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Identification of ciliary and ciliopathy genes in Caenorhabditis elegans through comparative genomics
Nansheng Chen, Allan Mah, Oliver E Blacque, Jeffrey Chu, Kiran Phgora, Mathieu W Bakhoum, C Rebecca Hunt Newbury, Jaswinder Khattra, Susanna Chan, Anne Go, Evgeni Efimenko, Robert Johnsen, Prasad Phirke, Peter Swoboda, Marco Marra, Donald G Moerman, Michel R Leroux, David L Baillie, Lincoln D Stein
Genome Biol. 2006; 7(12): R126. Published online 2006 December 22. doi: 10.1186/gb-2006-7-12-r126
PMCID:
PMC1794439
Abstract Full Text PDF–532K Supplementary Material
 Is Cited by the Following 18 Articles in this Archive:
Hyperactive Neuroendocrine Secretion Causes Size, Feeding, and Metabolic Defects of C. elegans Bardet-Biedl Syndrome Mutants
Brian H. Lee, Jason Liu, Daisy Wong, Supriya Srinivasan, Kaveh Ashrafi
PLoS Biol. 2011 December; 9(12): e1001219. Published online 2011 December 13. doi: 10.1371/journal.pbio.1001219
PMCID:
PMC3236739
Abstract Full Text PDF–1.5M Supplementary Material
Fine tuning of RFX/DAF-19-regulated target gene expression through binding to multiple sites in Caenorhabditis elegans
Jeffery S. C. Chu, Maja Tarailo-Graovac, Di Zhang, Jun Wang, Bora Uyar, Domena Tu, Joanne Trinh, David L. Baillie, Nansheng Chen
Nucleic Acids Res. 2012 January; 40(1): 53–64. Published online 2011 September 8. doi: 10.1093/nar/gkr690
PMCID:
PMC3245922
Abstract Full Text PDF–6.2M
Regulating the transition from centriole to basal body
Tetsuo Kobayashi, Brian D. Dynlacht
J Cell Biol. 2011 May 2; 193(3): 435–444. doi: 10.1083/jcb.201101005
PMCID:
PMC3087006
Abstract Full Text PDF–1.2M
Functional Specialization of Sensory Cilia by an RFX Transcription Factor Isoform
Juan Wang, Hillel T. Schwartz, Maureen M. Barr
Genetics. 2010 December; 186(4): 1295–1307. doi: 10.1534/genetics.110.122879
PMCID:
PMC2998312
Abstract Full Text PDF–4.3M
Regulatory Factor X (RFX)-mediated transcriptional rewiring of ciliary genes in animals
Brian P. Piasecki, Jan Burghoorn, Peter Swoboda
Proc Natl Acad Sci U S A. 2010 July 20; 107(29): 12969–12974. Published online 2010 July 6. doi: 10.1073/pnas.0914241107
PMCID:
PMC2919930
Abstract Full Text PDF–845K Supplementary Material
Specific α- and β-Tubulin Isotypes Optimize the Functions of Sensory Cilia in Caenorhabditis elegans
Daryl D. Hurd, Renee M. Miller, Lizbeth Núñez, Douglas S. Portman
Genetics. 2010 July; 185(3): 883–896. doi: 10.1534/genetics.110.116996
PMCID:
PMC2907207
Abstract Full Text PDF–2.0M
Convergent evolution of RFX transcription factors and ciliary genes predated the origin of metazoans
Jeffrey SC Chu, David L Baillie, Nansheng Chen
BMC Evol Biol. 2010; 10: 130. Published online 2010 May 4. doi: 10.1186/1471-2148-10-130
PMCID:
PMC2873420
Abstract Full Text PDF–1.3M Supplementary Material
Cildb: a knowledgebase for centrosomes and cilia
Olivier Arnaiz, Agata Malinowska, Catherine Klotz, Linda Sperling, Michal Dadlez, France Koll, Jean Cohen
Database (Oxford) 2009; 2009: bap022. Published online 2009 December 7. doi: 10.1093/database/bap022
PMCID:
PMC2860946
Abstract Full Text PDF–810K
The Primary Cilium as a Complex Signaling Center
Nicolas F. Berbari, Amber K. O’Connor, Courtney J. Haycraft, Bradley K. Yoder
Curr Biol. Author manuscript; available in PMC 2010 July 14.
Published in final edited form as: Curr Biol. 2009 July 14; 19(13): R526. doi: 10.1016/j.cub.2009.05.025
PMCID:
PMC2814769
Abstract Full Text PDF–1.4M
Caenorhabditis elegans cisRED: a catalogue of conserved genomic elements
Monica C. Sleumer, Mikhail Bilenky, An He, Gordon Robertson, Nina Thiessen, Steven J. M. Jones
Nucleic Acids Res. 2009 March; 37(4): 1323–1334. Published online 2009 March. doi: 10.1093/nar/gkn1041
PMCID:
PMC2651782
Abstract Full Text PDF–5.9M Supplementary Material
Distinct Isoforms of the RFX Transcription Factor DAF-19 Regulate Ciliogenesis and Maintenance of Synaptic Activity
Gabriele Senti, Peter Swoboda
Mol Biol Cell. 2008 December; 19(12): 5517–5528. doi: 10.1091/mbc.E08-04-0416
PMCID:
PMC2592639
Abstract Full Text PDF–672K Supplementary Material
Multigenome DNA sequence conservation identifies Hox cis-regulatory elements
Steven G. Kuntz, Erich M. Schwarz, John A. DeModena, Tristan De Buysscher, Diane Trout, Hiroaki Shizuya, Paul W. Sternberg, Barbara J. Wold
Genome Res. 2008 December; 18(12): 1955–1968. doi: 10.1101/gr.085472.108
PMCID:
PMC2593573
Abstract Full Text PDF–1.3M
Identification and characterization of novel human tissue-specific RFX transcription factors
Syed Aftab, Lucie Semenec, Jeffrey Shih-Chieh Chu, Nansheng Chen
BMC Evol Biol. 2008; 8: 226. Published online 2008 August 1. doi: 10.1186/1471-2148-8-226
PMCID:
PMC2533330
Abstract Full Text PDF–436K Supplementary Material
Sensory roles of neuronal cilia: Cilia development, morphogenesis, and function in C. elegans
Young-Kyung Bae, Maureen M. Barr
Front Biosci. Author manuscript; available in PMC 2011 June 28.
Published in final edited form as: Front Biosci. 2008 May 1; 13: 5959–5974.
PMCID:
PMC3124812
Abstract Full Text PDF–820K
An Essential Role for DYF-11/MIP-T3 in Assembling Functional Intraflagellar Transport Complexes
Chunmei Li, Peter N. Inglis, Carmen C. Leitch, Evgeni Efimenko, Norann A. Zaghloul, Calvin A. Mok, Erica E. Davis, Nathan J. Bialas, Michael P. Healey, Elise Héon, Mei Zhen, Peter Swoboda, Nicholas Katsanis, Michel R. Leroux
PLoS Genet. 2008 March; 4(3): e1000044. Published online 2008 March 28. doi: 10.1371/journal.pgen.1000044
PMCID:
PMC2268012
Abstract Full Text PDF–681K Supplementary Material
Identification of novel regulatory factor X (RFX) target genes by comparative genomics in Drosophila species
Anne Laurençon, Raphaëlle Dubruille, Evgeni Efimenko, Guillaume Grenier, Ryan Bissett, Elisabeth Cortier, Vivien Rolland, Peter Swoboda, Bénédicte Durand
Genome Biol. 2007; 8(9): R195. Published online 2007 September 17. doi: 10.1186/gb-2007-8-9-r195
PMCID:
PMC2375033
Abstract Full Text PDF–2.0M Supplementary Material
Sensory Ciliogenesis in Caenorhabditis elegans: Assignment of IFT Components into Distinct Modules Based on Transport and Phenotypic Profiles
Guangshuo Ou, Makato Koga, Oliver E. Blacque, Takashi Murayama, Yasumi Ohshima, Jenny C. Schafer, Chunmei Li, Bradley K. Yoder, Michel R. Leroux, Jonathan M. Scholey
Mol Biol Cell. 2007 May; 18(5): 1554–1569. doi: 10.1091/mbc.E06-09-0805
PMCID:
PMC1855012
Abstract Full Text PDF–2.1M Supplementary Material
Mutation of the MAP kinase DYF-5 affects docking and undocking of kinesin-2 motors and reduces their speed in the cilia of Caenorhabditis elegans
Jan Burghoorn, Martijn P. J. Dekkers, Suzanne Rademakers, Ton de Jong, Rob Willemsen, Gert Jansen
Proc Natl Acad Sci U S A. 2007 April 24; 104(17): 7157–7162. Published online 2007 April 9. doi: 10.1073/pnas.0606974104
PMCID:
PMC1855366
Abstract Full Text PDF–1.0M Supplementary Material
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