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Large-scale and high-confidence proteomic analysis of human seminal plasma
Bartosz Pilch, Matthias Mann
Genome Biol. 2006; 7(5): R40. Published online 2006 May 18. doi: 10.1186/gb-2006-7-5-r40
PMCID:
PMC1779515
Abstract Full Text PDF–293K Supplementary Material

Is Cited by the Following 28 Articles in this Archive:

Characterization of the seminal plasma proteome in men with prostatitis by mass spectrometry
Daniel Kagedan, Irene Lecker, Ihor Batruch, Christopher Smith, Ilia Kaploun, Kirk Lo, Ethan Grober, Eleftherios P Diamandis, Keith A Jarvi
Clin Proteomics. 2012; 9(1): 2. Published online 2012 February 6. doi: 10.1186/1559-0275-9-2
PMCID:
PMC3305567
Abstract Full Text PDF–690K Supplementary Material
Tumor Biomarker Glycoproteins in the Seminal Plasma of Healthy Human Males Are Endogenous Ligands for DC-SIGN
Gary F. Clark, Paola Grassi, Poh-Choo Pang, Maria Panico, David Lafrenz, Erma Z. Drobnis, Michael R. Baldwin, Howard R. Morris, Stuart M. Haslam, Sophia Schedin-Weiss, Wei Sun, Anne Dell
Mol Cell Proteomics. 2012 January; 11(1): M111.008730. Published online 2011 October 10. doi: 10.1074/mcp.M111.008730
PMCID:
PMC3270097
Free in PMC on 2013/01/01
Verification of Male Infertility Biomarkers in Seminal Plasma by Multiplex Selected Reaction Monitoring Assay
Andrei P. Drabovich, Keith Jarvi, Eleftherios P. Diamandis
Mol Cell Proteomics. 2011 December; 10(12): M110.004127. Published online 2011 September 20. doi: 10.1074/mcp.M110.004127
PMCID:
PMC3237065
Free in PMC on 2012/12/01
Identification of ejaculated proteins in the house mouse (Mus domesticus) via isotopic labeling
Matthew D Dean, Geoffrey D Findlay, Michael R Hoopmann, Christine C Wu, Michael J MacCoss, Willie J Swanson, Michael W Nachman
BMC Genomics. 2011; 12: 306. Published online 2011 June 10. doi: 10.1186/1471-2164-12-306
PMCID:
PMC3144466
Abstract Full Text PDF–582K Supplementary Material
EMILIN2 (Elastin microfibril interface located protein), potential modifier of thrombosis
Qila Sa, Jane L Hoover-Plow
Thromb J. 2011; 9: 9. Published online 2011 May 11. doi: 10.1186/1477-9560-9-9
PMCID:
PMC3113922
Abstract Full Text PDF–1.3M Supplementary Material
Proteomics: a subcellular look at spermatozoa
Stefan S du Plessis, Anthony H Kashou, David J Benjamin, Satya P Yadav, Ashok Agarwal
Reprod Biol Endocrinol. 2011; 9: 36. Published online 2011 March 22. doi: 10.1186/1477-7827-9-36
PMCID:
PMC3071316
Abstract Full Text PDF–2.3M
GNMT Expression Increases Hepatic Folate Contents and Folate-Dependent Methionine Synthase-Mediated Homocysteine Remethylation
Yi-Cheng Wang, Yi-Ming Chen, Yan-Jun Lin, Shih-Ping Liu, En-Pei Isabel Chiang
Mol Med. 2011 May-Jun; 17(5-6): 486–494. Published online 2011 January 3. doi: 10.2119/molmed.2010.00243
PMCID:
PMC3105148
Abstract Full Text PDF–845K
In-depth Proteomic Analyses of Direct Expressed Prostatic Secretions
Richard R. Drake, Sarah Elschenbroich, Orlay Lopez-Perez, Yunee Kim, Vladimir Ignatchenko, Alex Ignatchenko, Julius O. Nyalwidhe, Gaurav Basu, Christopher E. Wilkins, Breanne Gjurich, Raymond S. Lance, O. John Semmes, Jeffrey A. Medin, Thomas Kislinger
J Proteome Res. Author manuscript; available in PMC 2011 May 7.
Published in final edited form as: J Proteome Res. 2010 May 7; 9(5): 2109–2116. doi: 10.1021/pr1001498
PMCID:
PMC2869496
Abstract Full Text PDF–2.4M Supplementary Material
Comparative genomics and proteomics of Helicobacter mustelae, an ulcerogenic and carcinogenic gastric pathogen
Paul W O'Toole, William J Snelling, Carlos Canchaya, Brian M Forde, Kim R Hardie, Christine Josenhans, Robert LJ Graham, Geoff McMullan, Julian Parkhill, Eugenio Belda, Stephen D Bentley
BMC Genomics. 2010; 11: 164. Published online 2010 March 10. doi: 10.1186/1471-2164-11-164
PMCID:
PMC2846917
Abstract Full Text PDF–2.5M Supplementary Material
Heat shock proteins on the human sperm surface
Soren Naaby-Hansen, John C. Herr
J Reprod Immunol. Author manuscript; available in PMC 2011 January 1.
Published in final edited form as: J Reprod Immunol. 2010 January; 84(1): 32–40. Published online 2009 December 3. doi: 10.1016/j.jri.2009.09.006
PMCID:
PMC2898571
Abstract Full Text PDF–1.4M Supplementary Material
Insights into female sperm storage from the spermathecal fluid proteome of the honeybee Apis mellifera
Boris Baer, Holger Eubel, Nicolas L Taylor, Nicholas O'Toole, A Harvey Millar
Genome Biol. 2009; 10(6): R67. Published online 2009 June 18. doi: 10.1186/gb-2009-10-6-r67
PMCID:
PMC2718501
Abstract Full Text PDF–1010K Supplementary Material
Proteomics and Comparative Genomic Investigations Reveal Heterogeneity in Evolutionary Rate of Male Reproductive Proteins in Mice (Mus domesticus)
Matthew D. Dean, Nathaniel L. Clark, Geoffrey D. Findlay, Robert C. Karn, Xianhua Yi, Willie J. Swanson, Michael J. MacCoss, Michael W. Nachman
Mol Biol Evol. 2009 August; 26(8): 1733–1743. Published online 2009 May 6. doi: 10.1093/molbev/msp094
PMCID:
PMC2734151
Abstract Full Text PDF–214K Supplementary Material
Mining the Ovarian Cancer Ascites Proteome for Potential Ovarian Cancer Biomarkers
Cynthia Kuk, Vathany Kulasingam, C. Geeth Gunawardana, Chris R. Smith, Ihor Batruch, Eleftherios P. Diamandis
Mol Cell Proteomics. 2009 April; 8(4): 661–669. doi: 10.1074/mcp.M800313-MCP200
PMCID:
PMC2667349
Abstract Full Text Supplementary Material
Clinical Collection and Protein Properties of Expressed Prostatic Secretions as a Source for Biomarkers of Prostatic Disease
Richard R. Drake, Krista Y. White, Thomas W. Fuller, Elena Igwe, Mary Ann Clements, Julius O. Nyalwidhe, Robert W. Given, Raymond S. Lance, O. John Semmes
J Proteomics. Author manuscript; available in PMC 2010 August 20.
Published in final edited form as: J Proteomics. 2009 August 20; 72(6): 907–917. Published online 2009 January 20. doi: 10.1016/j.jprot.2009.01.007
PMCID:
PMC2720443
Abstract Full Text PDF–1.5M Supplementary Material
Sys-BodyFluid: a systematical database for human body fluid proteome research
Su-Jun Li, Mao Peng, Hong Li, Bo-Shu Liu, Chuan Wang, Jia-Rui Wu, Yi-Xue Li, Rong Zeng
Nucleic Acids Res. 2009 January; 37(Database issue): D907–D912. Published online 2009 January. doi: 10.1093/nar/gkn849
PMCID:
PMC2686600
Abstract Full Text PDF–4.7M
An Epididymis-Specific Secretory Protein HongrES1 Critically Regulates Sperm Capacitation and Male Fertility
Yuchuan Zhou, Min Zheng, Qixian Shi, Li Zhang, Wei Zhen, Wenying Chen, Yonglian Zhang
PLoS ONE. 2008; 3(12): e4106. Published online 2008 December 31. doi: 10.1371/journal.pone.0004106
PMCID:
PMC2606034
Abstract Full Text PDF–723K
Characterization of strategies for obtaining confident identifications in bottom-up proteomics measurements using hybrid FT MS instruments
Aleksey V. Tolmachev, Matthew E. Monroe, Samuel O. Purvine, Ronald J. Moore, Navdeep Jaitly, Joshua N. Adkins, Gordon A. Anderson, Richard D. Smith
Anal Chem. Author manuscript; available in PMC 2009 June 8.
Published in final edited form as: Anal Chem. 2008 November 15; 80(22): 8514–8525. Published online 2008 October 15. doi: 10.1021/ac801376g
PMCID:
PMC2692492
Abstract Full Text PDF–1.7M
Sperm Chromatin: Fertile Grounds for Proteomic Discovery of Clinical Tools
Tammy F. Wu, Diana S. Chu
Mol Cell Proteomics. 2008 October; 7(10): 1876–1886. doi: 10.1074/mcp.R800005-MCP200
PMCID:
PMC2559940
Abstract Full Text
A high confidence, manually validated human blood plasma protein reference set
Susann Schenk, Gary J Schoenhals, Gustavo de Souza, Matthias Mann
BMC Med Genomics. 2008; 1: 41. Published online 2008 September 15. doi: 10.1186/1755-8794-1-41
PMCID:
PMC2563020
Abstract Full Text PDF–2.4M Supplementary Material
Adaptive Evolution in Rodent Seminal Vesicle Secretion Proteins
Robert C. Karn, Nathaniel L. Clark, Eric D. Nguyen, Willie J. Swanson
Mol Biol Evol. 2008 November; 25(11): 2301–2310. Published online 2008 August 20. doi: 10.1093/molbev/msn182
PMCID:
PMC2727389
Abstract Full Text PDF–294K Supplementary Material
Applying Gene Expression, Proteomics and Single-Nucleotide Polymorphism Analysis for Complex Trait Gene Identification
Ioannis M. Stylianou, Jason P. Affourtit, Keith R. Shockley, Robert Y. Wilpan, Fadi A. Abdi, Sanjeev Bhardwaj, Jarod Rollins, Gary A Churchill, Beverly Paigen
Genetics. 2008 March; 178(3): 1795–1805. doi: 10.1534/genetics.107.081216
PMCID:
PMC2278051
Abstract Full Text PDF–799K
A nonparametric model for quality control of database search results in shotgun proteomics
Jiyang Zhang, Jianqi Li, Xin Liu, Hongwei Xie, Yunping Zhu, Fuchu He
BMC Bioinformatics. 2008; 9: 29. Published online 2008 January 21. doi: 10.1186/1471-2105-9-29
PMCID:
PMC2267700
Abstract Full Text PDF–543K Supplementary Material
Symposium: Nuclear reprogramming and the control of differentiation in mammalian embryos: Epigenetic processes implemented during spermatogenesis distinguish the paternal pronucleus in the embryo
Tammy F Wu, Diana S Chu
Reprod Biomed Online. Author manuscript; available in PMC 2010 May 24.
Published in final edited form as: Reprod Biomed Online. 2008 January; 16(1): 13–22.
PMCID:
PMC2875117
Abstract Full Text PDF–364K
Human Seminal Plasma Abrogates the Capture and Transmission of Human Immunodeficiency Virus Type 1 to CD4+ T Cells Mediated by DC-SIGN
Juan Sabatté, Ana Ceballos, Silvina Raiden, Mónica Vermeulen, Karen Nahmod, Julián Maggini, Gabriela Salamone, Horacio Salomón, Sebastian Amigorena, Jorge Geffner
J Virol. 2007 December; 81(24): 13723–13734. Published online 2007 October 3. doi: 10.1128/JVI.01079-07
PMCID:
PMC2168832
Abstract Full Text PDF–699K
High Speed Data Reduction, Feature Detection, and MS/MS Spectrum Quality Assessment of Shotgun Proteomics Datasets Using High Resolution Mass Spectrometry
Michael R. Hoopmann, Gregory L. Finney, Michael J. MacCoss
Anal Chem. Author manuscript; available in PMC 2008 September 30.
Published in final edited form as: Anal Chem. 2007 August 1; 79(15): 5620–5632. Published online 2007 June 21. doi: 10.1021/ac0700833
PMCID:
PMC2556510
Abstract Full Text PDF–2.6M
A semi-quantitative GeLC-MS analysis of temporal proteome expression in the emerging nosocomial pathogen Ochrobactrum anthropi
Robert Leslie James Graham, Mohit K Sharma, Nigel G Ternan, D Brent Weatherly, Rick L Tarleton, Geoff McMullan
Genome Biol. 2007; 8(6): R110. Published online 2007 June 13. doi: 10.1186/gb-2007-8-6-r110
PMCID:
PMC2394761
Abstract Full Text PDF–479K Supplementary Material
High-accuracy proteome maps of human body fluids
Alexander Schmidt, Ruedi Aebersold
Genome Biol. 2006; 7(11): 242. Published online 2006 November 28. doi: 10.1186/gb-2006-7-11-242
PMCID:
PMC1794581
Abstract Full Text PDF–75K
MAPU: Max-Planck Unified database of organellar, cellular, tissue and body fluid proteomes
Yanling Zhang, Yong Zhang, Jun Adachi, Jesper V. Olsen, Rong Shi, Gustavo de Souza, Erica Pasini, Leonard J. Foster, Boris Macek, Alexandre Zougman, Chanchal Kumar, Jacek R. Wiśniewski, Wang Jun, Matthias Mann
Nucleic Acids Res. 2007 January; 35(Database issue): D771–D779. Published online 2006 November 7. doi: 10.1093/nar/gkl784
PMCID:
PMC1781136
Abstract Full Text PDF–628K
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