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Modeling Neisseria meningitidis metabolism: from genome to metabolic fluxes
Gino JE Baart, Bert Zomer, Alex de Haan, Leo A van der Pol, E Coen Beuvery, Johannes Tramper, Dirk E Martens
Genome Biol. 2007; 8(7): R136. Published online 2007 July 6. doi: 10.1186/gb-2007-8-7-r136
PMCID:
PMC2323225
Abstract Full Text PDF–595K Supplementary Material
 Is Cited by the Following 8 Articles in this Archive:
General metabolism of Laribacter hongkongensis: a genome-wide analysis
Shirly O Curreem, Jade L Teng, Herman Tse, Kwok-Yung Yuen, Susanna K Lau, Patrick C Woo
Cell Biosci. 2011; 1: 16. Published online 2011 April 19. doi: 10.1186/2045-3701-1-16
PMCID:
PMC3125206
Abstract Full Text PDF–5.4M
Expression of phosphofructokinase in Neisseria meningitidis
Gino J. E. Baart, Marc Langenhof, Bas van de Waterbeemd, Hendrik-Jan Hamstra, Bert Zomer, Leo A. van der Pol, E. C. Beuvery, Johannes Tramper, Dirk E. Martens
Microbiology. 2010 February; 156(Pt 2): 530–542. doi: 10.1099/mic.0.031641-0
PMCID:
PMC2890083
Abstract Full Text PDF–322K Supplementary Material
Accomplishments in genome-scale in silico modeling for industrial and medical biotechnology
Caroline B. Milne, Pan-Jun Kim, James A. Eddy, Nathan D. Price
Biotechnol J. Author manuscript; available in PMC 2011 August 24.
Published in final edited form as: Biotechnol J. 2009 December; 4(12): 1653–1670. doi: 10.1002/biot.200900234
PMCID:
PMC3160784
Abstract Full Text PDF–2.3M
Applications of genome-scale metabolic reconstructions
Matthew A Oberhardt, Bernhard Ø Palsson, Jason A Papin
Mol Syst Biol. 2009; 5: 320. Published online 2009 November 3. doi: 10.1038/msb.2009.77
PMCID:
PMC2795471
Abstract Full Text PDF–2.6M
The conservation and evolutionary modularity of metabolism
José M Peregrín-Alvarez, Chris Sanford, John Parkinson
Genome Biol. 2009; 10(6): R63. Published online 2009 June 12. doi: 10.1186/gb-2009-10-6-r63
PMCID:
PMC2718497
Abstract Full Text PDF–1.0M Supplementary Material
Constraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interaction
Anu Raghunathan, Jennifer Reed, Sookil Shin, Bernhard Palsson, Simon Daefler
BMC Syst Biol. 2009; 3: 38. Published online 2009 April 8. doi: 10.1186/1752-0509-3-38
PMCID:
PMC2678070
Abstract Full Text PDF–986K Supplementary Material
A Genome-Scale Metabolic Reconstruction of Mycoplasma genitalium, iPS189
Patrick F. Suthers, Madhukar S. Dasika, Vinay Satish Kumar, Gennady Denisov, John I. Glass, Costas D. Maranas
PLoS Comput Biol. 2009 February; 5(2): e1000285. Published online 2009 February 13. doi: 10.1371/journal.pcbi.1000285
PMCID:
PMC2633051
Abstract Full Text PDF–871K Supplementary Material
Genome-scale models of bacterial metabolism: reconstruction and applications
Maxime Durot, Pierre-Yves Bourguignon, Vincent Schachter
FEMS Microbiol Rev. 2009 January; 33(1): 164–190. Published online 2008 December. doi: 10.1111/j.1574-6976.2008.00146.x
PMCID:
PMC2704943
Abstract Full Text PDF–520K
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