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The success (or not) of HUGO nomenclature
Javier Tamames, Alfonso Valencia
Genome Biol. 2006; 7(5): 402. Published online 2006 May 15. doi: 10.1186/gb-2006-7-5-402
PMCID:
PMC1779514
Abstract Full Text PDF–115K
 Is Cited by the Following 9 Articles in this Archive:
pubmed2ensembl: A Resource for Mining the Biological Literature on Genes
Joachim Baran, Martin Gerner, Maximilian Haeussler, Goran Nenadic, Casey M. Bergman
PLoS One. 2011; 6(9): e24716. Published online 2011 September 29. doi: 10.1371/journal.pone.0024716
PMCID:
PMC3183000
Abstract Full Text PDF–857K Supplementary Material
The GNAT library for local and remote gene mention normalization
Jörg Hakenberg, Martin Gerner, Maximilian Haeussler, Illés Solt, Conrad Plake, Michael Schroeder, Graciela Gonzalez, Goran Nenadic, Casey M. Bergman
Bioinformatics. 2011 October 1; 27(19): 2769–2771. Published online 2011 August 3. doi: 10.1093/bioinformatics/btr455
PMCID:
PMC3179658
Abstract Full Text PDF–151K
Moara: a Java library for extracting and normalizing gene and protein mentions
Mariana L Neves, José-María Carazo, Alberto Pascual-Montano
BMC Bioinformatics. 2010; 11: 157. Published online 2010 March 26. doi: 10.1186/1471-2105-11-157
PMCID:
PMC2851609
Abstract Full Text PDF–3.1M
From protein sequences to 3D-structures and beyond: the example of the UniProt Knowledgebase
Ursula Hinz, The UniProt Consortium
Cell Mol Life Sci. 2010 April; 67(7): 1049–1064. Published online 2009 December 31. doi: 10.1007/s00018-009-0229-6
PMCID:
PMC2835715
Abstract Full Text PDF–427K
aGEM: an integrative system for analyzing spatial-temporal gene-expression information
Natalia Jiménez-Lozano, Joan Segura, José Ramón Macías, Juanjo Vega, José María Carazo
Bioinformatics. 2009 October 1; 25(19): 2566–2572. Published online 2009 July 9. doi: 10.1093/bioinformatics/btp422
PMCID:
PMC2752607
Abstract Full Text PDF–266K Supplementary Material
Identification of histone modifications in biomedical text for supporting epigenomic research
Corinna Kolářik, Roman Klinger, Martin Hofmann-Apitius
BMC Bioinformatics. 2009; 10(Suppl 1): S28. Published online 2009 January 30. doi: 10.1186/1471-2105-10-S1-S28
PMCID:
PMC2648793
Abstract Full Text PDF–324K
Linking genes to literature: text mining, information extraction, and retrieval applications for biology
Martin Krallinger, Alfonso Valencia, Lynette Hirschman
Genome Biol. 2008; 9(Suppl 2): S8. Published online 2008 September 1. doi: 10.1186/gb-2008-9-s2-s8
PMCID:
PMC2559992
Abstract Full Text PDF–2.6M
iHOP web services
José M. Fernández, Robert Hoffmann, Alfonso Valencia
Nucleic Acids Res. 2007 July; 35(Web Server issue): W21–W26. Published online 2007 July. doi: 10.1093/nar/gkm298
PMCID:
PMC1933131
Abstract Full Text PDF–626K
Taste Receptor Genes
Alexander A. Bachmanov, Gary K. Beauchamp
Annu Rev Nutr. Author manuscript; available in PMC 2009 August 5.
Published in final edited form as: Annu Rev Nutr. 2007; 27: 389–414. doi: 10.1146/annurev.nutr.26.061505.111329
PMCID:
PMC2721271
Abstract Full Text PDF–229K Supplementary Material
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