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Patterns and rates of intron divergence between humans and chimpanzees
Elodie Gazave, Tomàs Marqués-Bonet, Olga Fernando, Brian Charlesworth, Arcadi Navarro
Genome Biol. 2007; 8(2): R21. Published online 2007 February 19. doi: 10.1186/gb-2007-8-2-r21
PMCID:
PMC1852421
Abstract Full Text PDF–303K Supplementary Material

Is Cited by the Following 21 Articles in this Archive:

IntDb: A comprehensive database for classified introns of saccharomyces & human
Subhalaxmi Mohanty, Amouda Nizam, Monalisha Biswal
Bioinformation. 2012; 8(5): 233–236. Published online 2012 March 17. doi: 10.6026/97320630008233
PMCID:
PMC3314878
Abstract Full Text PDF–261K Supplementary Material
Negative Correlation between Expression Level and Evolutionary Rate of Long Intergenic Noncoding RNAs
David Managadze, Igor B. Rogozin, Diana Chernikova, Svetlana A. Shabalina, Eugene V. Koonin
Genome Biol Evol. 2011; 3: 1390–1404. Published online 2011 November 9. doi: 10.1093/gbe/evr116
PMCID:
PMC3242500
Abstract Full Text PDF–722K
Comparative Analysis of Teleost Genome Sequences Reveals an Ancient Intron Size Expansion in the Zebrafish Lineage
Stephen P. Moss, Domino A. Joyce, Stuart Humphries, Katherine J. Tindall, David H. Lunt
Genome Biol Evol. 2011; 3: 1187–1196. Published online 2011 September 13. doi: 10.1093/gbe/evr090
PMCID:
PMC3205604
Abstract Full Text PDF–370K
Novel intron markers to study the phylogeny of closely related mammalian species
Javier Igea, Javier Juste, Jose Castresana
BMC Evol Biol. 2010; 10: 369. Published online 2010 November 30. doi: 10.1186/1471-2148-10-369
PMCID:
PMC3087552
Abstract Full Text PDF–473K Supplementary Material
Expression breadth and expression abundance behave differently in correlations with evolutionary rates
Seung Gu Park, Sun Shim Choi
BMC Evol Biol. 2010; 10: 241. Published online 2010 August 7. doi: 10.1186/1471-2148-10-241
PMCID:
PMC2924872
Abstract Full Text PDF–1.9M Supplementary Material
Unconstrained mining of transcript data reveals increased alternative splicing complexity in the human transcriptome
I. G. Mollet, Claudia Ben-Dov, Daniel Felício-Silva, A. R. Grosso, Pedro Eleutério, Ruben Alves, Ray Staller, Tito Santos Silva, Maria Carmo-Fonseca
Nucleic Acids Res. 2010 August; 38(14): 4740–4754. Published online 2010 April 10. doi: 10.1093/nar/gkq197
PMCID:
PMC2919708
Abstract Full Text PDF–5.5M Supplementary Material
B7-H4 gene polymorphisms are associated with sporadic breast cancer in a Chinese Han population
Jie Zhang, Mingyan Zhang, Wei Jiang, Lihong Wang, Zhenkun Fu, Dalin Li, Da Pang, Dianjun Li
BMC Cancer. 2009; 9: 394. Published online 2009 November 11. doi: 10.1186/1471-2407-9-394
PMCID:
PMC2780456
Abstract Full Text PDF–229K Supplementary Material
Widespread Genomic Signatures of Natural Selection in Hominid Evolution
Graham McVicker, David Gordon, Colleen Davis, Phil Green
PLoS Genet. 2009 May; 5(5): e1000471. Published online 2009 May 8. doi: 10.1371/journal.pgen.1000471
PMCID:
PMC2669884
Abstract Full Text PDF–1.0M Supplementary Material
Genome-wide evolutionary analysis of the noncoding RNA genes and noncoding DNA of Paramecium tetraurelia
Chun-Long Chen, Hui Zhou, Jian-You Liao, Liang-Hu Qu, Laurence Amar
RNA. 2009 April; 15(4): 503–514. doi: 10.1261/rna.1306009
PMCID:
PMC2661823
Abstract Full Text PDF–830K
Atypical relaxation of structural constraints in Hox gene clusters of the green anole lizard
Nicolas Di-Poï, Juan I. Montoya-Burgos, Denis Duboule
Genome Res. 2009 April; 19(4): 602–610. doi: 10.1101/gr.087932.108
PMCID:
PMC2665779
Abstract Full Text PDF–1.8M
Patterns of exon-intron architecture variation of genes in eukaryotic genomes
Liucun Zhu, Ying Zhang, Wen Zhang, Sihai Yang, Jian-Qun Chen, Dacheng Tian
BMC Genomics. 2009; 10: 47. Published online 2009 January 24. doi: 10.1186/1471-2164-10-47
PMCID:
PMC2636830
Abstract Full Text PDF–1.7M Supplementary Material
Conservation and implications of eukaryote transcriptional regulatory regions across multiple species
Lin Wan, Dayong Li, Donglei Zhang, Xue Liu, Wenjiang J Fu, Lihuang Zhu, Minghua Deng, Fengzhu Sun, Minping Qian
BMC Genomics. 2008; 9: 623. Published online 2008 December 20. doi: 10.1186/1471-2164-9-623
PMCID:
PMC2640395
Abstract Full Text PDF–916K Supplementary Material
The effect of intron length on exon creation ratios during the evolution of mammalian genomes
Meenakshi Roy, Namshin Kim, Yi Xing, Christopher Lee
RNA. 2008 November; 14(11): 2261–2273. doi: 10.1261/rna.1024908
PMCID:
PMC2578852
Abstract Full Text PDF–944K
Multilocus Patterns of Nucleotide Polymorphism and the Demographic History of Populus tremula
Pär K. Ingvarsson
Genetics. 2008 September; 180(1): 329–340. doi: 10.1534/genetics.108.090431
PMCID:
PMC2535685
Abstract Full Text PDF–616K
Longer First Introns Are a General Property of Eukaryotic Gene Structure
Keith R. Bradnam, Ian Korf
PLoS ONE. 2008; 3(8): e3093. Published online 2008 August 29. doi: 10.1371/journal.pone.0003093
PMCID:
PMC2518113
Abstract Full Text PDF–298K
Scanning the genome for gene single nucleotide polymorphisms involved in adaptive population differentiation in white spruce
Marie-Claire Namroud, Jean Beaulieu, Nicolas Juge, Jérôme Laroche, Jean Bousquet
Mol Ecol. 2008 August; 17(16): 3599–3613. doi: 10.1111/j.1365-294X.2008.03840.x
PMCID:
PMC2613251
Abstract Full Text PDF–381K
Evidence against the energetic cost hypothesis for the short introns in highly expressed genes
Yi-Fei Huang, Deng-Ke Niu
BMC Evol Biol. 2008; 8: 154. Published online 2008 May 20. doi: 10.1186/1471-2148-8-154
PMCID:
PMC2424036
Abstract Full Text PDF–355K Supplementary Material
Conserved elements with potential to form polymorphic G-quadruplex structures in the first intron of human genes
Johanna Eddy, Nancy Maizels
Nucleic Acids Res. 2008 March; 36(4): 1321–1333. Published online 2008 March. doi: 10.1093/nar/gkm1138
PMCID:
PMC2275096
Abstract Full Text PDF–919K Supplementary Material
Global analysis of alternative splicing differences between humans and chimpanzees
John A. Calarco, Yi Xing, Mario Cáceres, Joseph P. Calarco, Xinshu Xiao, Qun Pan, Christopher Lee, Todd M. Preuss, Benjamin J. Blencowe
Genes Dev. 2007 November 15; 21(22): 2963–2975. doi: 10.1101/gad.1606907
PMCID:
PMC2049197
Abstract Full Text PDF–542K
Patterns of selective constraints in noncoding DNA of rice
Xingyi Guo, Yu Wang, Peter D Keightley, Longjiang Fan
BMC Evol Biol. 2007; 7: 208. Published online 2007 November 1. doi: 10.1186/1471-2148-7-208
PMCID:
PMC2174951
Abstract Full Text PDF–714K Supplementary Material
Chromatin structure and evolution in the human genome
James GD Prendergast, Harry Campbell, Nick Gilbert, Malcolm G Dunlop, Wendy A Bickmore, Colin AM Semple
BMC Evol Biol. 2007; 7: 72. Published online 2007 May 9. doi: 10.1186/1471-2148-7-72
PMCID:
PMC1876461
Abstract Full Text PDF–446K
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