My NCBISign In
Classification and risk stratification of invasive breast carcinomas using a real-time quantitative RT-PCR assay
Laurent Perreard, Cheng Fan, John F Quackenbush, Michael Mullins, Nicholas P Gauthier, Edward Nelson, Mary Mone, Heidi Hansen, Saundra S Buys, Karen Rasmussen, Alejandra Ruiz Orrico, Donna Dreher, Rhonda Walters, Joel Parker, Zhiyuan Hu, Xiaping He, Juan P Palazzo, Olufunmilayo I Olopade, Aniko Szabo, Charles M Perou, Philip S Bernard
Breast Cancer Res. 2006; 8(2): R23. Published online 2006 April 20. doi: 10.1186/bcr1399
PMCID:
PMC1557722
Abstract Full Text PDF–1.4M Supplementary Material

Is Cited by the Following 30 Articles in this Archive:

Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer
Gary C. Hon, R. David Hawkins, Otavia L. Caballero, Christine Lo, Ryan Lister, Mattia Pelizzola, Armand Valsesia, Zhen Ye, Samantha Kuan, Lee E. Edsall, Anamaria Aranha Camargo, Brian J. Stevenson, Joseph R. Ecker, Vineet Bafna, Robert L. Strausberg, Andrew J. Simpson, Bing Ren
Genome Res. 2012 February; 22(2): 246–258. doi: 10.1101/gr.125872.111
PMCID:
PMC3266032
Free in PMC on 2012/08/01
Basal Breast Cancer: A Complex and Deadly Molecular Subtype
F Bertucci, P Finetti, D Birnbaum
Curr Mol Med. 2012 January; 12(1): 96–110. Published online 2012 January. doi: 10.2174/156652412798376134
PMCID:
PMC3343384
Abstract Full Text PDF–871K
Breast cancer — one term, many entities?
Nicholas R. Bertos, Morag Park
J Clin Invest. 2011 October 3; 121(10): 3789–3796. Published online 2011 October 3. doi: 10.1172/JCI57100
PMCID:
PMC3195465
Abstract Full Text PDF–1.8M
The Changing Role of Pathology in Breast Cancer Diagnosis and Treatment
Anthony S.-Y. Leong, Zhengping Zhuang
Pathobiology. 2011 June; 78(2): 99–114. doi: 10.1159/000292644
PMCID:
PMC3128144
Free in PMC on 2012/06/01
Prolactin-induced mouse mammary carcinomas model estrogen resistant luminal breast cancer
Lisa M Arendt, Debra E Rugowski, Tara A Grafwallner-Huseth, Maria Jose Garcia-Barchino, Hallgeir Rui, Linda A Schuler
Breast Cancer Res. 2011; 13(1): R11. Published online 2011 January 28. doi: 10.1186/bcr2819
PMCID:
PMC3109579
Abstract Full Text PDF–2.3M Supplementary Material
Building prognostic models for breast cancer patients using clinical variables and hundreds of gene expression signatures
Cheng Fan, Aleix Prat, Joel S Parker, Yufeng Liu, Lisa A Carey, Melissa A Troester, Charles M Perou
BMC Med Genomics. 2011; 4: 3. Published online 2011 January 9. doi: 10.1186/1755-8794-4-3
PMCID:
PMC3025826
Abstract Full Text PDF–1.5M Supplementary Material
Minireview: Basal-Like Breast Cancer: From Molecular Profiles to Targeted Therapies
Daniel J. Toft, Vincent L. Cryns
Mol Endocrinol. 2011 February; 25(2): 199–211. Published online 2010 September 22. doi: 10.1210/me.2010-0164
PMCID:
PMC3035993
Abstract Full Text
Basal keratin expression in breast cancer by quantification of mRNA and by immunohistochemistry
Radzislaw Kordek, Piotr Potemski, Renata Kusinska, Elzbieta Pluciennik, Andrzej Bednarek
J Exp Clin Cancer Res. 2010; 29(1): 39. Published online 2010 April 28. doi: 10.1186/1756-9966-29-39
PMCID:
PMC2873424
Abstract Full Text PDF–548K
The transcriptional coregulator RIP140 represses E2F1 activity and discriminates breast cancer subtypes
Aurélie Docquier, Pierre-Olivier Harmand, Samuel Fritsch, Maia Chanrion, Jean-Marie Darbon, Vincent Cavailles
Clin Cancer Res. Author manuscript; available in PMC 2011 June 13.
Published in final edited form as: Clin Cancer Res. 2010 June; 16(11): 2959–2970. Published online 2010 April 21. doi: 10.1158/1078-0432.CCR-09-3153
PMCID:
PMC3112174
Abstract Full Text PDF–1.0M
SWISS MADE: Standardized WithIn Class Sum of Squares to Evaluate Methodologies and Dataset Elements
Christopher R. Cabanski, Yuan Qi, Xiaoying Yin, Eric Bair, Michele C. Hayward, Cheng Fan, Jianying Li, Matthew D. Wilkerson, J. S. Marron, Charles M. Perou, D. Neil Hayes
PLoS One. 2010; 5(3): e9905. Published online 2010 March 26. doi: 10.1371/journal.pone.0009905
PMCID:
PMC2845619
Abstract Full Text PDF–914K Supplementary Material
Can Survival Prediction Be Improved By Merging Gene Expression Data Sets?
Haleh Yasrebi, Peter Sperisen, Viviane Praz, Philipp Bucher
PLoS One. 2009; 4(10): e7431. Published online 2009 October 23. doi: 10.1371/journal.pone.0007431
PMCID:
PMC2761544
Abstract Full Text PDF–645K Supplementary Material
Confounding Effects in “A Six-Gene Signature Predicting Breast Cancer Lung Metastasis”
Aedín C. Culhane, John Quackenbush
Cancer Res. Author manuscript; available in PMC 2011 July 4.
Published in final edited form as: Cancer Res. 2009 September 15; 69(18): 7480–7485. Published online 2009 September 1. doi: 10.1158/0008-5472.CAN-08-3350
PMCID:
PMC3128918
Abstract Full Text PDF–332K Supplementary Material
Triple negative breast carcinoma is a prognostic factor in Taiwanese women
Che Lin, Su-Yu Chien, Li-Sheng Chen, Shou-Jen Kuo, Tsai-Wang Chang, Dar-Ren Chen
BMC Cancer. 2009; 9: 192. Published online 2009 June 18. doi: 10.1186/1471-2407-9-192
PMCID:
PMC2706258
Abstract Full Text PDF–297K
Characterization of a Naturally Occurring Breast Cancer Subset Enriched in Epithelial-to-Mesenchymal Transition and Stem Cell Characteristics
Bryan T. Hennessy, Ana-Maria Gonzalez-Angulo, Katherine Stemke-Hale, Michael Z. Gilcrease, Savitri Krishnamurthy, Ju-Seog Lee, Jane Fridlyand, Aysegul Sahin, Roshan Agarwal, Corwin Joy, Wenbin Liu, David Stivers, Keith Baggerly, Mark Carey, Ana Lluch, Carlos Monteagudo, Xiaping He, Victor Weigman, Cheng Fan, Juan Palazzo, Gabriel N. Hortobagyi, Laura K. Nolden, Nicholas J. Wang, Vicente Valero, Joe W. Gray, Charles M. Perou, Gordon B. Mills
Cancer Res. Author manuscript; available in PMC 2010 May 15.
Published in final edited form as: Cancer Res. 2009 May 15; 69(10): 4116–4124. Published online 2009 May 12. doi: 10.1158/0008-5472.CAN-08-3441
PMCID:
PMC2737191
Abstract Full Text PDF–2.7M
Prediction of breast cancer metastasis by genomic profiling: where do we stand?
Ulrich Pfeffer, Francesco Romeo, Douglas M. Noonan, Adriana Albini
Clin Exp Metastasis. 2009 August; 26(6): 547–558. Published online 2009 March 24. doi: 10.1007/s10585-009-9254-y
PMCID:
PMC2717389
Abstract Full Text PDF–595K
Supervised Risk Predictor of Breast Cancer Based on Intrinsic Subtypes
Joel S. Parker, Michael Mullins, Maggie C.U. Cheang, Samuel Leung, David Voduc, Tammi Vickery, Sherri Davies, Christiane Fauron, Xiaping He, Zhiyuan Hu, John F. Quackenbush, Inge J. Stijleman, Juan Palazzo, J.S. Marron, Andrew B. Nobel, Elaine Mardis, Torsten O. Nielsen, Matthew J. Ellis, Charles M. Perou, Philip S. Bernard
J Clin Oncol. 2009 March 10; 27(8): 1160–1167. Published online 2009 February 9. doi: 10.1200/JCO.2008.18.1370
PMCID:
PMC2667820
Abstract Full Text PDF–214K Supplementary Material
The Macrophage Colony Stimulating Factor-1 Response Signature in Breast Carcinoma
Andrew H Beck, Inigo Espinosa, Badreddin Edris, Rui Li, Kelli Montgomery, Shirley Zhu, Sushama Varma, Robert J Marinelli, Matt van de Rijn, Robert B West
Clin Cancer Res. Author manuscript; available in PMC 2010 November 18.
Published in final edited form as: Clin Cancer Res. 2009 February 1; 15(3): 778–787. doi: 10.1158/1078-0432.CCR-08-1283
PMCID:
PMC2987696
Abstract Full Text PDF–1.7M Supplementary Material
Expression of centromere protein F (CENP-F) associated with higher FDG uptake on PET/CT, detected by cDNA microarray, predicts high-risk patients with primary breast cancer
Shigeto Ueda, Nobuo Kondoh, Hitoshi Tsuda, Souhei Yamamoto, Hideki Asakawa, Kazuhiko Fukatsu, Takayuki Kobayashi, Junji Yamamoto, Katsumi Tamura, Jiro Ishida, Yoshiyuki Abe, Mikio Yamamoto, Hidetaka Mochizuki
BMC Cancer. 2008; 8: 384. Published online 2008 December 22. doi: 10.1186/1471-2407-8-384
PMCID:
PMC2631591
Abstract Full Text PDF–697K
The functional loss of the retinoblastoma tumour suppressor is a common event in basal-like and luminal B breast carcinomas
Jason I Herschkowitz, Xiaping He, Cheng Fan, Charles M Perou
Breast Cancer Res. 2008; 10(5): R75. Published online 2008 September 9. doi: 10.1186/bcr2142
PMCID:
PMC2614508
Abstract Full Text PDF–1.2M Supplementary Material
Tailoring to RB: tumour suppressor status and therapeutic response
Erik S. Knudsen, Karen E. Knudsen
Nat Rev Cancer. Author manuscript; available in PMC 2010 August 4.
Published in final edited form as: Nat Rev Cancer. 2008 September; 8(9): 714–724. doi: 10.1038/nrc2401
PMCID:
PMC2914856
Abstract Full Text PDF–2.2M
DNMT3b overexpression contributes to a hypermethylator phenotype in human breast cancer cell lines
J Devon Roll, Ashley G Rivenbark, Wendell D Jones, William B Coleman
Mol Cancer. 2008; 7: 15. Published online 2008 January 25. doi: 10.1186/1476-4598-7-15
PMCID:
PMC2246151
Abstract Full Text PDF–535K
An Expression Signature Of Estrogen-Regulated Genes Predicts Disease-Free Survival In Tamoxifen-Treated Patients Better Than Progesterone Receptor Status
Marc E. Lippman, James M. Rae, Arul M. Chinnaiyan
Trans Am Clin Climatol Assoc. 2008; 119: 77–92.
PMCID:
PMC2442700
Abstract Full Text PDF–1.2M
Evaluation and validation of candidate endogenous control genes for real-time quantitative PCR studies of breast cancer
Roisin E McNeill, Nicola Miller, Michael J Kerin
BMC Mol Biol. 2007; 8: 107. Published online 2007 November 27. doi: 10.1186/1471-2199-8-107
PMCID:
PMC2211316
Abstract Full Text PDF–653K
Prostate-Derived Ets Transcription Factor Overexpression is Associated with Nodal Metastasis and Hormone Receptor Positivity in Invasive Breast Cancer
Simon Turcotte, Marie-Andrée Forget, Diane Beauseigle, Edgar Nassif, Réjean Lapointe
Neoplasia. 2007 October; 9(10): 788–796.
PMCID:
PMC2040205
Abstract Full Text PDF–325K
EGFR associated expression profiles vary with breast tumor subtype
Katherine A Hoadley, Victor J Weigman, Cheng Fan, Lynda R Sawyer, Xiaping He, Melissa A Troester, Carolyn I Sartor, Thais Rieger-House, Philip S Bernard, Lisa A Carey, Charles M Perou
BMC Genomics. 2007; 8: 258. Published online 2007 July 31. doi: 10.1186/1471-2164-8-258
PMCID:
PMC2014778
Abstract Full Text PDF–1.3M Supplementary Material
Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors
Jason I Herschkowitz, Karl Simin, Victor J Weigman, Igor Mikaelian, Jerry Usary, Zhiyuan Hu, Karen E Rasmussen, Laundette P Jones, Shahin Assefnia, Subhashini Chandrasekharan, Michael G Backlund, Yuzhi Yin, Andrey I Khramtsov, Roy Bastein, John Quackenbush, Robert I Glazer, Powel H Brown, Jeffrey E Green, Levy Kopelovich, Priscilla A Furth, Juan P Palazzo, Olufunmilayo I Olopade, Philip S Bernard, Gary A Churchill, Terry Van Dyke, Charles M Perou
Genome Biol. 2007; 8(5): R76. Published online 2007 May 10. doi: 10.1186/gb-2007-8-5-r76
PMCID:
PMC1929138
Abstract Full Text PDF–3.0M Supplementary Material
The macrophage-stimulating protein pathway promotes metastasis in a mouse model for breast cancer and predicts poor prognosis in humans
Alana L. Welm, Julie B. Sneddon, Carmen Taylor, Dimitry S. A. Nuyten, Marc J. van de Vijver, Bruce H. Hasegawa, J. Michael Bishop
Proc Natl Acad Sci U S A. 2007 May 1; 104(18): 7570–7575. Published online 2007 April 24. doi: 10.1073/pnas.0702095104
PMCID:
PMC1855278
Abstract Full Text PDF–615K Supplementary Material
A new molecular breast cancer subclass defined from a large scale real-time quantitative RT-PCR study
Maïa Chanrion, Hélène Fontaine, Carmen Rodriguez, Vincent Negre, Frédéric Bibeau, Charles Theillet, Alain Hénaut, Jean-Marie Darbon
BMC Cancer. 2007; 7: 39. Published online 2007 March 5. doi: 10.1186/1471-2407-7-39
PMCID:
PMC1828062
Abstract Full Text PDF–1.0M Supplementary Material
Genomic signatures of breast cancer metastasis
V. Urquidi, S. Goodison
Cytogenet Genome Res. Author manuscript; available in PMC 2008 September 21.
Published in final edited form as: Cytogenet Genome Res. 2007; 118(2-4): 116–129. doi: 10.1159/000108292
PMCID:
PMC2546496
Abstract Full Text PDF–99K
A Gene Expression Signature Predicts Survival of Patients with Stage I Non-Small Cell Lung Cancer
Yan Lu, William Lemon, Peng-Yuan Liu, Yijun Yi, Carl Morrison, Ping Yang, Zhifu Sun, Janos Szoke, William L Gerald, Mark Watson, Ramaswamy Govindan, Ming You
PLoS Med. 2006 December; 3(12): e467. Published online 2006 December 26. doi: 10.1371/journal.pmed.0030467
PMCID:
PMC1716187
Abstract Full Text PDF–2.1M Supplementary Material
You are here: NCBI > Literature > PubMed Central (PMC)
Write to the Help Desk