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Vertebrate gene finding from multiple-species alignments using a two-level strategy
David Carter, Richard Durbin
Genome Biol. 2006; 7(Suppl 1): S6. Published online 2006 August 7. doi: 10.1186/gb-2006-7-s1-s6
PMCID:
PMC1810555
Abstract Full Text PDF–171K

Is Cited by the Following 5 Articles in this Archive:

A method for identifying alternative or cryptic donor splice sites within gene and mRNA sequences. Comparisons among sequences from vertebrates, echinoderms and other groups
Katherine M Buckley, Liliana D Florea, L Courtney Smith
BMC Genomics. 2009; 10: 318. Published online 2009 July 16. doi: 10.1186/1471-2164-10-318
PMCID:
PMC2721852
Abstract Full Text PDF–460K Supplementary Material
Reranking candidate gene models with cross-species comparison for improved gene prediction
Qian Liu, Koby Crammer, Fernando CN Pereira, David S Roos
BMC Bioinformatics. 2008; 9: 433. Published online 2008 October 14. doi: 10.1186/1471-2105-9-433
PMCID:
PMC2587481
Abstract Full Text PDF–678K
Resolving the structural features of genomic islands: A machine learning approach
Georgios S. Vernikos, Julian Parkhill
Genome Res. 2008 February; 18(2): 331–342. doi: 10.1101/gr.7004508
PMCID:
PMC2203631
Abstract Full Text PDF–809K
CONTRAST: a discriminative, phylogeny-free approach to multiple informant de novo gene prediction
Samuel S Gross, Chuong B Do, Marina Sirota, Serafim Batzoglou
Genome Biol. 2007; 8(12): R269. Published online 2007 December 20. doi: 10.1186/gb-2007-8-12-r269
PMCID:
PMC2246271
Abstract Full Text PDF–1.9M
EGASP: the human ENCODE Genome Annotation Assessment Project
Roderic Guigó, Paul Flicek, Josep F Abril, Alexandre Reymond, Julien Lagarde, France Denoeud, Stylianos Antonarakis, Michael Ashburner, Vladimir B Bajic, Ewan Birney, Robert Castelo, Eduardo Eyras, Catherine Ucla, Thomas R Gingeras, Jennifer Harrow, Tim Hubbard, Suzanna E Lewis, Martin G Reese
Genome Biol. 2006; 7(Suppl 1): S2. Published online 2006 August 7. doi: 10.1186/gb-2006-7-s1-s2
PMCID:
PMC1810551
Abstract Full Text PDF–2.1M
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