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How high is the level of technical noise in microarray data?
Lev Klebanov, Andrei Yakovlev
Biol Direct. 2007; 2: 9. Published online 2007 April 11. doi: 10.1186/1745-6150-2-9
PMCID:
PMC1855048
Abstract Full Text PDF–322K

Is Cited by the Following 13 Articles in this Archive:

Cellular transcripts of chicken brain tissues in response to H5N1 and Newcastle disease virus infection
Vinod RMT Balasubramaniam, Tham H Wai, Abdul R Omar, Iekhsan Othman, Sharifah S Hassan
Virol J. 2012; 9: 53. Published online 2012 February 23. doi: 10.1186/1743-422X-9-53
PMCID:
PMC3297529
Abstract Full Text PDF–582K
Skeletal muscle gene expression in response to resistance exercise: sex specific regulation
Dongmei Liu, Maureen A Sartor, Gustavo A Nader, Laurie Gutmann, Mary K Treutelaar, Emidio E Pistilli, Heidi B IglayReger, Charles F Burant, Eric P Hoffman, Paul M Gordon
BMC Genomics. 2010; 11: 659. Published online 2010 November 24. doi: 10.1186/1471-2164-11-659
PMCID:
PMC3091777
Abstract Full Text PDF–368K Supplementary Material
Identification of differentially expressed genes using an annealing control primer system in stage III serous ovarian carcinoma
Yun-Sook Kim, Jin Hwan Do, Sumi Bae, Dong-Han Bae, Woong Shick Ahn
BMC Cancer. 2010; 10: 576. Published online 2010 October 22. doi: 10.1186/1471-2407-10-576
PMCID:
PMC2974737
Abstract Full Text PDF–802K Supplementary Material
Intensity dependent estimation of noise in microarrays improves detection of differentially expressed genes
Amit Zeisel, Amnon Amir, Wolfgang J Köstler, Eytan Domany
BMC Bioinformatics. 2010; 11: 400. Published online 2010 July 27. doi: 10.1186/1471-2105-11-400
PMCID:
PMC2920277
Abstract Full Text PDF–2.6M Supplementary Material
A comprehensive sensitivity analysis of microarray breast cancer classification under feature variability
Herman MJ Sontrop, Perry D Moerland, René van den Ham, Marcel JT Reinders, Wim FJ Verhaegh
BMC Bioinformatics. 2009; 10: 389. Published online 2009 November 26. doi: 10.1186/1471-2105-10-389
PMCID:
PMC2789744
Abstract Full Text PDF–923K Supplementary Material
Microarray labeling extension values: laboratory signatures for Affymetrix GeneChips
Yun-Shien Lee, Chun-Houh Chen, Chi-Neu Tsai, Chia-Lung Tsai, Angel Chao, Tzu-Hao Wang
Nucleic Acids Res. 2009 May; 37(8): e61. Published online 2009 May. doi: 10.1093/nar/gkp168
PMCID:
PMC2677891
Abstract Full Text PDF–10M Supplementary Material
Emergent Genome-Wide Control in Wildtype and Genetically Mutated Lipopolysaccarides-Stimulated Macrophages
Masa Tsuchiya, Vincent Piras, Sangdun Choi, Shizuo Akira, Masaru Tomita, Alessandro Giuliani, Kumar Selvarajoo
PLoS ONE. 2009; 4(3): e4905. Published online 2009 March 20. doi: 10.1371/journal.pone.0004905
PMCID:
PMC2654147
Abstract Full Text PDF–1.0M Supplementary Material
Sample entropy analysis of cervical neoplasia gene-expression signatures
Shaleen K Botting, Jerome P Trzeciakowski, Michelle F Benoit, Salama A Salama, Concepcion R Diaz-Arrastia
BMC Bioinformatics. 2009; 10: 66. Published online 2009 February 20. doi: 10.1186/1471-2105-10-66
PMCID:
PMC2656476
Abstract Full Text PDF–625K
PreP+07: improvements of a user friendly tool to preprocess and analyse microarray data
Victoria Martin-Requena, Antonio Muñoz-Merida, M Gonzalo Claros, Oswaldo Trelles
BMC Bioinformatics. 2009; 10: 16. Published online 2009 January 12. doi: 10.1186/1471-2105-10-16
PMCID:
PMC2657788
Abstract Full Text PDF–994K Supplementary Material
Determining gene expression on a single pair of microarrays
Robert W Reid, Anthony A Fodor
BMC Bioinformatics. 2008; 9: 489. Published online 2008 November 21. doi: 10.1186/1471-2105-9-489
PMCID:
PMC2605475
Abstract Full Text PDF–453K Supplementary Material
Using gene expression databases for classical trait QTL candidate gene discovery in the BXD recombinant inbred genetic reference population: Mouse forebrain weight
Lu Lu, Lai Wei, Jeremy L Peirce, Xusheng Wang, Jianhua Zhou, Ramin Homayouni, Robert W Williams, David C Airey
BMC Genomics. 2008; 9: 444. Published online 2008 September 25. doi: 10.1186/1471-2164-9-444
PMCID:
PMC2570693
Abstract Full Text PDF–1.0M Supplementary Material
From microarray to biology: an integrated experimental, statistical and in silico analysis of how the extracellular matrix modulates the phenotype of cancer cells
Mikhail G Dozmorov, Kimberly D Kyker, Paul J Hauser, Ricardo Saban, David D Buethe, Igor Dozmorov, Michael B Centola, Daniel J Culkin, Robert E Hurst
BMC Bioinformatics. 2008; 9(Suppl 9): S4. Published online 2008 August 12. doi: 10.1186/1471-2105-9-S9-S4
PMCID:
PMC2537575
Abstract Full Text PDF–3.2M Supplementary Material
Revisiting adverse effects of cross-hybridization in Affymetrix gene expression data: do they matter for correlation analysis?
Lev Klebanov, Linlin Chen, Andrei Yakovlev
Biol Direct. 2007; 2: 28. Published online 2007 November 7. doi: 10.1186/1745-6150-2-28
PMCID:
PMC2211459
Abstract Full Text PDF–2.6M
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