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Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes
Marco van het Hoog, Timothy J Rast, Mikhail Martchenko, Suzanne Grindle, Daniel Dignard, Hervé Hogues, Christine Cuomo, Matthew Berriman, Stewart Scherer, BB Magee, Malcolm Whiteway, Hiroji Chibana, André Nantel, PT Magee
Genome Biol. 2007; 8(4): R52. Published online 2007 April 9. doi: 10.1186/gb-2007-8-4-r52
PMCID:
PMC1896002
Abstract Full Text PDF–1.3M Supplementary Material

Is Cited by the Following 27 Articles in this Archive:

Systems Biology of Fungal Infection
Fabian Horn, Thorsten Heinekamp, Olaf Kniemeyer, Johannes Pollmächer, Vito Valiante, Axel A. Brakhage
Front Microbiol. 2012; 3: 108. Published online 2012 April 2. doi: 10.3389/fmicb.2012.00108
PMCID:
PMC3317178
Abstract Full Text PDF–1.4M
DNA methylation regulates phenotype-dependent transcriptional activity in Candida albicans
Prashant K. Mishra, Mary Baum, John Carbon
Proc Natl Acad Sci U S A. 2011 July 19; 108(29): 11965–11970. Published online 2011 July 5. doi: 10.1073/pnas.1109631108
PMCID:
PMC3141964
Abstract Full Text PDF–651K Supplementary Material
Comparative Genomics and the Evolution of Pathogenicity in Human Pathogenic Fungi
Gary P. Moran, David C. Coleman, Derek J. Sullivan
Eukaryot Cell. 2011 January; 10(1): 34–42. doi: 10.1128/EC.00242-10
PMCID:
PMC3019795
Abstract Full Text PDF–364K
The Transcriptomes of Two Heritable Cell Types Illuminate the Circuit Governing Their Differentiation
Brian B. Tuch, Quinn M. Mitrovich, Oliver R. Homann, Aaron D. Hernday, Cinna K. Monighetti, Francisco M. De La Vega, Alexander D. Johnson
PLoS Genet. 2010 August; 6(8): e1001070. Published online 2010 August 19. doi: 10.1371/journal.pgen.1001070
PMCID:
PMC2924316
Abstract Full Text PDF–2.2M Supplementary Material
Experimental annotation of the human pathogen Candida albicans coding and noncoding transcribed regions using high-resolution tiling arrays
Adnane Sellam, Hervé Hogues, Christopher Askew, Faiza Tebbji, Marco van het Hoog, Hugo Lavoie, Carol A Kumamoto, Malcolm Whiteway, André Nantel
Genome Biol. 2010; 11(7): R71. Published online 2010 July 9. doi: 10.1186/gb-2010-11-7-r71
PMCID:
PMC2926782
Abstract Full Text PDF–3.9M Supplementary Material
Chromosomal G + C Content Evolution in Yeasts: Systematic Interspecies Differences, and GC-Poor Troughs at Centromeres
Denise B. Lynch, Mary E. Logue, Geraldine Butler, Kenneth H. Wolfe
Genome Biol Evol. 2010; 2: 572–583. Published online 2010 July 8. doi: 10.1093/gbe/evq042
PMCID:
PMC2997560
Abstract Full Text PDF–914K
Genomic Plasticity of the Human Fungal Pathogen Candida albicans
Anna Selmecki, Anja Forche, Judith Berman
Eukaryot Cell. 2010 July; 9(7): 991–1008. doi: 10.1128/EC.00060-10
PMCID:
PMC2901674
Abstract Full Text PDF–1.7M
Adaptations of Candida albicans for Growth in the Mammalian Intestinal Tract
Ari Rosenbach, Daniel Dignard, Jessica V. Pierce, Malcolm Whiteway, Carol A. Kumamoto
Eukaryot Cell. 2010 July; 9(7): 1075–1086. doi: 10.1128/EC.00034-10
PMCID:
PMC2901676
Abstract Full Text PDF–1.2M Supplementary Material
Fungal Secretome Database: Integrated platform for annotation of fungal secretomes
Jaeyoung Choi, Jongsun Park, Donghan Kim, Kyongyong Jung, Seogchan Kang, Yong-Hwan Lee
BMC Genomics. 2010; 11: 105. Published online 2010 February 11. doi: 10.1186/1471-2164-11-105
PMCID:
PMC2836287
Abstract Full Text PDF–1.0M
Rap1 in Candida albicans: an Unusual Structural Organization and a Critical Function in Suppressing Telomere Recombination
Eun Young Yu, Wei-Feng Yen, Olga Steinberg-Neifach, Neal F. Lue
Mol Cell Biol. 2010 March; 30(5): 1254–1268. Published online 2009 December 14. doi: 10.1128/MCB.00986-09
PMCID:
PMC2820896
Abstract Full Text PDF–6.5M
Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans
Andrew P. Jackson, John A. Gamble, Tim Yeomans, Gary P. Moran, David Saunders, David Harris, Martin Aslett, Jamie F. Barrell, Geraldine Butler, Francesco Citiulo, David C. Coleman, Piet W.J. de Groot, Tim J. Goodwin, Michael A. Quail, Jacqueline McQuillan, Carol A. Munro, Arnab Pain, Russell T. Poulter, Marie-Adèle Rajandream, Hubert Renauld, Martin J. Spiering, Adrian Tivey, Neil A.R. Gow, Barclay Barrell, Derek J. Sullivan, Matthew Berriman
Genome Res. 2009 December; 19(12): 2231–2244. doi: 10.1101/gr.097501.109
PMCID:
PMC2792176
Abstract Full Text PDF–1.9M
Transcriptional Regulation of Carbohydrate Metabolism in the Human Pathogen Candida albicans
Christopher Askew, Adnane Sellam, Elias Epp, Hervé Hogues, Alaka Mullick, André Nantel, Malcolm Whiteway
PLoS Pathog. 2009 October; 5(10): e1000612. Published online 2009 October 9. doi: 10.1371/journal.ppat.1000612
PMCID:
PMC2749448
Abstract Full Text PDF–2.1M Supplementary Material
Widespread occurrence of chromosomal aneuploidy following the routine production of Candida albicans mutants
Mélanie Arbour, Elias Epp, Hervé Hogues, Adnane Sellam, Celine Lacroix, Jason Rauceo, Aaron Mitchell, Malcolm Whiteway, André Nantel
FEMS Yeast Res. 2009 November; 9(7): 1070–1077. Published online 2009 September 1. doi: 10.1111/j.1567-1364.2009.00563.x
PMCID:
PMC2784216
Abstract Full Text PDF–336K
Aneuploid Chromosomes Are Highly Unstable during DNA Transformation of Candida albicans
Kelly Bouchonville, Anja Forche, Karen E. S. Tang, Anna Selmecki, Judith Berman
Eukaryot Cell. 2009 October; 8(10): 1554–1566. Published online 2009 August 21. doi: 10.1128/EC.00209-09
PMCID:
PMC2756872
Abstract Full Text PDF–2.4M
Evolution in Candida albicans Populations During a Single Passage Through a Mouse Host
Anja Forche, P. T. Magee, Anna Selmecki, Judith Berman, Georgiana May
Genetics. 2009 July; 182(3): 799–811. doi: 10.1534/genetics.109.103325
PMCID:
PMC2710160
Abstract Full Text PDF–1.4M
Efficient and Rapid identification of Candida albicans allelic status using SNP-RFLP
Anja Forche, Musetta Steinbach, Judith Berman
FEMS Yeast Res. Author manuscript; available in PMC 2010 October 1.
Published in final edited form as: FEMS Yeast Res. 2009 October; 9(7): 1061–1069. Published online 2009 June 22. doi: 10.1111/j.1567-1364.2009.00542.x
PMCID:
PMC2763041
Abstract Full Text PDF–776K Supplementary Material
Role of Ndt80p in Sterol Metabolism Regulation and Azole Resistance in Candida albicans
Adnane Sellam, Faïza Tebbji, André Nantel
Eukaryot Cell. 2009 August; 8(8): 1174–1183. Published online 2009 June 19. doi: 10.1128/EC.00074-09
PMCID:
PMC2725557
Abstract Full Text PDF–2.6M Supplementary Material
Evolution of pathogenicity and sexual reproduction in eight Candida genomes
Geraldine Butler, Matthew D. Rasmussen, Michael F. Lin, Manuel A.S. Santos, Sharadha Sakthikumar, Carol A. Munro, Esther Rheinbay, Manfred Grabherr, Anja Forche, Jennifer L. Reedy, Ino Agrafioti, Martha B. Arnaud, Steven Bates, Alistair J.P. Brown, Sascha Brunke, Maria C. Costanzo, David A. Fitzpatrick, Piet W. J. de Groot, David Harris, Lois L. Hoyer, Bernhard Hube, Frans M. Klis, Chinnappa Kodira, Nicola Lennard, Mary E. Logue, Ronny Martin, Aaron M. Neiman, Elissavet Nikolaou, Michael A. Quail, Janet Quinn, Maria C. Santos, Florian F. Schmitzberger, Gavin Sherlock, Prachi Shah, Kevin Silverstein, Marek S. Skrzypek, David Soll, Rodney Staggs, Ian Stansfield, Michael P H Stumpf, Peter E. Sudbery, Srikantha Thyagarajan, Qiandong Zeng, Judith Berman, Matthew Berriman, Joseph Heitman, Neil A. R. Gow, Michael C. Lorenz, Bruce W. Birren, Manolis Kellis, Christina A. Cuomo
Nature. Author manuscript; available in PMC 2010 March 8.
Published in final edited form as: Nature. 2009 June 4; 459(7247): 657–662. doi: 10.1038/nature08064
PMCID:
PMC2834264
Abstract Full Text PDF–868K Supplementary Material
Neocentromeres Form Efficiently at Multiple Possible Loci in Candida albicans
Carrie Ketel, Helen S. W. Wang, Mark McClellan, Kelly Bouchonville, Anna Selmecki, Tamar Lahav, Maryam Gerami-Nejad, Judith Berman
PLoS Genet. 2009 March; 5(3): e1000400. Published online 2009 March 6. doi: 10.1371/journal.pgen.1000400
PMCID:
PMC2642679
Abstract Full Text PDF–2.3M Supplementary Material
Telomere Organization in the Ligninolytic Basidiomycete Pleurotus ostreatus
Gúmer Pérez, Jasmyn Pangilinan, Antonio G. Pisabarro, Lucía Ramírez
Appl Environ Microbiol. 2009 March; 75(5): 1427–1436. Published online 2008 December 29. doi: 10.1128/AEM.01889-08
PMCID:
PMC2648151
Abstract Full Text PDF–1.3M Supplementary Material
SNUGB: a versatile genome browser supporting comparative and functional fungal genomics
Kyongyong Jung, Jongsun Park, Jaeyoung Choi, Bongsoo Park, Seungill Kim, Kyohun Ahn, Jaehyuk Choi, Doil Choi, Seogchan Kang, Yong-Hwan Lee
BMC Genomics. 2008; 9: 586. Published online 2008 December 4. doi: 10.1186/1471-2164-9-586
PMCID:
PMC2649115
Abstract Full Text PDF–1.9M
Fungal cytochrome P450 database
Jongsun Park, Seungmin Lee, Jaeyoung Choi, Kyohun Ahn, Bongsoo Park, Jaejin Park, Seogchan Kang, Yong-Hwan Lee
BMC Genomics. 2008; 9: 402. Published online 2008 August 28. doi: 10.1186/1471-2164-9-402
PMCID:
PMC2542383
Abstract Full Text PDF–826K
Immunological Dominance of Trypanosoma cruzi Tandem Repeat Proteins
Yasuyuki Goto, Darrick Carter, Steven G. Reed
Infect Immun. 2008 September; 76(9): 3967–3974. Published online 2008 July 14. doi: 10.1128/IAI.00604-08
PMCID:
PMC2519453
Abstract Full Text PDF–254K
The Yak1 Kinase Is Involved in the Initiation and Maintenance of Hyphal Growth in Candida albicans
Sophie Goyard, Philipp Knechtle, Murielle Chauvel, Adeline Mallet, Marie-Christine Prévost, Caroline Proux, Jean-Yves Coppée, Patrick Schwartz, Françoise Dromer, Hyunsook Park, Scott G. Filler, Guilhem Janbon, Christophe d'Enfert
Mol Biol Cell. 2008 May; 19(5): 2251–2266. doi: 10.1091/mbc.E07-09-0960
PMCID:
PMC2366847
Abstract Full Text PDF–1.3M Supplementary Material
Discovering the Secrets of the Candida albicans Agglutinin-Like Sequence (ALS) Gene Family—a Sticky Pursuit
LOIS L. HOYER, CLAYTON B. GREEN, SOON-HWAN OH, XIAOMIN ZHAO
Med Mycol. Author manuscript; available in PMC 2009 September 14.
Published in final edited form as: Med Mycol. 2008 February; 46(1): 1–15. doi: 10.1080/13693780701435317
PMCID:
PMC2742883
Abstract Full Text PDF–735K
CandidaDB: a multi-genome database for Candida species and related Saccharomycotina
Tristan Rossignol, Pierre Lechat, Christina Cuomo, Qiandong Zeng, Ivan Moszer, Christophe d’Enfert
Nucleic Acids Res. 2008 January; 36(Database issue): D557–D561. Published online 2008 January. doi: 10.1093/nar/gkm1010
PMCID:
PMC2238939
Abstract Full Text PDF–2.3M
Extensive chromosome rearrangements distinguish the karyotype of the hypovirulent species Candida dubliniensis from the virulent Candida albicans
B B Magee, Melissa D Sanchez, David Saunders, David Harris, M. Berriman, PT Magee
Fungal Genet Biol. Author manuscript; available in PMC 2009 March 1.
Published in final edited form as: Fungal Genet Biol. 2008 March; 45(3): 338–350. Published online 2007 July 20. doi: 10.1016/j.fgb.2007.07.004
PMCID:
PMC2277252
Abstract Full Text PDF–383K Supplementary Material
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