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EGASP: Introduction
Martin G Reese, Roderic Guigó
Genome Biol. 2006; 7(Suppl 1): S1. Published online 2006 August 7. doi: 10.1186/gb-2006-7-s1-s1
PMCID:
PMC1810546
Full Text PDF–57K

Is Cited by the Following 8 Articles in this Archive:

A standard variation file format for human genome sequences
Martin G Reese, Barry Moore, Colin Batchelor, Fidel Salas, Fiona Cunningham, Gabor T Marth, Lincoln Stein, Paul Flicek, Mark Yandell, Karen Eilbeck
Genome Biol. 2010; 11(8): R88. Published online 2010 August 26. doi: 10.1186/gb-2010-11-8-r88
PMCID:
PMC2945790
Abstract Full Text PDF–1.0M
mGene: Accurate SVM-based gene finding with an application to nematode genomes
Gabriele Schweikert, Alexander Zien, Georg Zeller, Jonas Behr, Christoph Dieterich, Cheng Soon Ong, Petra Philips, Fabio De Bona, Lisa Hartmann, Anja Bohlen, Nina Krüger, Sören Sonnenburg, Gunnar Rätsch
Genome Res. 2009 November; 19(11): 2133–2143. doi: 10.1101/gr.090597.108
PMCID:
PMC2775605
Abstract Full Text PDF–709K
Quantitative measures for the management and comparison of annotated genomes
Karen Eilbeck, Barry Moore, Carson Holt, Mark Yandell
BMC Bioinformatics. 2009; 10: 67. Published online 2009 February 23. doi: 10.1186/1471-2105-10-67
PMCID:
PMC2653490
Abstract Full Text PDF–1.5M Supplementary Material
Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments
Brian J Haas, Steven L Salzberg, Wei Zhu, Mihaela Pertea, Jonathan E Allen, Joshua Orvis, Owen White, C Robin Buell, Jennifer R Wortman
Genome Biol. 2008; 9(1): R7. Published online 2008 January 11. doi: 10.1186/gb-2008-9-1-r7
PMCID:
PMC2395244
Abstract Full Text PDF–722K Supplementary Material
A code for transcription initiation in mammalian genomes
Martin C. Frith, Eivind Valen, Anders Krogh, Yoshihide Hayashizaki, Piero Carninci, Albin Sandelin
Genome Res. 2008 January; 18(1): 1–12. doi: 10.1101/gr.6831208
PMCID:
PMC2134772
Abstract Full Text PDF–740K
A code for transcription initiation in mammalian genomes
Martin C. Frith, Eivind Valen, Anders Krogh, Yoshihide Hayashizaki, Piero Carninci, Albin Sandelin
Genome Res. 2008 January; 18(1): 1–12. doi: 10.1101/gr.6831208
PMCID:
PMC2134772
Abstract Full Text PDF–740K
Determining promoter location based on DNA structure first-principles calculations
J Ramon Goñi, Alberto Pérez, David Torrents, Modesto Orozco
Genome Biol. 2007; 8(12): R263. Published online 2007 December 11. doi: 10.1186/gb-2007-8-12-r263
PMCID:
PMC2246265
Abstract Full Text PDF–360K Supplementary Material
Functional constraint and small insertions and deletions in the ENCODE regions of the human genome
Taane G Clark, Toby Andrew, Gregory M Cooper, Elliott H Margulies, James C Mullikin, David J Balding
Genome Biol. 2007; 8(9): R180. Published online 2007 September 4. doi: 10.1186/gb-2007-8-9-r180
PMCID:
PMC2375018
Abstract Full Text PDF–386K
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