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A haplome alignment and reference sequence of the highly polymorphic Ciona savignyi genome
Kerrin S Small, Michael Brudno, Matthew M Hill, Arend Sidow
Genome Biol. 2007; 8(3): R41. Published online 2007 March 20. doi: 10.1186/gb-2007-8-3-r41
PMCID:
PMC1868934
Abstract Full Text PDF–598K Supplementary Material

Is Cited by the Following 7 Articles in this Archive:

How much does the amphioxus genome represent the ancestor of chordates?
Alexandra Louis, Hugues Roest Crollius, Marc Robinson-Rechavi
Brief Funct Genomics. 2012 March; 11(2): 89–95. Published online 2012 February 28. doi: 10.1093/bfgp/els003
PMCID:
PMC3310212
Abstract Full Text PDF–406K
Ciona Genetics
Michael T. Veeman, Shota Chiba, William C. Smith
Methods Mol Biol. Author manuscript; available in PMC 2011 August 4.
Published in final edited form as: Methods Mol Biol. 2011; 770: 401–422. doi: 10.1007/978-1-61779-210-6_15
PMCID:
PMC3149854
Abstract Full Text PDF–1.4M
High Level of Structural Polymorphism Driven by Mobile Elements in the Hox Genomic Region of the Chaetognath Spadella cephaloptera
Ferdinand Marlétaz, Gabor Gyapay, Yannick Le Parco
Genome Biol Evol. 2010; 2: 665–667. Published online 2010 August 1. doi: 10.1093/gbe/evq047
PMCID:
PMC2997562
Abstract Full Text PDF–753K
The Evolution of Thrombospondins and Their Ligand-Binding Activities
Amber A. Bentley, Josephine C. Adams
Mol Biol Evol. 2010 September; 27(9): 2187–2197. Published online 2010 April 28. doi: 10.1093/molbev/msq107
PMCID:
PMC3107593
Abstract Full Text PDF–453K Supplementary Material
SHRiMP: Accurate Mapping of Short Color-space Reads
Stephen M. Rumble, Phil Lacroute, Adrian V. Dalca, Marc Fiume, Arend Sidow, Michael Brudno
PLoS Comput Biol. 2009 May; 5(5): e1000386. Published online 2009 May 22. doi: 10.1371/journal.pcbi.1000386
PMCID:
PMC2678294
Abstract Full Text PDF–544K
Detecting heterozygosity in shotgun genome assemblies: Lessons from obligately outcrossing nematodes
Antoine Barrière, Shiaw-Pyng Yang, Elizabeth Pekarek, Cristel G. Thomas, Eric S. Haag, Ilya Ruvinsky
Genome Res. 2009 March; 19(3): 470–480. doi: 10.1101/gr.081851.108
PMCID:
PMC2661809
Abstract Full Text PDF–631K
LRRCE: a leucine-rich repeat cysteine capping motif unique to the chordate lineage
Hosil Park, Julie Huxley-Jones, Ray P Boot-Handford, Paul N Bishop, Teresa K Attwood, Jordi Bella
BMC Genomics. 2008; 9: 599. Published online 2008 December 12. doi: 10.1186/1471-2164-9-599
PMCID:
PMC2637281
Abstract Full Text PDF–4.8M Supplementary Material
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