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Comparative evaluation of linear and exponential amplification techniques for expression profiling at the single-cell level
Tatiana Subkhankulova, Frederick J Livesey
Genome Biol. 2006; 7(3): R18. Published online 2006 March 7. doi: 10.1186/gb-2006-7-3-r18
PMCID:
PMC1557751
Abstract Full Text PDF–21M
 Is Cited by the Following 15 Articles in this Archive:
Accurate Expression Profiling of Very Small Cell Populations
Eva Gonzalez-Roca, Xabier Garcia-Albéniz, Silvia Rodriguez-Mulero, Roger R. Gomis, Karl Kornacker, Herbert Auer
PLoS One. 2010; 5(12): e14418. Published online 2010 December 28. doi: 10.1371/journal.pone.0014418
PMCID:
PMC3010985
Abstract Full Text PDF–1.2M Supplementary Material
Amplification-free digital gene expression profiling from minute cell quantities
Fatih Ozsolak, David T Ting, Ben S Wittner, Brian W Brannigan, Suchismita Paul, Nabeel Bardeesy, Sridhar Ramaswamy, Patrice M Milos, Daniel A Haber
Nat Methods. Author manuscript; available in PMC 2010 November 8.
Published in final edited form as: Nat Methods. 2010 August; 7(8): 619–621. Published online 2010 July 18. doi: 10.1038/nmeth.1480
PMCID:
PMC2975601
Abstract Full Text PDF–86K Supplementary Material
Grouping and Classifying Electrophysiologically-Defined Classes of Neocortical Neurons by Single Cell, Whole-Genome Expression Profiling
Tatiana Subkhankulova, Kojiro Yano, Hugh P. C. Robinson, Frederick J. Livesey
Front Mol Neurosci. 2010; 3: 10. Prepublished online 2009 December 4. Published online 2010 April 13. doi: 10.3389/fnmol.2010.00010
PMCID:
PMC2859851
Abstract Full Text PDF–3.1M
Digital transcriptome profiling from attomole-level RNA samples
Fatih Ozsolak, Alon Goren, Melissa Gymrek, Mitchell Guttman, Aviv Regev, Bradley E. Bernstein, Patrice M. Milos
Genome Res. 2010 April; 20(4): 519–525. doi: 10.1101/gr.102129.109
PMCID:
PMC2847755
Abstract Full Text PDF–318K
A comparison of RNA amplification techniques at sub-nanogram input concentration
Julie E Lang, Mark Jesus M Magbanua, Janet H Scott, G Mike Makrigiorgos, Gang Wang, Scot Federman, Laura J Esserman, John W Park, Christopher M Haqq
BMC Genomics. 2009; 10: 326. Published online 2009 July 20. doi: 10.1186/1471-2164-10-326
PMCID:
PMC2724417
Abstract Full Text PDF–264K Supplementary Material
Extensive molecular differences between anterior- and posterior-half-sclerotomes underlie somite polarity and spinal nerve segmentation
Daniel ST Hughes, Roger J Keynes, David Tannahill
BMC Dev Biol. 2009; 9: 30. Published online 2009 May 22. doi: 10.1186/1471-213X-9-30
PMCID:
PMC2693541
Abstract Full Text PDF–1.3M Supplementary Material
Prolonged illumination up-regulates arrestin and two guanylate cyclase activating proteins: a novel mechanism for light adaptation
Paolo Codega, Luca Della Santina, Claudia Gargini, Diana E Bedolla, Tatiana Subkhankulova, Frederick J Livesey, Luigi Cervetto, Vincent Torre
J Physiol. 2009 June 1; 587(Pt 11): 2457–2472. Published online 2009 March 30. doi: 10.1113/jphysiol.2009.168609
PMCID:
PMC2714013
Abstract Full Text PDF–887K
Biomphalaria glabrata transcriptome: cDNA microarray profiling identifies resistant- and susceptible-specific gene expression in haemocytes from snail strains exposed to Schistosoma mansoni
Anne E Lockyer, Jenny Spinks, Richard A Kane, Karl F Hoffmann, Jennifer M Fitzpatrick, David Rollinson, Leslie R Noble, Catherine S Jones
BMC Genomics. 2008; 9: 634. Published online 2008 December 29. doi: 10.1186/1471-2164-9-634
PMCID:
PMC2631019
Abstract Full Text PDF–421K Supplementary Material
Quantification of mRNA in single cells and modelling of RT-qPCR induced noise
Martin Bengtsson, Martin Hemberg, Patrik Rorsman, Anders Ståhlberg
BMC Mol Biol. 2008; 9: 63. Published online 2008 July 17. doi: 10.1186/1471-2199-9-63
PMCID:
PMC2483285
Abstract Full Text PDF–1.2M Supplementary Material
The transcriptome of retinal Müller glial cells
Karin Roesch, Ashutosh P Jadhav, Jeffrey M Trimarchi, Michael B Stadler, Botond Roska, Ben B Sun, Constance L Cepko
J Comp Neurol. 2008 July 10; 509(2): 225–238. doi: 10.1002/cne.21730
PMCID:
PMC2665263
Abstract Full Text PDF–4.3M
Modelling and measuring single cell RNA expression levels find considerable transcriptional differences among phenotypically identical cells
Tatiana Subkhankulova, Michael J Gilchrist, Frederick J Livesey
BMC Genomics. 2008; 9: 268. Published online 2008 June 3. doi: 10.1186/1471-2164-9-268
PMCID:
PMC2429916
Abstract Full Text PDF–455K Supplementary Material
Reference genes for normalization of gene expression studies in human osteoarthritic articular cartilage
Manuel Pombo-Suarez, Manuel Calaza, Juan J Gomez-Reino, Antonio Gonzalez
BMC Mol Biol. 2008; 9: 17. Published online 2008 January 29. doi: 10.1186/1471-2199-9-17
PMCID:
PMC2248200
Abstract Full Text PDF–283K
Amplification biases: possible differences among deviating gene expressions
Séverine A Degrelle, Christelle Hennequet-Antier, Hélène Chiapello, Karine Piot-Kaminski, Francois Piumi, Stéphane Robin, Jean-Paul Renard, Isabelle Hue
BMC Genomics. 2008; 9: 46. Published online 2008 January 28. doi: 10.1186/1471-2164-9-46
PMCID:
PMC2257942
Abstract Full Text PDF–1.3M Supplementary Material
Gene response profiles for Daphnia pulex exposed to the environmental stressor cadmium reveals novel crustacean metallothioneins
Joseph R Shaw, John K Colbourne, Jennifer C Davey, Stephen P Glaholt, Thomas H Hampton, Celia Y Chen, Carol L Folt, Joshua W Hamilton
BMC Genomics. 2007; 8: 477. Published online 2007 December 21. doi: 10.1186/1471-2164-8-477
PMCID:
PMC2234263
Abstract Full Text PDF–1.0M
Electrophysiological and gene expression profiling of neuronal cell types in mammalian neocortex
Kojiro Yano, Tatiana Subkhankulova, Frederick J Livesey, Hugh P C Robinson
J Physiol. 2006 September 1; 575(Pt 2): 361–365. Published online 2006 July 13. doi: 10.1113/jphysiol.2006.113712
PMCID:
PMC1819463
Abstract Full Text PDF–265K
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