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J Bacteriol. 1994 Jan; 176(1): 1–6.
PMCID: PMC205007

The winds of (evolutionary) change: breathing new life into microbiology.

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Selected References

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  • Achenbach-Richter L, Gupta R, Stetter KO, Woese CR. Were the original eubacteria thermophiles? Syst Appl Microbiol. 1987;9:34–39. [PubMed]
  • Achenbach-Richter L, Gupta R, Zillig W, Woese CR. Rooting the archaebacterial tree: the pivotal role of Thermococcus celer in archaebacterial evolution. Syst Appl Microbiol. 1988;10:231–240. [PubMed]
  • Cech TR, Tanner NK, Tinoco I, Jr, Weir BR, Zuker M, Perlman PS. Secondary structure of the Tetrahymena ribosomal RNA intervening sequence: structural homology with fungal mitochondrial intervening sequences. Proc Natl Acad Sci U S A. 1983 Jul;80(13):3903–3907. [PMC free article] [PubMed]
  • DeLong EF. Archaea in coastal marine environments. Proc Natl Acad Sci U S A. 1992 Jun 15;89(12):5685–5689. [PMC free article] [PubMed]
  • DeLong EF, Wickham GS, Pace NR. Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells. Science. 1989 Mar 10;243(4896):1360–1363. [PubMed]
  • Edman JC, Kovacs JA, Masur H, Santi DV, Elwood HJ, Sogin ML. Ribosomal RNA sequence shows Pneumocystis carinii to be a member of the fungi. Nature. 1988 Aug 11;334(6182):519–522. [PubMed]
  • Felsenstein J. Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol. 1981;17(6):368–376. [PubMed]
  • Fox GE, Stackebrandt E, Hespell RB, Gibson J, Maniloff J, Dyer TA, Wolfe RS, Balch WE, Tanner RS, Magrum LJ, et al. The phylogeny of prokaryotes. Science. 1980 Jul 25;209(4455):457–463. [PubMed]
  • Fox GE, Woese CR. 5S RNA secondary structure. Nature. 1975 Aug 7;256(5517):505–507. [PubMed]
  • Fuhrman JA, McCallum K, Davis AA. Novel major archaebacterial group from marine plankton. Nature. 1992 Mar 12;356(6365):148–149. [PubMed]
  • Gogarten JP, Kibak H, Dittrich P, Taiz L, Bowman EJ, Bowman BJ, Manolson MF, Poole RJ, Date T, Oshima T, et al. Evolution of the vacuolar H+-ATPase: implications for the origin of eukaryotes. Proc Natl Acad Sci U S A. 1989 Sep;86(17):6661–6665. [PMC free article] [PubMed]
  • Guthrie C, Patterson B. Spliceosomal snRNAs. Annu Rev Genet. 1988;22:387–419. [PubMed]
  • Iwabe N, Kuma K, Hasegawa M, Osawa S, Miyata T. Evolutionary relationship of archaebacteria, eubacteria, and eukaryotes inferred from phylogenetic trees of duplicated genes. Proc Natl Acad Sci U S A. 1989 Dec;86(23):9355–9359. [PMC free article] [PubMed]
  • James BD, Olsen GJ, Liu JS, Pace NR. The secondary structure of ribonuclease P RNA, the catalytic element of a ribonucleoprotein enzyme. Cell. 1988 Jan 15;52(1):19–26. [PubMed]
  • Kaine BP. Structure of the archaebacterial 7S RNA molecule. Mol Gen Genet. 1990 May;221(3):315–321. [PubMed]
  • Larsen N, Olsen GJ, Maidak BL, McCaughey MJ, Overbeek R, Macke TJ, Marsh TL, Woese CR. The ribosomal database project. Nucleic Acids Res. 1993 Jul 1;21(13):3021–3023. [PMC free article] [PubMed]
  • Larsen N, Zwieb C. SRP-RNA sequence alignment and secondary structure. Nucleic Acids Res. 1991 Jan 25;19(2):209–215. [PMC free article] [PubMed]
  • Michel F, Dujon B. Conservation of RNA secondary structures in two intron families including mitochondrial-, chloroplast- and nuclear-encoded members. EMBO J. 1983;2(1):33–38. [PMC free article] [PubMed]
  • Nishikawa K, Takemura S. Nucleotide sequence of 5 S RNA from Torulopsis utilis. FEBS Lett. 1974 Mar 15;40(1):106–109. [PubMed]
  • Noller HF, Kop J, Wheaton V, Brosius J, Gutell RR, Kopylov AM, Dohme F, Herr W, Stahl DA, Gupta R, et al. Secondary structure model for 23S ribosomal RNA. Nucleic Acids Res. 1981 Nov 25;9(22):6167–6189. [PMC free article] [PubMed]
  • Stahl DA, Urbance JW. The division between fast- and slow-growing species corresponds to natural relationships among the mycobacteria. J Bacteriol. 1990 Jan;172(1):116–124. [PMC free article] [PubMed]
  • STANIER RY, VAN NIEL CB. The concept of a bacterium. Arch Mikrobiol. 1962;42:17–35. [PubMed]
  • Woese CR. Bacterial evolution. Microbiol Rev. 1987 Jun;51(2):221–271. [PMC free article] [PubMed]
  • Woese CR, Fox GE. Phylogenetic structure of the prokaryotic domain: the primary kingdoms. Proc Natl Acad Sci U S A. 1977 Nov;74(11):5088–5090. [PMC free article] [PubMed]
  • Woese CR, Fox GE. The concept of cellular evolution. J Mol Evol. 1977 Sep 20;10(1):1–6. [PubMed]
  • Woese CR, Kandler O, Wheelis ML. Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. Proc Natl Acad Sci U S A. 1990 Jun;87(12):4576–4579. [PMC free article] [PubMed]
  • Woese CR, Magrum LJ, Gupta R, Siegel RB, Stahl DA, Kop J, Crawford N, Brosius J, Gutell R, Hogan JJ, et al. Secondary structure model for bacterial 16S ribosomal RNA: phylogenetic, enzymatic and chemical evidence. Nucleic Acids Res. 1980 May 24;8(10):2275–2293. [PMC free article] [PubMed]
  • Zuckerkandl E, Pauling L. Molecules as documents of evolutionary history. J Theor Biol. 1965 Mar;8(2):357–366. [PubMed]

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