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UniPep - a database for human N-linked glycosites: a resource for biomarker discovery
Hui Zhang, Paul Loriaux, Jimmy Eng, David Campbell, Andrew Keller, Pat Moss, Richard Bonneau, Ning Zhang, Yong Zhou, Bernd Wollscheid, Kelly Cooke, Eugene C Yi, Hookeun Lee, Elaine R Peskind, Jing Zhang, Richard D Smith, Ruedi Aebersold
Genome Biol. 2006; 7(8): R73. Published online 2006 August 10. doi: 10.1186/gb-2006-7-8-r73
PMCID:
PMC1779586
Abstract Full Text PDF–348K

Is Cited by the Following 17 Articles in this Archive:

Detection and Verification of Glycosylation Patterns of Glycoproteins from Clinical Specimens Using Lectin Microarrays and Lectin-based Immunosorbent Assays
Yan Li, Sheng-Ce Tao, G. Steven Bova, Alvin Y. Liu, Daniel W. Chan, Heng Zhu, Hui Zhang
Anal Chem. Author manuscript; available in PMC 2012 November 15.
Published in final edited form as: Anal Chem. 2011 November 15; 83(22): 8509–8516. Published online 2011 October 26. doi: 10.1021/ac201452f
PMCID:
PMC3258529
Free in PMC on 2012/11/15
Glycosylation Site Alteration in the Evolution of Influenza A (H1N1) Viruses
Shisheng Sun, Qinzhe Wang, Fei Zhao, Wentian Chen, Zheng Li
PLoS One. 2011; 6(7): e22844. Published online 2011 July 28. doi: 10.1371/journal.pone.0022844
PMCID:
PMC3145772
Abstract Full Text PDF–386K Supplementary Material
GlycoFish: A Database of Zebrafish N-linked Glycoproteins Identified Using SPEG Method Coupled with LC/MS
Deniz Baycin-Hizal, Yuan Tian, Ilhan Akan, Elena Jacobson, Dean Clark, Alexander Wu, Russell Jampol, Karen Palter, Michael Betenbaugh, Hui Zhang
Anal Chem. Author manuscript; available in PMC 2012 July 1.
Published in final edited form as: Anal Chem. 2011 July 1; 83(13): 5296–5303. Published online 2011 June 8. doi: 10.1021/ac200726q
PMCID:
PMC3128545
Free in PMC on 2012/07/01
Mapping tissue-specific expression of extracellular proteins using systematic glycoproteomic analysis of different mouse tissues
Yuan Tian, Karen S. Kelly-Spratt, Christopher J. Kemp, Hui Zhang
J Proteome Res. Author manuscript; available in PMC 2011 November 5.
Published in final edited form as: J Proteome Res. 2010 November 5; 9(11): 5837–5847. Published online 2010 October 14. doi: 10.1021/pr1006075
PMCID:
PMC2988866
Abstract Full Text PDF–1.8M Supplementary Material
Mapping tissue-specific expression of extracellular proteins using systematic glycoproteomic analysis of different mouse tissues
Yuan Tian, Karen S. Kelly-Spratt, Christopher J. Kemp, Hui Zhang
J Proteome Res. Author manuscript; available in PMC 2011 November 5.
Published in final edited form as: J Proteome Res. 2010 November 5; 9(11): 5837–5847. Published online 2010 October 14. doi: 10.1021/pr1006075
PMCID:
PMC2988866
Abstract Full Text PDF–1.8M Supplementary Material
Plasma Membrane Proteomics and Its Application in Clinical Cancer Biomarker Discovery
Rikke Leth-Larsen, Rikke R. Lund, Henrik J. Ditzel
Mol Cell Proteomics. 2010 July; 9(7): 1369–1382. Published online 2010 April 8. doi: 10.1074/mcp.R900006-MCP200
PMCID:
PMC2938092
Abstract Full Text
Evolutionary Pattern of N-Glycosylation Sequon Numbers in Eukaryotic ABC Protein Superfamilies
R. Shyama Prasad Rao, Ole Thomsen Buus, Bernd Wollenweber
Bioinform Biol Insights. 2010; 4: 9–17. Published online 2010 February 17.
PMCID:
PMC2832299
Abstract Full Text PDF–764K
Simultaneous Characterization of Glyco- and Phosphoproteomes of Mouse Brain Membrane Proteome with Electrostatic Repulsion Hydrophilic Interaction Chromatography
Huoming Zhang, Tiannan Guo, Xin Li, Arnab Datta, Jung Eun Park, Jie Yang, Sai Kiang Lim, James P. Tam, Siu Kwan Sze
Mol Cell Proteomics. 2010 April; 9(4): 635–647. Published online 2010 January 4. doi: 10.1074/mcp.M900314-MCP200
PMCID:
PMC2860239
Abstract Full Text Supplementary Material
The Mouse C2C12 Myoblast Cell Surface N-Linked Glycoproteome: IDENTIFICATION, GLYCOSITE OCCUPANCY, AND MEMBRANE ORIENTATION
Rebekah L. Gundry, Kimberly Raginski, Yelena Tarasova, Irina Tchernyshyov, Damaris Bausch-Fluck, Steven T. Elliott, Kenneth R. Boheler, Jennifer E. Van Eyk, Bernd Wollscheid
Mol Cell Proteomics. 2009 November; 8(11): 2555–2569. Published online 2009 August 4. doi: 10.1074/mcp.M900195-MCP200
PMCID:
PMC2773721
Abstract Full Text Supplementary Material
Towards an integrated proteomic and glycomic approach to finding cancer biomarkers
Allen D Taylor, William S Hancock, Marina Hincapie, Naoyuki Taniguchi, Samir M Hanash
Genome Med. 2009; 1(6): 57. Published online 2009 June 4. doi: 10.1186/gm57
PMCID:
PMC2703866
Abstract Full Text PDF–322K
N-linked glycoproteomic analysis of formalin-fixed and paraffin-embedded tissues
Yuan Tian, Kay Gurley, Danni L. Meany, Christopher J. Kemp, Hui Zhang
J Proteome Res. Author manuscript; available in PMC 2010 November 8.
Published in final edited form as: J Proteome Res. 2009 April; 8(4): 1657–1662.
PMCID:
PMC2975740
Abstract Full Text PDF–91K
Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics
Mi-Youn Brusniak, Bernd Bodenmiller, David Campbell, Kelly Cooke, James Eddes, Andrew Garbutt, Hollis Lau, Simon Letarte, Lukas N Mueller, Vagisha Sharma, Olga Vitek, Ning Zhang, Ruedi Aebersold, Julian D Watts
BMC Bioinformatics. 2008; 9: 542. Published online 2008 December 16. doi: 10.1186/1471-2105-9-542
PMCID:
PMC2651178
Abstract Full Text PDF–4.0M
Targeted Proteomic Strategy for Clinical Biomarker Discovery
Ralph Schiess, Bernd Wollscheid, Ruedi Aebersold
Mol Oncol. Author manuscript; available in PMC 2009 September 28.
Published in final edited form as: Mol Oncol. 2009 February; 3(1): 33–44. Published online 2008 December 11. doi: 10.1016/j.molonc.2008.12.001
PMCID:
PMC2753590
Abstract Full Text PDF–1.4M
Differential Plasma Glycoproteome of p19ARF Skin Cancer Mouse Model Using the Corra Label-Free LC-MS Proteomics Platform
Simon Letarte, Mi-Youn Brusniak, David Campbell, James Eddes, Christopher J. Kemp, Hollis Lau, Lukas Mueller, Alexander Schmidt, Paul Shannon, Karen S. Kelly-Spratt, Olga Vitek, Hui Zhang, Ruedi Aebersold, Julian D. Watts
Clin Proteomics. Author manuscript; available in PMC 2010 February 12.
Published in final edited form as: Clin Proteomics. 2008 December 1; 4(3-4): 105. doi: 10.1007/s12014-008-9018-8
PMCID:
PMC2821048
Abstract Full Text PDF–1.6M Supplementary Material
A novel role for proteomics in the discovery of cell-surface markers on stem cells: Scratching the surface
Rebekah L. Gundry, Kenneth R. Boheler, Jennifer E. Van Eyk, Bernd Wollscheid
Proteomics Clin Appl. Author manuscript; available in PMC 2009 June 12.
Published in final edited form as: Proteomics Clin Appl. 2008 June 12; 2(6): 892–903. doi: 10.1002/prca.200780122
PMCID:
PMC2633130
Abstract Full Text PDF–588K
PhosphoPep—a phosphoproteome resource for systems biology research in Drosophila Kc167 cells
Bernd Bodenmiller, Johan Malmstrom, Bertran Gerrits, David Campbell, Henry Lam, Alexander Schmidt, Oliver Rinner, Lukas N Mueller, Paul T Shannon, Patrick G Pedrioli, Christian Panse, Hoo-Keun Lee, Ralph Schlapbach, Ruedi Aebersold
Mol Syst Biol. 2007; 3: 139. Published online 2007 October 16. doi: 10.1038/msb4100182
PMCID:
PMC2063582
Abstract Full Text PDF–315K Supplementary Material
Solid-phase extraction of N-linked glycopeptides
Yuan Tian, Yong Zhou, Sarah Elliot, Ruedi Aebersold, Hui Zhang
Nat Protoc. Author manuscript; available in PMC 2010 November 3.
Published in final edited form as: Nat Protoc. 2007; 2(2): 334–339. doi: 10.1038/nprot.2007.42
PMCID:
PMC2971528
Abstract Full Text PDF–110K
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