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Zhengdong D Zhang, Joel Rozowsky, Hugo YK Lam, Jiang Du, Michael Snyder, Mark Gerstein
Genome Biol. 2007; 8(5): R81. Published online 2007 May 14. doi: 10.1186/gb-2007-8-5-r81
PMCID:
PMC1929149
 Is Cited by the Following 20 Articles in this Archive:
Fabien Cottier, Martine Raymond, Oliver Kurzai, Marianne Bolstad, Worraanong Leewattanapasuk, Claudia Jiménez-López, Michael C. Lorenz, Dominique Sanglard, Libuše Váchová, Norman Pavelka, Zdena Palková, Fritz A. Mühlschlegel
PLoS Pathog. 2012 January; 8(1): e1002485. Published online 2012 January 12. doi: 10.1371/journal.ppat.1002485
PMCID:
PMC3257301
Jose M. Muiño, Marlous Hoogstraat, Roeland C. H. J. van Ham, Aalt D. J. van Dijk
Nucleic Acids Res. 2011 July 1; 39(Web Server issue): W524–W527. Published online 2011 May 24. doi: 10.1093/nar/gkr373
PMCID:
PMC3125775
Sabrina Schubert, Katherine S. Barker, Sadri Znaidi, Sabrina Schneider, Franziska Dierolf, Nico Dunkel, Malika Aïd, Geneviève Boucher, P. David Rogers, Martine Raymond, Joachim Morschhäuser
Antimicrob Agents Chemother. 2011 May; 55(5): 2212–2223. doi: 10.1128/AAC.01343-10
PMCID:
PMC3088179
Ghia M. Euskirchen, Raymond K. Auerbach, Eugene Davidov, Tara A. Gianoulis, Guoneng Zhong, Joel Rozowsky, Nitin Bhardwaj, Mark B. Gerstein, Michael Snyder
PLoS Genet. 2011 March; 7(3): e1002008. Published online 2011 March 3. doi: 10.1371/journal.pgen.1002008
PMCID:
PMC3048368
Jianti Zheng, Denghui Xing, Xiaohui Wu, Yingjia Shen, Diana M. Kroll, Guoli Ji, Qingshun Quinn Li
PLoS One. 2011; 6(2): e14719. Published online 2011 February 25. doi: 10.1371/journal.pone.0014719
PMCID:
PMC3045369
Yiwen Chen, Clifford A Meyer, Tao Liu, Wei Li, Jun S Liu, Xiaole Shirley Liu
Genome Biol. 2011; 12(2): R11. Published online 2011 February 1. doi: 10.1186/gb-2011-12-2-r11
PMCID:
PMC3188793
Hao Wu, Hongkai Ji
Bioinformatics. 2010 August 1; 26(15): 1864–1870. Published online 2010 June 15. doi: 10.1093/bioinformatics/btq314
PMCID:
PMC2905557
Ranjit Kumar, Pratik Shah, Edwin Swiatlo, Shane C Burgess, Mark L Lawrence, Bindu Nanduri
BMC Genomics. 2010; 11: 350. Published online 2010 June 3. doi: 10.1186/1471-2164-11-350
PMCID:
PMC2887815
Jason A. Greenbaum, Erika Assarsson, Jo L. Chung, Steven Head, Alessandro Sette, Bjoern Peters
PLoS One. 2010; 5(4): e9993. Published online 2010 April 1. doi: 10.1371/journal.pone.0009993
PMCID:
PMC2848623
Allon Canaan, Izhak Haviv, Alexander E. Urban, Vincent P. Schulz, Steve Hartman, Zhengdong Zhang, Dean Palejev, Albert B. Deisseroth, Jill Lacy, Michael Snyder, Mark Gerstein, Sherman M. Weissman
Proc Natl Acad Sci U S A. 2009 December 29; 106(52): 22421–22426. Published online 2009 December 22. doi: 10.1073/pnas.0911676106
PMCID:
PMC2799695
Li Ni, Can Bruce, Christopher Hart, Justine Leigh-Bell, Daniel Gelperin, Lara Umansky, Mark B. Gerstein, Michael Snyder
Genes Dev. 2009 June 1; 23(11): 1351–1363. doi: 10.1101/gad.1781909
PMCID:
PMC2701586
Sadri Znaidi, Katherine S. Barker, Sandra Weber, Anne-Marie Alarco, Teresa T. Liu, Geneviève Boucher, P. David Rogers, Martine Raymond
Eukaryot Cell. 2009 June; 8(6): 806–820. Published online 2009 April 24. doi: 10.1128/EC.00002-09
PMCID:
PMC2698309
Paul G. Giresi, Jason D. Lieb
Methods. Author manuscript; available in PMC 2010 July 1.
Published in final edited form as: Methods. 2009 July; 48(3): 233–239. Published online 2009 March 18. doi: 10.1016/j.ymeth.2009.03.003
PMCID:
PMC2710428
Debayan Datta, Hongyu Zhao
BMC Bioinformatics. 2009; 10: 23. Published online 2009 January 19. doi: 10.1186/1471-2105-10-23
PMCID:
PMC2637844
Joel Rozowsky, Ghia Euskirchen, Raymond K. Auerbach, Zhengdong D. Zhang, Theodore Gibson, Robert Bjornson, Nicholas Carriero, Michael Snyder, Mark B. Gerstein
Nat Biotechnol. Author manuscript; available in PMC 2010 August 20.
Published in final edited form as: Nat Biotechnol. 2009 January; 27(1): 66–75. Published online 2009 January 4. doi: 10.1038/nbt.1518
PMCID:
PMC2924752
Hongkai Ji, Hui Jiang, Wenxiu Ma, David S. Johnson, Richard M. Myers, Wing H. Wong
Nat Biotechnol. Author manuscript; available in PMC 2009 May 1.
Published in final edited form as: Nat Biotechnol. 2008 November; 26(11): 1293–1300. Published online 2008 November 2. doi: 10.1038/nbt.1505
PMCID:
PMC2596672
Zhengdong D. Zhang, Joel Rozowsky, Michael Snyder, Joseph Chang, Mark Gerstein
PLoS Comput Biol. 2008 August; 4(8): e1000158. Published online 2008 August 22. doi: 10.1371/journal.pcbi.1000158
PMCID:
PMC2507756
Zheng Lian, Alexander Karpikov, Jin Lian, Milind C. Mahajan, Stephen Hartman, Mark Gerstein, Michael Snyder, Sherman M. Weissman
Genome Res. 2008 August; 18(8): 1224–1237. doi: 10.1101/gr.075804.107
PMCID:
PMC2493437
David S. Johnson, Wei Li, D. Benjamin Gordon, Arindam Bhattacharjee, Bo Curry, Jayati Ghosh, Leonardo Brizuela, Jason S. Carroll, Myles Brown, Paul Flicek, Christoph M. Koch, Ian Dunham, Mark Bieda, Xiaoqin Xu, Peggy J. Farnham, Philipp Kapranov, David A. Nix, Thomas R. Gingeras, Xinmin Zhang, Heather Holster, Nan Jiang, Roland D. Green, Jun S. Song, Scott A. McCuine, Elizabeth Anton, Loan Nguyen, Nathan D. Trinklein, Zhen Ye, Keith Ching, David Hawkins, Bing Ren, Peter C. Scacheri, Joel Rozowsky, Alexander Karpikov, Ghia Euskirchen, Sherman Weissman, Mark Gerstein, Michael Snyder, Annie Yang, Zarmik Moqtaderi, Heather Hirsch, Hennady P. Shulha, Yutao Fu, Zhiping Weng, Kevin Struhl, Richard M. Myers, Jason D. Lieb, X. Shirley Liu
Genome Res. 2008 March; 18(3): 393–403. doi: 10.1101/gr.7080508
PMCID:
PMC2259103
X. Shirley Liu
PLoS Comput Biol. 2007 October; 3(10): e183. Published online 2007 October 26. doi: 10.1371/journal.pcbi.0030183
PMCID:
PMC2041964