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A systematic comparative and structural analysis of protein phosphorylation sites based on the mtcPTM database
José L Jiménez, Björn Hegemann, James RA Hutchins, Jan-Michael Peters, Richard Durbin
Genome Biol. 2007; 8(5): R90. Published online 2007 May 23. doi: 10.1186/gb-2007-8-5-r90
PMCID:
PMC1929158
Abstract Full Text PDF–1.3M Supplementary Material

Is Cited by the Following 11 Articles in this Archive:

The p53 cofactor Strap exhibits an unexpected TPR motif and oligonucleotide-binding (OB)–fold structure
Cassandra J. Adams, Ashley C. W. Pike, Sandra Maniam, Timothy D. Sharpe, Amanda S. Coutts, Stefan Knapp, Nicholas B. La Thangue, Alex N. Bullock
Proc Natl Acad Sci U S A. 2012 March 6; 109(10): 3778-3783. Published online 2012 February 23. doi: 10.1073/pnas.1113731109
PMCID:
PMC3309724
Abstract Full Text PDF–1.6M Supplementary Material
Phosphosite Mapping of P-type Plasma Membrane H+-ATPase in Homologous and Heterologous Environments
Elena L. Rudashevskaya, Juanying Ye, Ole N. Jensen, Anja T. Fuglsang, Michael G. Palmgren
J Biol Chem. 2012 February 10; 287(7): 4904–4913. Published online 2011 December 15. doi: 10.1074/jbc.M111.307264
PMCID:
PMC3281613
Free in PMC on 2013/02/10
Phosphorylation in protein-protein binding: effect on stability and function
Hafumi Nishi, Kosuke Hashimoto, Anna R. Panchenko
Structure. Author manuscript; available in PMC 2012 December 7.
Published in final edited form as: Structure. 2011 December 7; 19(12): 1807–1815. doi: 10.1016/j.str.2011.09.021
PMCID:
PMC3240861
Free in PMC on 2012/12/07
The Phosphoproteomes of Plasmodium falciparum and Toxoplasma gondii reveal unusual adaptations within and beyond the parasites’ boundaries
Moritz Treeck, John L. Sanders, Joshua E. Elias, John C. Boothroyd
Cell Host Microbe. Author manuscript; available in PMC 2012 October 4.
Published in final edited form as: Cell Host Microbe. 2011 October 20; 10(4): 410–419. doi: 10.1016/j.chom.2011.09.004
PMCID:
PMC3254672
Free in PMC on 2012/10/04
Phospho3D 2.0: an enhanced database of three-dimensional structures of phosphorylation sites
Andreas Zanzoni, Daniel Carbajo, Francesca Diella, Pier Federico Gherardini, Anna Tramontano, Manuela Helmer-Citterich, Allegra Via
Nucleic Acids Res. 2011 January; 39(Database issue): D268–D271. Published online 2010 October 21. doi: 10.1093/nar/gkq936
PMCID:
PMC3013787
Abstract Full Text PDF–2.4M
Phosphorylated and Nonphosphorylated Serine and Threonine Residues Evolve at Different Rates in Mammals
Sean Chun-Chang Chen, Feng-Chi Chen, Wen-Hsiung Li
Mol Biol Evol. 2010 November; 27(11): 2548–2554. Published online 2010 June 9. doi: 10.1093/molbev/msq142
PMCID:
PMC2955733
Abstract Full Text PDF–437K Supplementary Material
Cooperativity within proximal phosphorylation sites is revealed from large-scale proteomics data
Regev Schweiger, Michal Linial
Biol Direct. 2010; 5: 6. Published online 2010 January 26. doi: 10.1186/1745-6150-5-6
PMCID:
PMC2828979
Abstract Full Text PDF–1.5M Supplementary Material
Phosphoproteomics by Mass Spectrometry: insights, implications, applications, and limitations
Viveka Mayya, David K. Han
Expert Rev Proteomics. Author manuscript; available in PMC 2010 October 1.
Published in final edited form as: Expert Rev Proteomics. 2009 December; 6(6): 605–618. doi: 10.1586/epr.09.84
PMCID:
PMC2931417
Abstract Full Text PDF–1.9M
Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins
Pawel Durek, Christian Schudoma, Wolfram Weckwerth, Joachim Selbig, Dirk Walther
BMC Bioinformatics. 2009; 10: 117. Published online 2009 April 21. doi: 10.1186/1471-2105-10-117
PMCID:
PMC2683816
Abstract Full Text PDF–1.1M Supplementary Material
Proteomics studies confirm the presence of alternative protein isoforms on a large scale
Michael L Tress, Bernd Bodenmiller, Ruedi Aebersold, Alfonso Valencia
Genome Biol. 2008; 9(11): R162. Published online 2008 November 18. doi: 10.1186/gb-2008-9-11-r162
PMCID:
PMC2614494
Abstract Full Text PDF–2.6M Supplementary Material
PHOSIDA (phosphorylation site database): management, structural and evolutionary investigation, and prediction of phosphosites
Florian Gnad, Shubin Ren, Juergen Cox, Jesper V Olsen, Boris Macek, Mario Oroshi, Matthias Mann
Genome Biol. 2007; 8(11): R250. Published online 2007 November 26. doi: 10.1186/gb-2007-8-11-r250
PMCID:
PMC2258193
Abstract Full Text PDF–2.0M Supplementary Material
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