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yrGATE: a web-based gene-structure annotation tool for the identification and dissemination of eukaryotic genes
Matthew D Wilkerson, Shannon D Schlueter, Volker Brendel
Genome Biol. 2006; 7(7): R58. Published online 2006 July 19. doi: 10.1186/gb-2006-7-7-r58
PMCID:
PMC1779557
Abstract Full Text PDF–451K
 Is Cited by the Following 8 Articles in this Archive:
MaizeGDB: curation and outreach go hand-in-hand
Mary L. Schaeffer, Lisa C. Harper, Jack M. Gardiner, Carson M. Andorf, Darwin A. Campbell, Ethalinda K.S. Cannon, Taner Z. Sen, Carolyn J. Lawrence
Database (Oxford) 2011; 2011: bar022. Published online 2011 May 28. doi: 10.1093/database/bar022
PMCID:
PMC3104940
Abstract Full Text PDF–372K
Genes Identified by Visible Mutant Phenotypes Show Increased Bias toward One of Two Subgenomes of Maize
James C. Schnable, Michael Freeling
PLoS One. 2011; 6(3): e17855. Published online 2011 March 10. doi: 10.1371/journal.pone.0017855
PMCID:
PMC3053395
Abstract Full Text PDF–634K Supplementary Material
MaizeGDB becomes ‘sequence-centric’
Taner Z. Sen, Carson M. Andorf, Mary L. Schaeffer, Lisa C. Harper, Michael E. Sparks, Jon Duvick, Volker P. Brendel, Ethalinda Cannon, Darwin A. Campbell, Carolyn J. Lawrence
Database (Oxford) 2009; 2009: bap020. Published online 2009 December 7. doi: 10.1093/database/bap020
PMCID:
PMC2964019
Abstract Full Text PDF–781K
PlantGDB: a resource for comparative plant genomics
Jon Duvick, Ann Fu, Usha Muppirala, Mukul Sabharwal, Matthew D. Wilkerson, Carolyn J. Lawrence, Carol Lushbough, Volker Brendel
Nucleic Acids Res. 2008 January; 36(Database issue): D959–D965. Published online 2008 January. doi: 10.1093/nar/gkm1041
PMCID:
PMC2238959
Abstract Full Text PDF–4.7M
EuCAP, a Eukaryotic Community Annotation Package, and its application to the rice genome
Françoise Thibaud-Nissen, Matthew Campbell, John P Hamilton, Wei Zhu, C Robin Buell
BMC Genomics. 2007; 8: 388. Published online 2007 October 25. doi: 10.1186/1471-2164-8-388
PMCID:
PMC2151081
Abstract Full Text PDF–804K Supplementary Material
Gene duplication and paleopolyploidy in soybean and the implications for whole genome sequencing
Jessica A Schlueter, Jer-Young Lin, Shannon D Schlueter, Iryna F Vasylenko-Sanders, Shweta Deshpande, Jing Yi, Majesta O'Bleness, Bruce A Roe, Rex T Nelson, Brian E Scheffler, Scott A Jackson, Randy C Shoemaker
BMC Genomics. 2007; 8: 330. Published online 2007 September 19. doi: 10.1186/1471-2164-8-330
PMCID:
PMC2077340
Abstract Full Text PDF–794K Supplementary Material
Manual curation is not sufficient for annotation of genomic databases
William A. Baumgartner, Jr, K. Bretonnel Cohen, Lynne M. Fox, George Acquaah-Mensah, Lawrence Hunter
Bioinformatics. Author manuscript; available in PMC 2008 August 14.
Published in final edited form as: Bioinformatics. 2007 July 1; 23(13): i41–i48. doi: 10.1093/bioinformatics/btm229
PMCID:
PMC2516305
Abstract Full Text PDF–720K
xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features
Shannon D Schlueter, Matthew D Wilkerson, Qunfeng Dong, Volker Brendel
Genome Biol. 2006; 7(11): R111. Published online 2006 November 20. doi: 10.1186/gb-2006-7-11-r111
PMCID:
PMC1794590
Abstract Full Text PDF–2.2M
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