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Phylogenetically widespread alternative splicing at unusual GYNGYN donors
Michael Hiller, Klaus Huse, Karol Szafranski, Philip Rosenstiel, Stefan Schreiber, Rolf Backofen, Matthias Platzer
Genome Biol. 2006; 7(7): R65. Published online 2006 July 25. doi: 10.1186/gb-2006-7-7-r65
PMCID:
PMC1779574
Abstract Full Text PDF–615K Supplementary Material
 Is Cited by the Following 7 Articles in this Archive:
The Drosophila melanogaster transcriptome by paired-end RNA sequencing
Bryce Daines, Hui Wang, Liguo Wang, Yumei Li, Yi Han, David Emmert, William Gelbart, Xia Wang, Wei Li, Richard Gibbs, Rui Chen
Genome Res. 2011 February; 21(2): 315–324. doi: 10.1101/gr.107854.110
PMCID:
PMC3032934
Abstract Full Text PDF–770K
Sequence features involved in the mechanism of 3' splice junction wobbling
Kuo-Wang Tsai, Wen-Ching Chan, Chun-Nan Hsu, Wen-chang Lin
BMC Mol Biol. 2010; 11: 34. Published online 2010 May 7. doi: 10.1186/1471-2199-11-34
PMCID:
PMC2875228
Abstract Full Text PDF–1.2M Supplementary Material
TassDB2 - A comprehensive database of subtle alternative splicing events
Rileen Sinha, Thorsten Lenser, Niels Jahn, Ulrike Gausmann, Swetlana Friedel, Karol Szafranski, Klaus Huse, Philip Rosenstiel, Jochen Hampe, Stefan Schuster, Michael Hiller, Rolf Backofen, Matthias Platzer
BMC Bioinformatics. 2010; 11: 216. Published online 2010 April 29. doi: 10.1186/1471-2105-11-216
PMCID:
PMC2878309
Abstract Full Text PDF–1.0M Supplementary Material
A space-efficient and accurate method for mapping and aligning cDNA sequences onto genomic sequence
Osamu Gotoh
Nucleic Acids Res. 2008 May; 36(8): 2630–2638. Published online 2008 May. doi: 10.1093/nar/gkn105
PMCID:
PMC2377433
Abstract Full Text PDF–200K Supplementary Material
Selection against tandem splice sites affecting structured protein regions
Michael Hiller, Karol Szafranski, Klaus Huse, Rolf Backofen, Matthias Platzer
BMC Evol Biol. 2008; 8: 89. Published online 2008 March 21. doi: 10.1186/1471-2148-8-89
PMCID:
PMC2279118
Abstract Full Text PDF–328K Supplementary Material
The Emergence of Alternative 3′ and 5′ Splice Site Exons from Constitutive Exons
Eli Koren, Galit Lev-Maor, Gil Ast
PLoS Comput Biol. 2007 May; 3(5): e95. Published online 2007 May 25. doi: 10.1371/journal.pcbi.0030095
PMCID:
PMC1876488
Abstract Full Text PDF–877K Supplementary Material
TassDB: a database of alternative tandem splice sites
Michael Hiller, Swetlana Nikolajewa, Klaus Huse, Karol Szafranski, Philip Rosenstiel, Stefan Schuster, Rolf Backofen, Matthias Platzer
Nucleic Acids Res. 2007 January; 35(Database issue): D188–D192. Published online 2006 November 16. doi: 10.1093/nar/gkl762
PMCID:
PMC1669710
Abstract Full Text PDF–378K
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