Shirly O Curreem, Jade L Teng, Herman Tse, Kwok-Yung Yuen, Susanna K Lau, Patrick C Woo
Cell Biosci. 2011; 1: 16. Published online 2011 April 19. doi: 10.1186/2045-3701-1-16
PMCID:
PMC3125206
Abstract Full Text PDF–5.4M
Expression of phosphofructokinase in Neisseria meningitidis
Gino J. E. Baart, Marc Langenhof, Bas van de Waterbeemd, Hendrik-Jan Hamstra, Bert Zomer, Leo A. van der Pol, E. C. Beuvery, Johannes Tramper, Dirk E. Martens
Microbiology. 2010 February; 156(Pt 2): 530–542. doi: 10.1099/mic.0.031641-0
PMCID:
PMC2890083
Abstract Full Text PDF–322K Supplementary Material
Accomplishments in genome-scale in silico modeling for industrial and medical biotechnology
Caroline B. Milne, Pan-Jun Kim, James A. Eddy, Nathan D. Price
Biotechnol J. Author manuscript; available in PMC 2011 August 24.
Published in final edited form as: Biotechnol J. 2009 December; 4(12): 1653–1670. doi: 10.1002/biot.200900234
PMCID:
PMC3160784
Abstract Full Text PDF–2.3M
Applications of genome-scale metabolic reconstructions
Matthew A Oberhardt, Bernhard Ø Palsson, Jason A Papin
Mol Syst Biol. 2009; 5: 320. Published online 2009 November 3. doi: 10.1038/msb.2009.77
PMCID:
PMC2795471
Abstract Full Text PDF–2.6M
The conservation and evolutionary modularity of metabolism
José M Peregrín-Alvarez, Chris Sanford, John Parkinson
Genome Biol. 2009; 10(6): R63. Published online 2009 June 12. doi: 10.1186/gb-2009-10-6-r63
PMCID:
PMC2718497
Abstract Full Text PDF–1.0M Supplementary Material
Constraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interaction
Anu Raghunathan, Jennifer Reed, Sookil Shin, Bernhard Palsson, Simon Daefler
BMC Syst Biol. 2009; 3: 38. Published online 2009 April 8. doi: 10.1186/1752-0509-3-38
PMCID:
PMC2678070
Abstract Full Text PDF–986K Supplementary Material
A Genome-Scale Metabolic Reconstruction of Mycoplasma genitalium, iPS189
Patrick F. Suthers, Madhukar S. Dasika, Vinay Satish Kumar, Gennady Denisov, John I. Glass, Costas D. Maranas
PLoS Comput Biol. 2009 February; 5(2): e1000285. Published online 2009 February 13. doi: 10.1371/journal.pcbi.1000285
PMCID:
PMC2633051
Abstract Full Text PDF–871K Supplementary Material
Genome-scale models of bacterial metabolism: reconstruction and applications
Maxime Durot, Pierre-Yves Bourguignon, Vincent Schachter
FEMS Microbiol Rev. 2009 January; 33(1): 164–190. Published online 2008 December. doi: 10.1111/j.1574-6976.2008.00146.x
PMCID:
PMC2704943
Abstract Full Text PDF–520K
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