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Genetics. Jan 1999; 151(1): 321–330.
PMCID: PMC1460451

A consensus map for loblolly pine (Pinus taeda L.). I. Construction and integration of individual linkage maps from two outbred three-generation pedigrees.

Abstract

A consensus map for loblolly pine (Pinus taeda L.) was constructed from the integration of linkage data from two unrelated three-generation outbred pedigrees. The progeny segregation data from restriction fragment length polymorphism, random amplified polymorphic DNA, and isozyme genetic markers from each pedigree were recoded to reflect the two independent populations of parental meioses, and genetic maps were constructed to represent each parent. The rate of meiotic recombination was significantly greater for males than females, as was the average estimate of genome length for males (1983.7 cM [Kosambi mapping function (K)]) and females [1339.5 cM(K)]. The integration of individual maps allows for the synthesis of genetic information from independent sources onto a single consensus map and facilitates the consolidation of linkage groups to represent the chromosomes n = 12 of loblolly pine. The resulting consensus map consists of 357 unique molecular markers and covers approximately 1300 cM(K).

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Selected References

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  • Bennetzen JL, Freeling M. Grasses as a single genetic system: genome composition, collinearity and compatibility. Trends Genet. 1993 Aug;9(8):259–261. [PubMed]
  • Kinlaw CS, Gerttula SM, Carter MC. Lipid transfer protein genes of loblolly pine are members of a complex gene family. Plant Mol Biol. 1994 Nov;26(4):1213–1216. [PubMed]
  • Kvarnheden A, Tandre K, Engström P. A cdc2 homologue and closely related processed retropseudogenes from Norway spruce. Plant Mol Biol. 1995 Jan;27(2):391–403. [PubMed]
  • Devey ME, Delfino-Mix A, Kinloch BB, Jr, Neale DB. Random amplified polymorphic DNA markers tightly linked to a gene for resistance to white pine blister rust in sugar pine. Proc Natl Acad Sci U S A. 1995 Mar 14;92(6):2066–2070. [PMC free article] [PubMed]
  • Liu YG, Mitsukawa N, Lister C, Dean C, Whittier RF. Isolation and mapping of a new set of 129 RFLP markers in Arabidopsis thaliana using recombinant inbred lines. Plant J. 1996 Oct;10(4):733–736. [PubMed]
  • Manly KF. A Macintosh program for storage and analysis of experimental genetic mapping data. Mamm Genome. 1993;4(6):303–313. [PubMed]
  • O'malley DM, Porter S, Sederoff RR. Purification, Characterization, and Cloning of Cinnamyl Alcohol Dehydrogenase in Loblolly Pine (Pinus taeda L.). Plant Physiol. 1992 Apr;98(4):1364–1371. [PMC free article] [PubMed]
  • Groover A, Devey M, Fiddler T, Lee J, Megraw R, Mitchel-Olds T, Sherman B, Vujcic S, Williams C, Neale D. Identification of quantitative trait loci influencing wood specific gravity in an outbred pedigree of loblolly pine. Genetics. 1994 Dec;138(4):1293–1300. [PMC free article] [PubMed]
  • Perry DJ, Furnier GR. Pinus banksiana has at least seven expressed alcohol dehydrogenase genes in two linked groups. Proc Natl Acad Sci U S A. 1996 Nov 12;93(23):13020–13023. [PMC free article] [PubMed]
  • Pichersky E. Nomad DNA--a model for movement and duplication of DNA sequences in plant genomes. Plant Mol Biol. 1990 Sep;15(3):437–448. [PubMed]
  • Qi X, Stam P, Lindhout P. Comparison and integration of four barley genetic maps. Genome. 1996 Apr;39(2):379–394. [PubMed]
  • Helentjaris T, Weber D, Wright S. Identification of the genomic locations of duplicate nucleotide sequences in maize by analysis of restriction fragment length polymorphisms. Genetics. 1988 Feb;118(2):353–363. [PMC free article] [PubMed]
  • Hulbert SH, Ilott TW, Legg EJ, Lincoln SE, Lander ES, Michelmore RW. Genetic analysis of the fungus, Bremia lactucae, using restriction fragment length polymorphisms. Genetics. 1988 Dec;120(4):947–958. [PMC free article] [PubMed]
  • Tanksley SD, Ganal MW, Prince JP, de Vicente MC, Bonierbale MW, Broun P, Fulton TM, Giovannoni JJ, Grandillo S, Martin GB, et al. High density molecular linkage maps of the tomato and potato genomes. Genetics. 1992 Dec;132(4):1141–1160. [PMC free article] [PubMed]
  • Tulsieram LK, Glaubitz JC, Kiss G, Carlson JE. Single tree genetic linkage mapping in conifers using haploid DNA from megagametophytes. Biotechnology (N Y) 1992 Jun;10(6):686–690. [PubMed]
  • Kamm A, Doudrick RL, Heslop-Harrison JS, Schmidt T. The genomic and physical organization of Ty1-copia-like sequences as a component of large genomes in Pinus elliottii var. elliottii and other gymnosperms. Proc Natl Acad Sci U S A. 1996 Apr 2;93(7):2708–2713. [PMC free article] [PubMed]

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