My NCBISign In
Towards understanding the first genome sequence of a crenarchaeon by genome annotation using clusters of orthologous groups of proteins (COGs)
Darren A Natale, Uma T Shankavaram, Michael Y Galperin, Yuri I Wolf, L Aravind, Eugene V Koonin
Genome Biol. 2000; 1(5): research0009.1–research0009.19. Published online 2000 November 6.
PMCID:
PMC15027
Abstract Full Text PDF–168K Supplementary Material

Is Cited by the Following 8 Articles in this Archive:

Insertion sequence content reflects genome plasticity in strains of the root nodule actinobacterium Frankia
Derek M Bickhart, Johann P Gogarten, Pascal Lapierre, Louis S Tisa, Philippe Normand, David R Benson
BMC Genomics. 2009; 10: 468. Published online 2009 October 12. doi: 10.1186/1471-2164-10-468
PMCID:
PMC2770080
Abstract Full Text PDF–1.7M Supplementary Material
Evolutionary Genomics of Lactic Acid Bacteria
Kira S. Makarova, Eugene V. Koonin
J Bacteriol. 2007 February; 189(4): 1199–1208. Published online 2006 November 3. doi: 10.1128/JB.01351-06
PMCID:
PMC1797341
Full Text PDF–1.3M
A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes
Eugene V Koonin, Natalie D Fedorova, John D Jackson, Aviva R Jacobs, Dmitri M Krylov, Kira S Makarova, Raja Mazumder, Sergei L Mekhedov, Anastasia N Nikolskaya, B Sridhar Rao, Igor B Rogozin, Sergei Smirnov, Alexander V Sorokin, Alexander V Sverdlov, Sona Vasudevan, Yuri I Wolf, Jodie J Yin, Darren A Natale
Genome Biol. 2004; 5(2): R7. Published online 2004 January 15.
PMCID:
PMC395751
Abstract Full Text PDF–523K
The COG database: an updated version includes eukaryotes
Roman L Tatusov, Natalie D Fedorova, John D Jackson, Aviva R Jacobs, Boris Kiryutin, Eugene V Koonin, Dmitri M Krylov, Raja Mazumder, Sergei L Mekhedov, Anastasia N Nikolskaya, B Sridhar Rao, Sergei Smirnov, Alexander V Sverdlov, Sona Vasudevan, Yuri I Wolf, Jodie J Yin, Darren A Natale
BMC Bioinformatics. 2003; 4: 41. Published online 2003 September 11. doi: 10.1186/1471-2105-4-41
PMCID:
PMC222959
Abstract Full Text PDF–443K
OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes
Li Li, Christian J. Stoeckert, Jr., David S. Roos
Genome Res. 2003 September; 13(9): 2178–2189. doi: 10.1101/gr.1224503
PMCID:
PMC403725
Abstract Full Text PDF–557K
Comparative genomics of archaea: how much have we learned in six years, and what's next?
Kira S Makarova, Eugene V Koonin
Genome Biol. 2003; 4(8): 115. Published online 2003 July 16.
PMCID:
PMC193635
Abstract Full Text PDF–186K Supplementary Material
Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale
Odile Lecompte, Raymond Ripp, Jean-Claude Thierry, Dino Moras, Olivier Poch
Nucleic Acids Res. 2002 December 15; 30(24): 5382–5390.
PMCID:
PMC140077
Abstract Full Text PDF–281K Supplementary Material
The past, present and future of genome-wide re-annotation
Christos A Ouzounis, Peter D Karp
Genome Biol. 2002; 3(2): comment2001.1–comment2001.6. Published online 2002 January 31.
PMCID:
PMC139008
Abstract Full Text PDF–175K
You are here: NCBI > Literature > PubMed Central (PMC)
Write to the Help Desk