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Extensive genomic diversity and selective conservation of virulence-determinants in enterohemorrhagic Escherichia coli strains of O157 and non-O157 serotypes
Yoshitoshi Ogura, Tadasuke Ooka, Asadulghani, Jun Terajima, Jean-Philippe Nougayrède, Ken Kurokawa, Kousuke Tashiro, Toru Tobe, Keisuke Nakayama, Satoru Kuhara, Eric Oswald, Haruo Watanabe, Tetsuya Hayashi
Genome Biol. 2007; 8(7): R138. Published online 2007 July 10. doi: 10.1186/gb-2007-8-7-r138
PMCID:
PMC2323221
Abstract Full Text PDF–1.5M Supplementary Material
 Is Cited by the Following 16 Articles in this Archive:
Viral Ancestors of Antiviral Systems
Luis P. Villarreal
Viruses. 2011 October; 3(10): 1933–1958. Published online 2011 October 20. doi: 10.3390/v3101933
PMCID:
PMC3205389
Abstract Full Text PDF–231K
Phenotypic Diversity of Escherichia coli O157:H7 Strains Associated With the Plasmid O157
Ji Youn Lim, Joon Bae Hong, Haiqing Sheng, Smriti Shringi, Rajinder Kaul, Carolyn J. Hovde
J Microbiol. Author manuscript; available in PMC 2010 October 8.
Published in final edited form as: J Microbiol. 2010 June; 48(3): 347–357. Published online 2010 June 23. doi: 10.1007/s12275-010-9228-4
PMCID:
PMC2951829
Abstract Full Text PDF–588K Supplementary Material
Bacterial Effector Binding to Ribosomal Protein S3 Subverts NF-κB Function
Xiaofei Gao, Fengyi Wan, Kristina Mateo, Eduardo Callegari, Dan Wang, Wanyin Deng, Jose Puente, Feng Li, Michael S. Chaussee, B. Brett Finlay, Michael J. Lenardo, Philip R. Hardwidge
PLoS Pathog. 2009 December; 5(12): e1000708. Published online 2009 December 24. doi: 10.1371/journal.ppat.1000708
PMCID:
PMC2791202
Abstract Full Text PDF–769K Supplementary Material
Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli
Yoshitoshi Ogura, Tadasuke Ooka, Atsushi Iguchi, Hidehiro Toh, Md Asadulghani, Kenshiro Oshima, Toshio Kodama, Hiroyuki Abe, Keisuke Nakayama, Ken Kurokawa, Toru Tobe, Masahira Hattori, Tetsuya Hayashi
Proc Natl Acad Sci U S A. 2009 October 20; 106(42): 17939–17944. Published online 2009 October 6. doi: 10.1073/pnas.0903585106
PMCID:
PMC2764950
Abstract Full Text PDF–2.2M Supplementary Material
Hfq negatively regulates type III secretion in EHEC and several other pathogens
Elizabeth A. Shakhnovich, Brigid M. Davis, Matthew K. Waldor
Mol Microbiol. Author manuscript; available in PMC 2010 October 1.
Published in final edited form as: Mol Microbiol. 2009 October; 74(2): 347–363. Published online 2009 August 24. doi: 10.1111/j.1365-2958.2009.06856.x
PMCID:
PMC2765575
Abstract Full Text PDF–1.4M
Comparative genomic analyses of Streptococcus mutans provide insights into chromosomal shuffling and species-specific content
Fumito Maruyama, Mitsuhiko Kobata, Ken Kurokawa, Keishin Nishida, Atsuo Sakurai, Kazuhiko Nakano, Ryota Nomura, Shigetada Kawabata, Takashi Ooshima, Kenta Nakai, Masahira Hattori, Shigeyuki Hamada, Ichiro Nakagawa
BMC Genomics. 2009; 10: 358. Published online 2009 August 5. doi: 10.1186/1471-2164-10-358
PMCID:
PMC2907686
Abstract Full Text PDF–1.5M Supplementary Material
Genomic diversity of pathogenic Escherichia coli of the EHEC 2 clonal complex
Galeb S Abu-Ali, David W Lacher, Lukas M Wick, Weihong Qi, Thomas S Whittam
BMC Genomics. 2009; 10: 296. Published online 2009 July 3. doi: 10.1186/1471-2164-10-296
PMCID:
PMC2713265
Abstract Full Text PDF–813K Supplementary Material
In silico genomic analyses reveal three distinct lineages of Escherichia coli O157:H7, one of which is associated with hyper-virulence
Chad R Laing, Cody Buchanan, Eduardo N Taboada, Yongxiang Zhang, Mohamed A Karmali, James E Thomas, Victor PJ Gannon
BMC Genomics. 2009; 10: 287. Published online 2009 June 29. doi: 10.1186/1471-2164-10-287
PMCID:
PMC2719669
Abstract Full Text PDF–610K Supplementary Material
Enterohemorrhagic Escherichia coli O157[ratio]H7 Gene Expression Profiling in Response to Growth in the Presence of Host Epithelia
Narveen Jandu, Nathan K. L. Ho, Kevin A. Donato, Mohamed A. Karmali, Mariola Mascarenhas, Simon P. Duffy, Chetankumar Tailor, Philip M. Sherman
PLoS ONE. 2009; 4(3): e4889. Published online 2009 March 18. doi: 10.1371/journal.pone.0004889
PMCID:
PMC2654852
Abstract Full Text PDF–745K Supplementary Material
Short-term genome evolution of Listeria monocytogenes in a non-controlled environment
Renato H Orsi, Mark L Borowsky, Peter Lauer, Sarah K Young, Chad Nusbaum, James E Galagan, Bruce W Birren, Reid A Ivy, Qi Sun, Lewis M Graves, Bala Swaminathan, Martin Wiedmann
BMC Genomics. 2008; 9: 539. Published online 2008 November 13. doi: 10.1186/1471-2164-9-539
PMCID:
PMC2642827
Abstract Full Text PDF–574K Supplementary Material
Genomic islands: tools of bacterial horizontal gene transfer and evolution
Mario Juhas, Jan Roelof van der Meer, Muriel Gaillard, Rosalind M Harding, Derek W Hood, Derrick W Crook
FEMS Microbiol Rev. 2009 March; 33(2): 376–393. Published online 2008 October 30. doi: 10.1111/j.1574-6976.2008.00136.x
PMCID:
PMC2704930
Abstract Full Text PDF–296K
Chlamydia trachomatis diversity viewed as a tissue-specific coevolutionary arms race
Alexandra Nunes, Paulo J Nogueira, Maria J Borrego, João P Gomes
Genome Biol. 2008; 9(10): R153. Published online 2008 October 23. doi: 10.1186/gb-2008-9-10-r153
PMCID:
PMC2760880
Abstract Full Text PDF–951K Supplementary Material
Rapid Determination of Escherichia coli O157:H7 Lineage Types and Molecular Subtypes by Using Comparative Genomic Fingerprinting
Chad Laing, Crystal Pegg, Davis Yawney, Kim Ziebell, Marina Steele, Roger Johnson, James E. Thomas, Eduardo N. Taboada, Yongxiang Zhang, Victor P. J. Gannon
Appl Environ Microbiol. 2008 November; 74(21): 6606–6615. Published online 2008 September 12. doi: 10.1128/AEM.00985-08
PMCID:
PMC2576696
Abstract Full Text PDF–979K
Systematic Identification and Sequence Analysis of the Genomic Islands of the Enteropathogenic Escherichia coli Strain B171-8 by the Combined Use of Whole-Genome PCR Scanning and Fosmid Mapping
Yoshitoshi Ogura, Hiroyuki Abe, Keisuke Katsura, Ken Kurokawa, Md Asadulghani, Atsushi Iguchi, Tadasuke Ooka, Keisuke Nakayama, Atsushi Yamashita, Masahira Hattori, Toru Tobe, Tetsuya Hayashi
J Bacteriol. 2008 November; 190(21): 6948–6960. Published online 2008 August 29. doi: 10.1128/JB.00625-08
PMCID:
PMC2580699
Abstract Full Text PDF–2.2M Supplementary Material
Genotypic Characterization and Prevalence of Virulence Factors among Canadian Escherichia coli O157:H7 Strains
Kim Ziebell, Marina Steele, Yongxiang Zhang, Andrew Benson, Eduardo N. Taboada, Chad Laing, Scott McEwen, Bruce Ciebin, Roger Johnson, Victor Gannon
Appl Environ Microbiol. 2008 July; 74(14): 4314–4323. Published online 2008 May 16. doi: 10.1128/AEM.02821-07
PMCID:
PMC2493177
Abstract Full Text PDF–499K Supplementary Material
Characterization of the NleF effector protein from attaching and effacing bacterial pathogens
Frank Echtenkamp, Wanyin Deng, Mark E. Wickham, Alejandra Vazquez, Jose L. Puente, Ajitha Thanabalasuriar, Samantha Gruenheid, B. Brett Finlay, Philip R. Hardwidge
FEMS Microbiol Lett. Author manuscript; available in PMC 2009 March 19.
Published in final edited form as: FEMS Microbiol Lett. 2008 April; 281(1): 98–107. doi: 10.1111/j.1574-6968.2008.01088.x
PMCID:
PMC2657846
Abstract Full Text PDF–988K
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