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Comparative genomics using Fugu reveals insights into regulatory subfunctionalization
Adam Woolfe, Greg Elgar
Genome Biol. 2007; 8(4): R53. Published online 2007 April 11. doi: 10.1186/gb-2007-8-4-r53
PMCID:
PMC1896008
Abstract Full Text PDF–1.9M Supplementary Material

Is Cited by the Following 12 Articles in this Archive:

Efficient large-scale protein sequence comparison and gene matching to identify orthologs and co-orthologs
Khalid Mahmood, Geoffrey I. Webb, Jiangning Song, James C. Whisstock, Arun S. Konagurthu
Nucleic Acids Res. 2012 March; 40(6): e44. Published online 2011 December 29. doi: 10.1093/nar/gkr1261
PMCID:
PMC3315314
Abstract Full Text PDF–700K
Minor change, major difference: divergent functions of highly conserved cis-regulatory elements subsequent to whole genome duplication events
Debbie K. Goode, Heather A. Callaway, Gustavo A. Cerda, Katharine E. Lewis, Greg Elgar
Development. 2011 March 1; 138(5): 879–884. doi: 10.1242/dev.055996
PMCID:
PMC3035092
Abstract Full Text Supplementary Material
Phylogenetic and regulatory region analysis of Wnt5 genes reveals conservation of a regulatory module with putative implication in pancreas development
Maria Kapasa, Stilianos Arhondakis, Sophia Kossida
Biol Direct. 2010; 5: 49. Published online 2010 August 4. doi: 10.1186/1745-6150-5-49
PMCID:
PMC2922100
Abstract Full Text PDF–1.5M Supplementary Material
Transcriptional Rewiring of the Sex Determining dmrt1 Gene Duplicate by Transposable Elements
Amaury Herpin, Ingo Braasch, Michael Kraeussling, Cornelia Schmidt, Eva C. Thoma, Shuhei Nakamura, Minoru Tanaka, Manfred Schartl
PLoS Genet. 2010 February; 6(2): e1000844. Published online 2010 February 12. doi: 10.1371/journal.pgen.1000844
PMCID:
PMC2820524
Abstract Full Text PDF–2.4M Supplementary Material
Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention
Andrew L. Hufton, Susanne Mathia, Helene Braun, Udo Georgi, Hans Lehrach, Martin Vingron, Albert J. Poustka, Georgia Panopoulou
Genome Res. 2009 November; 19(11): 2036–2051. doi: 10.1101/gr.093237.109
PMCID:
PMC2775584
Abstract Full Text PDF–1.5M
Evolution of gene function and regulatory control after whole-genome duplication: Comparative analyses in vertebrates
Karin S. Kassahn, Vinh T. Dang, Simon J. Wilkins, Andrew C. Perkins, Mark A. Ragan
Genome Res. 2009 August; 19(8): 1404–1418. doi: 10.1101/gr.086827.108
PMCID:
PMC2720184
Abstract Full Text PDF–1010K
The Maternally Expressed WRKY Transcription Factor TTG2 Controls Lethality in Interploidy Crosses of Arabidopsis
Brian P Dilkes, Melissa Spielman, Renate Weizbauer, Brian Watson, Diana Burkart-Waco, Rod J Scott, Luca Comai
PLoS Biol. 2008 December; 6(12): e308. Published online 2008 December 9. doi: 10.1371/journal.pbio.0060308
PMCID:
PMC2596861
Abstract Full Text PDF–768K Supplementary Material
Finding and Comparing Syntenic Regions among Arabidopsis and the Outgroups Papaya, Poplar, and Grape: CoGe with Rosids
Eric Lyons, Brent Pedersen, Josh Kane, Maqsudul Alam, Ray Ming, Haibao Tang, Xiyin Wang, John Bowers, Andrew Paterson, Damon Lisch, Michael Freeling
Plant Physiol. 2008 December; 148(4): 1772–1781. doi: 10.1104/pp.108.124867
PMCID:
PMC2593677
Abstract Full Text PDF–1.3M Supplementary Material
The Role of bZIP Transcription Factors in Green Plant Evolution: Adaptive Features Emerging from Four Founder Genes
Luiz Gustavo Guedes Corrêa, Diego Mauricio Riaño-Pachón, Carlos Guerra Schrago, Renato Vicentini dos Santos, Bernd Mueller-Roeber, Michel Vincentz
PLoS ONE. 2008; 3(8): e2944. Published online 2008 August 13. doi: 10.1371/journal.pone.0002944
PMCID:
PMC2492810
Abstract Full Text PDF–874K Supplementary Material
Preferential subfunctionalization of slow-evolving genes after allopolyploidization in Xenopus laevis
Marie Sémon, Kenneth H. Wolfe
Proc Natl Acad Sci U S A. 2008 June 17; 105(24): 8333–8338. Published online 2008 June 9. doi: 10.1073/pnas.0708705105
PMCID:
PMC2448837
Abstract Full Text PDF–362K Supplementary Material
Subfunctionalization of Duplicated Zebrafish pax6 Genes by cis-Regulatory Divergence
Dirk A Kleinjan, Ruth M Bancewicz, Philippe Gautier, Ralf Dahm, Helia B Schonthaler, Giuseppe Damante, Anne Seawright, Ann M Hever, Patricia L Yeyati, Veronica van Heyningen, Pedro Coutinho
PLoS Genet. 2008 February; 4(2): e29. Published online 2008 February 15. doi: 10.1371/journal.pgen.0040029
PMCID:
PMC2242813
Abstract Full Text PDF–822K Supplementary Material
CONDOR: a database resource of developmentally associated conserved non-coding elements
Adam Woolfe, Debbie K Goode, Julie Cooke, Heather Callaway, Sarah Smith, Phil Snell, Gayle K McEwen, Greg Elgar
BMC Dev Biol. 2007; 7: 100. Published online 2007 August 30. doi: 10.1186/1471-213X-7-100
PMCID:
PMC2020477
Abstract Full Text PDF–1.0M
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