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Genes regulated by estrogen in breast tumor cells in vitro are similarly regulated in vivo in tumor xenografts and human breast tumors
Chad J Creighton, Kevin E Cordero, Jose M Larios, Rebecca S Miller, Michael D Johnson, Arul M Chinnaiyan, Marc E Lippman, James M Rae
Genome Biol. 2006; 7(4): R28. Published online 2006 April 7. doi: 10.1186/gb-2006-7-4-r28
PMCID:
PMC1557996
Abstract Full Text PDF–2.3M Supplementary Material

Is Cited by the Following 29 Articles in this Archive:

Meta-analysis of estrogen response in MCF-7 distinguishes early target genes involved in signaling and cell proliferation from later target genes involved in cell cycle and DNA repair
Vidhya Jagannathan, Marc Robinson-Rechavi
BMC Syst Biol. 2011; 5: 138. Published online 2011 August 30. doi: 10.1186/1752-0509-5-138
PMCID:
PMC3225231
Abstract Full Text PDF–1.6M Supplementary Material
Motif-guided sparse decomposition of gene expression data for regulatory module identification
Ting Gong, Jianhua Xuan, Li Chen, Rebecca B Riggins, Huai Li, Eric P Hoffman, Robert Clarke, Yue Wang
BMC Bioinformatics. 2011; 12: 82. Published online 2011 March 22. doi: 10.1186/1471-2105-12-82
PMCID:
PMC3072956
Abstract Full Text PDF–1.1M Supplementary Material
CARM1 is an important determinant of ERα-dependent breast cancer cell differentiation and proliferation in breast cancer cells
Mariam Al-Dhaheri, Jiacai Wu, Georgios P. Skliris, Jun Li, Ken Higashimato, Yidan wang, Kevin P. White, Paul Lambert, Yuerong Zhu, Leigh Murphy, Wei Xu
Cancer Res. Author manuscript; available in PMC 2012 March 15.
Published in final edited form as: Cancer Res. 2011 March 15; 71(6): 2118–2128. Published online 2011 January 31. doi: 10.1158/0008-5472.CAN-10-2426
PMCID:
PMC3076802
Abstract Full Text PDF–2.3M Supplementary Material
Estrogen regulation of X-box binding protein-1 and its role in estrogen induced growth of breast and endometrial cancer cells
Surojeet Sengupta, Catherine G.N. Sharma, V. Craig Jordan
Horm Mol Biol Clin Investig. Author manuscript; available in PMC 2011 August 1.
Published in final edited form as: Horm Mol Biol Clin Investig. 2010 August 1; 2(2): 235–243. doi: 10.1515/HMBCI.2010.025
PMCID:
PMC3032413
Abstract Full Text PDF–688K
Changes in expression of oestrogen regulated and proliferation genes with neoadjuvant treatment highlight heterogeneity of clinical resistance to the aromatase inhibitor, letrozole
William R Miller, Alexey Larionov
Breast Cancer Res. 2010; 12(4): R52. Published online 2010 July 20. doi: 10.1186/bcr2611
PMCID:
PMC2949641
Abstract Full Text PDF–420K Supplementary Material
Dynamic changes in gene expression in vivo predict prognosis of tamoxifen-treated patients with breast cancer
Karen J Taylor, Andrew H Sims, Liang Liang, Dana Faratian, Morwenna Muir, Graeme Walker, Barbara Kuske, J Michael Dixon, David A Cameron, David J Harrison, Simon P Langdon
Breast Cancer Res. 2010; 12(3): R39. Published online 2010 June 22. doi: 10.1186/bcr2593
PMCID:
PMC2917034
Abstract Full Text PDF–2.0M Supplementary Material
Multilevel support vector regression analysis to identify condition-specific regulatory networks
Li Chen, Jianhua Xuan, Rebecca B. Riggins, Yue Wang, Eric P. Hoffman, Robert Clarke
Bioinformatics. 2010 June 1; 26(11): 1416–1422. Published online 2010 April 7. doi: 10.1093/bioinformatics/btq144
PMCID:
PMC2872001
Abstract Full Text PDF–342K Supplementary Material
Histone Deacetylase 7 and FoxA1 in Estrogen-Mediated Repression of RPRM
Simeen Malik, Shiming Jiang, Jason P. Garee, Eric Verdin, Adrian V. Lee, Bert W. O'Malley, Mao Zhang, Narasimhaswamy S. Belaguli, Steffi Oesterreich
Mol Cell Biol. 2010 January; 30(2): 399–412. Published online 2009 November 16. doi: 10.1128/MCB.00907-09
PMCID:
PMC2798473
Abstract Full Text PDF–2.4M Supplementary Material
SAFB1 Mediates Repression of Immune Regulators and Apoptotic Genes in Breast Cancer Cells
Stephanie Hammerich-Hille, Benny A. Kaipparettu, Anna Tsimelzon, Chad J. Creighton, Shiming Jiang, Jose M. Polo, Ari Melnick, Rene Meyer, Steffi Oesterreich
J Biol Chem. 2010 February 5; 285(6): 3608–3616. Published online 2009 November 9. doi: 10.1074/jbc.M109.066431
PMCID:
PMC2823501
Abstract Full Text Supplementary Material
Pregnancy in the mature adult mouse does not alter the proportion of mammary epithelial stem/progenitor cells
Kara L Britt, Howard Kendrick, Joseph L Regan, Gemma Molyneux, Fiona-Ann Magnay, Alan Ashworth, Matthew J Smalley
Breast Cancer Res. 2009; 11(2): R20. Published online 2009 April 23. doi: 10.1186/bcr2245
PMCID:
PMC2688949
Abstract Full Text PDF–4.8M Supplementary Material
Genetic Ablation of Caveolin-1 Drives Estrogen-Hypersensitivity and the Development of DCIS-Like Mammary Lesions
Isabelle Mercier, Mathew C. Casimiro, Jie Zhou, Chenguang Wang, Christopher Plymire, Kelly G. Bryant, Kristin M. Daumer, Federica Sotgia, Gloria Bonuccelli, Agnieszka K. Witkiewicz, Justin Lin, Thai Hong Tran, Janet Milliman, Philippe G. Frank, Jean-François Jasmin, Hallgeir Rui, Richard G. Pestell, Michael P. Lisanti
Am J Pathol. 2009 April; 174(4): 1172–1190. doi: 10.2353/ajpath.2009.080882
PMCID:
PMC2671351
Abstract Full Text PDF–7.7M Supplementary Material
Meta-Analysis and Gene Set Enrichment Relative to ER Status Reveal Elevated Activity of MYC and E2F in the “Basal” Breast Cancer Subgroup
M. Chehani Alles, Margaret Gardiner-Garden, David J. Nott, Yixin Wang, John A. Foekens, Robert L. Sutherland, Elizabeth A. Musgrove, Christopher J. Ormandy
PLoS ONE. 2009; 4(3): e4710. Published online 2009 March 9. doi: 10.1371/journal.pone.0004710
PMCID:
PMC2650420
Abstract Full Text PDF–949K Supplementary Material
Caveolin-1−/− Null Mammary Stromal Fibroblasts Share Characteristics with Human Breast Cancer-Associated Fibroblasts
Federica Sotgia, Francesco Del Galdo, Mathew C. Casimiro, Gloria Bonuccelli, Isabelle Mercier, Diana Whitaker-Menezes, Kristin M. Daumer, Jie Zhou, Chenguang Wang, Sanjay Katiyar, Huan Xu, Emily Bosco, Andrew A. Quong, Bruce Aronow, Agnieszka K. Witkiewicz, Carlo Minetti, Philippe G. Frank, Sergio A. Jimenez, Erik S. Knudsen, Richard G. Pestell, Michael P. Lisanti
Am J Pathol. 2009 March; 174(3): 746–761. doi: 10.2353/ajpath.2009.080658
PMCID:
PMC2665737
Abstract Full Text PDF–4.1M Supplementary Material
Gene Network Signaling in Hormone Responsiveness Modifies Apoptosis and Autophagy in Breast Cancer Cells
Robert Clarke, Ayesha N. Shajahan, Rebecca B. Riggins, Younsook Cho, Anatasha Crawford, Jianhua Xuan, Yue Wang, Alan Zwart, Ruchi Nehra, Minetta C. Liu
J Steroid Biochem Mol Biol. Author manuscript; available in PMC 2010 March 1.
Published in final edited form as: J Steroid Biochem Mol Biol. 2009 March; 114(1-2): 8–20. doi: 10.1016/j.jsbmb.2008.12.023
PMCID:
PMC2768542
Abstract Full Text PDF–662K
GEMS (Gene Expression MetaSignatures), a web resource for querying meta-analysis of expression microarray datasets: 17β-estradiol in MCF-7 cells
Scott A. Ochsner, David L. Steffen, Susan G. Hilsenbeck, Edward S. Chen, Christopher Watkins, Neil J. McKenna
Cancer Res. Author manuscript; available in PMC 2010 January 1.
Published in final edited form as: Cancer Res. 2009 January 1; 69(1): 23–26. doi: 10.1158/0008-5472.CAN-08-3492
PMCID:
PMC2782370
Abstract Full Text PDF–152K Supplementary Material
Transcriptome analysis of mammary epithelial subpopulations identifies novel determinants of lineage commitment and cell fate
Howard Kendrick, Joseph L Regan, Fiona-Ann Magnay, Anita Grigoriadis, Costas Mitsopoulos, Marketa Zvelebil, Matthew J Smalley
BMC Genomics. 2008; 9: 591. Published online 2008 December 8. doi: 10.1186/1471-2164-9-591
PMCID:
PMC2629782
Abstract Full Text PDF–4.6M Supplementary Material
A bioinformatics tool for linking gene expression profiling results with public databases of microRNA target predictions
Chad J. Creighton, Ankur K. Nagaraja, Samir M. Hanash, Martin M. Matzuk, Preethi H. Gunaratne
RNA. 2008 November; 14(11): 2290–2296. doi: 10.1261/rna.1188208
PMCID:
PMC2578856
Abstract Full Text PDF–504K
Ageing, oxidative stress and cancer: paradigms in parallax
Christopher C. Benz, Christina Yau
Nat Rev Cancer. Author manuscript; available in PMC 2009 May 1.
Published in final edited form as: Nat Rev Cancer. 2008 November; 8(11): 875–879. doi: 10.1038/nrc2522
PMCID:
PMC2603471
Abstract Full Text PDF–1.2M
Development of resistance to targeted therapies transforms the clinically-associated molecular profile subtype of breast tumor xenografts
Chad J. Creighton, Suleiman Massarweh, Shixia Huang, Anna Tsimelzon, Jiang Shou, Luca Malorni, Susan G. Hilsenbeck, C. Kent Osborne, Rachel Schiff
Cancer Res. Author manuscript; available in PMC 2009 September 15.
Published in final edited form as: Cancer Res. 2008 September 15; 68(18): 7493–7501. doi: 10.1158/0008-5472.CAN-08-1404
PMCID:
PMC2556890
Abstract Full Text PDF–1.7M Supplementary Material
Insulin-Like Growth Factor-I Activates Gene Transcription Programs Strongly Associated With Poor Breast Cancer Prognosis
Chad J. Creighton, Angelo Casa, ZaWaunyka Lazard, Shixia Huang, Anna Tsimelzon, Susan G. Hilsenbeck, Charles Kent Osborne, Adrian V. Lee
J Clin Oncol. 2008 September 1; 26(25): 4078–4085. doi: 10.1200/JCO.2007.13.4429
PMCID:
PMC2654368
Abstract Full Text PDF–2.4M Supplementary Material
Genes responsive to both oxidant stress and loss of estrogen receptor function identify a poor prognosis group of estrogen receptor positive primary breast cancers
Christina Yau, Christopher C Benz
Breast Cancer Res. 2008; 10(4): R61. Published online 2008 July 17. doi: 10.1186/bcr2120
PMCID:
PMC2575534
Abstract Full Text PDF–1.7M Supplementary Material
Genomics of Signaling Crosstalk of Estrogen Receptor α in Breast Cancer Cells
Peter Dudek, Didier Picard
PLoS ONE. 2008; 3(3): e1859. Published online 2008 March 26. doi: 10.1371/journal.pone.0001859
PMCID:
PMC2268000
Abstract Full Text PDF–535K Supplementary Material
Multiple Oncogenic Pathway Signatures Show Coordinate Expression Patterns in Human Prostate Tumors
Chad J. Creighton
PLoS ONE. 2008; 3(3): e1816. Published online 2008 March 19. doi: 10.1371/journal.pone.0001816
PMCID:
PMC2263127
Abstract Full Text PDF–424K Supplementary Material
A Transcriptional Fingerprint of Estrogen in Human Breast Cancer Predicts Patient Survival
Jianjun Yu, Jindan Yu, Kevin E Cordero, Michael D Johnson, Debashis Ghosh, James M Rae, Arul M Chinnaiyan, Marc E Lippman
Neoplasia. 2008 January; 10(1): 79–88.
PMCID:
PMC2213902
Abstract Full Text PDF–1.4M Supplementary Material
Mechanisms of primary and secondary estrogen target gene regulation in breast cancer cells
Véronique Bourdeau, Julie Deschênes, David Laperrière, Malika Aid, John H. White, Sylvie Mader
Nucleic Acids Res. 2008 January; 36(1): 76–93. Published online 2008 January. doi: 10.1093/nar/gkm945
PMCID:
PMC2248750
Abstract Full Text PDF–489K
An Expression Signature Of Estrogen-Regulated Genes Predicts Disease-Free Survival In Tamoxifen-Treated Patients Better Than Progesterone Receptor Status
Marc E. Lippman, James M. Rae, Arul M. Chinnaiyan
Trans Am Clin Climatol Assoc. 2008; 119: 77–92.
PMCID:
PMC2442700
Abstract Full Text PDF–1.2M
Do classical oestrogen markers predict for clinical response to endocrine therapy?
William R Miller
Breast Cancer Res. 2007; 9(Suppl 2): S19. Published online 2007 December 20. doi: 10.1186/bcr1817
PMCID:
PMC2230527
Full Text PDF–255K
Aging impacts transcriptomes but not genomes of hormone-dependent breast cancers
Christina Yau, Vita Fedele, Ritu Roydasgupta, Jane Fridlyand, Alan Hubbard, Joe W Gray, Karen Chew, Shanaz H Dairkee, Dan H Moore, Francesco Schittulli, Stefania Tommasi, Angelo Paradiso, Donna G Albertson, Christopher C Benz
Breast Cancer Res. 2007; 9(5): R59. Published online 2007 September 12. doi: 10.1186/bcr1765
PMCID:
PMC2216076
Abstract Full Text PDF–4.1M Supplementary Material
A gene transcription signature associated with hormone independence in a subset of both breast and prostate cancers
Chad J Creighton
BMC Genomics. 2007; 8: 199. Published online 2007 June 28. doi: 10.1186/1471-2164-8-199
PMCID:
PMC1914359
Abstract Full Text PDF–2.3M Supplementary Material
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