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A Three Stage Integrative Pathway Search (TIPS©) framework to identify toxicity relevant genes and pathways
Zheng Li, Shireesh Srivastava, Sheenu Mittal, Xuerui Yang, Lufang Sheng, Christina Chan
BMC Bioinformatics. 2007; 8: 202. Published online 2007 June 14. doi: 10.1186/1471-2105-8-202
PMCID:
PMC1906836
Abstract Full Text PDF–746K Supplementary Material

Is Cited by the Following 6 Articles in this Archive:

Synergy Analysis Reveals Association between Insulin Signaling and Desmoplakin Expression in Palmitate Treated HepG2 Cells
Xuewei Wang, Aritro Nath, Xuerui Yang, Amanda Portis, S. Patrick Walton, Christina Chan
PLoS One. 2011; 6(11): e28138. Published online 2011 November 23. doi: 10.1371/journal.pone.0028138
PMCID:
PMC3223234
Abstract Full Text PDF–1.8M Supplementary Material
Molecular mechanism by which palmitate inhibits PKR autophosphorylation
Hyunju Cho, Shayantani Mukherjee, Pratheeba Palasuberniam, Lisa Pillow, Betul Bilgin, Catherine Nezich, S. Patrick Walton, Michael Feig, Christina Chan
Biochemistry. Author manuscript; available in PMC 2012 February 15.
Published in final edited form as: Biochemistry. 2011 February 15; 50(6): 1110–1119. Published online 2011 January 24. doi: 10.1021/bi101923r
PMCID:
PMC3035770
Abstract Full Text PDF–1.0M Supplementary Material
Reconstruct modular phenotype-specific gene networks by knowledge-driven matrix factorization
Xuerui Yang, Yang Zhou, Rong Jin, Christina Chan
Bioinformatics. 2009 September 1; 25(17): 2236–2243. Published online 2009 June 19. doi: 10.1093/bioinformatics/btp376
PMCID:
PMC2800351
Abstract Full Text PDF–248K Supplementary Material
Systems biology and functional genomics approaches for the identification of cellular responses to drug toxicity
Alison Hege Harrill, Ivan Rusyn
Expert Opin Drug Metab Toxicol. Author manuscript; available in PMC 2009 January 6.
Published in final edited form as: Expert Opin Drug Metab Toxicol. 2008 November; 4(11): 1379–1389. doi: 10.1517/17425255.4.11.1379
PMCID:
PMC2614284
Abstract Full Text PDF–611K
Experimental and Computational Studies Investigating Trehalose Protection of HepG2 Cells from Palmitate-Induced Toxicity
Sukit Leekumjorn, Yifei Wu, Amadeu K. Sum, Christina Chan
Biophys J. 2008 April 1; 94(7): 2869–2883. Published online 2007 December 20. doi: 10.1529/biophysj.107.120717
PMCID:
PMC2267146
Abstract Full Text PDF–1.6M
Identification of genes that regulate multiple cellular processes/responses in the context of lipotoxicity to hepatoma cells
Shireesh Srivastava, Zheng Li, Xuerui Yang, Matthew Yedwabnick, Stephen Shaw, Christina Chan
BMC Genomics. 2007; 8: 364. Published online 2007 October 9. doi: 10.1186/1471-2164-8-364
PMCID:
PMC2110894
Abstract Full Text PDF–550K Supplementary Material
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