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A process for analysis of microarray comparative genomics hybridisation studies for bacterial genomes
Ben Carter, Guanghui Wu, Martin J Woodward, Muna F Anjum
BMC Genomics. 2008; 9: 53. Published online 2008 January 29. doi: 10.1186/1471-2164-9-53
PMCID:
PMC2262894
Abstract Full Text PDF–1.1M

Is Cited by the Following 8 Articles in this Archive:

Genomotyping of Coxiella burnetii Using Microarrays Reveals a Conserved Genomotype for Hard Tick Isolates
Quentin Leroy, Fabrice Armougom, Pascal Barbry, Didier Raoult
PLoS One. 2011; 6(10): e25781. Published online 2011 October 25. doi: 10.1371/journal.pone.0025781
PMCID:
PMC3201959
Abstract Full Text PDF–270K Supplementary Material
Phylogenetic, Microbiological, and Glycoside Hydrolase Diversities within the Extremely Thermophilic, Plant Biomass-Degrading Genus Caldicellulosiruptor
Sara E. Blumer-Schuette, Derrick L. Lewis, Robert M. Kelly
Appl Environ Microbiol. 2010 December; 76(24): 8084–8092. Published online 2010 October 22. doi: 10.1128/AEM.01400-10
PMCID:
PMC3008241
Abstract Full Text PDF–1.1M
Probing the pan-genome of Listeria monocytogenes: new insights into intraspecific niche expansion and genomic diversification
Xiangyu Deng, Adam M Phillippy, Zengxin Li, Steven L Salzberg, Wei Zhang
BMC Genomics. 2010; 11: 500. Published online 2010 September 16. doi: 10.1186/1471-2164-11-500
PMCID:
PMC2996996
Abstract Full Text PDF–3.2M Supplementary Material
New methods to analyse microarray data that partially lack a reference signal
Neeltje Carpaij, Ad C Fluit, Jodi A Lindsay, Marc JM Bonten, Rob JL Willems
BMC Genomics. 2009; 10: 522. Published online 2009 November 13. doi: 10.1186/1471-2164-10-522
PMCID:
PMC2779823
Abstract Full Text PDF–303K
Microarray Comparative Genomic Hybridisation Analysis Incorporating Genomic Organisation, and Application to Enterobacterial Plant Pathogens
Leighton Pritchard, Hui Liu, Clare Booth, Emma Douglas, Patrice François, Jacques Schrenzel, Peter E. Hedley, Paul R. J. Birch, Ian K. Toth
PLoS Comput Biol. 2009 August; 5(8): e1000473. Published online 2009 August 21. doi: 10.1371/journal.pcbi.1000473
PMCID:
PMC2718846
Abstract Full Text PDF–874K Supplementary Material
Comparative genomics of Enterococcus faecalis from healthy Norwegian infants
Margrete Solheim, Ågot Aakra, Lars G Snipen, Dag A Brede, Ingolf F Nes
BMC Genomics. 2009; 10: 194. Published online 2009 April 24. doi: 10.1186/1471-2164-10-194
PMCID:
PMC2680900
Abstract Full Text PDF–935K Supplementary Material
Improved analysis of bacterial CGH data beyond the log-ratio paradigm
Lars Snipen, Otto L Nyquist, Margrete Solheim, Ågot Aakra, Ingolf F Nes
BMC Bioinformatics. 2009; 10: 91. Published online 2009 March 19. doi: 10.1186/1471-2105-10-91
PMCID:
PMC2679023
Abstract Full Text PDF–2.4M
Optimal control and analysis of two-color genomotyping experiments using bacterial multistrain arrays
Francisco R Pinto, Sandra I Aguiar, J Melo-Cristino, Mário Ramirez
BMC Genomics. 2008; 9: 230. Published online 2008 May 19. doi: 10.1186/1471-2164-9-230
PMCID:
PMC2410139
Abstract Full Text PDF–267K Supplementary Material
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