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Profiles of Global Gene Expression in Ionizing-Radiation–Damaged Human Diploid Fibroblasts Reveal Synchronization behind the G1 Checkpoint in a G0-like State of Quiescence
Tong Zhou, Jeff W. Chou, Dennis A. Simpson, Yingchun Zhou, Thomas E. Mullen, Margarida Medeiros, Pierre R. Bushel, Richard S. Paules, Xuebin Yang, Patrick Hurban, Edward K. Lobenhofer, and William K. Kaufmann
Environ Health Perspect. 2006 April; 114(4): 553–559. Published online 2005 December 19. doi: 10.1289/ehp.8026.
PMCID: PMC1440780
 Is Cited by the Following Articles in this Archive:
Discernment of possible mechanisms of hepatotoxicity via biological processes over-represented by co-expressed genes
Jeff W Chou and Pierre R Bushel
BMC Genomics. 2009; 10: 272. Published online 2009 June 18. doi: 10.1186/1471-2164-10-272.
PMCID: PMC2706894
A signature-based method for indexing cell cycle phase distribution from microarray profiles
Hideaki Mizuno, Yoshito Nakanishi, Nobuya Ishii, Akinori Sarai, and Kunio Kitada
BMC Genomics. 2009; 10: 137. Published online 2009 March 30. doi: 10.1186/1471-2164-10-137.
PMCID: PMC2676301
Role of the mismatch repair gene, Msh6, in suppressing genome instability and radiation-induced mutations
Julio Barrera-Oro, Tzu-Yang Liu, Erin Gorden, Raju Kucherlapati, Changshun Shao, and Jay A Tischfield
Mutat Res. Author manuscript; available in PMC 2009 July 3.
PMCID: PMC2476210
Published in final edited form as: Mutat Res. 2008 July 3; 642(1-2): 74–79. Published online 2008 April 30. doi: 10.1016/j.mrfmmm.2008.04.006.
Manuscript: | Abstract | Full Text | PDF–82K |
Blood gene expression signatures predict exposure levels
P. R. Bushel, A. N. Heinloth, J. Li, L. Huang, J. W. Chou, G. A. Boorman, D. E. Malarkey, C. D. Houle, S. M. Ward, R. E. Wilson, R. D. Fannin, M. W. Russo, P. B. Watkins, R. W. Tennant, and R. S. Paules
Proc Natl Acad Sci U S A. 2007 November 13; 104(46): 18211–18216. Published online 2007 November 2. doi: 10.1073/pnas.0706987104.
PMCID: PMC2084322
Extracting gene expression patterns and identifying co-expressed genes from microarray data reveals biologically responsive processes
Jeff W Chou, Tong Zhou, William K Kaufmann, Richard S Paules, and Pierre R Bushel
BMC Bioinformatics. 2007; 8: 427. Published online 2007 November 2. doi: 10.1186/1471-2105-8-427.
PMCID: PMC2194742
Inhibition of Integrin αvβ6, an Activator of Latent Transforming Growth Factor-β, Prevents Radiation-induced Lung Fibrosis
Khalid Puthawala, Nicos Hadjiangelis, Steven C. Jacoby, Emmanuel Bayongan, Zhicheng Zhao, Zhiwei Yang, Mary Louise Devitt, Gerald S. Horan, Paul H. Weinreb, Matvey E. Lukashev, Shelia M. Violette, Kristen S. Grant, Cristina Colarossi, Silvia C. Formenti, and John S. Munger
Am J Respir Crit Care Med. 2008 January 1; 177(1): 82–90. Published online 2007 October 4. doi: 10.1164/rccm.200706-806OC.
PMCID: PMC2176115
E2F4 Function in G2: Maintaining G2-Arrest to Prevent Mitotic Entry with Damaged DNA
Dragos Plesca, Meredith E. Crosby, Damodar Gupta, and Alexandru Almasan
Cell Cycle. Author manuscript; available in PMC 2008 December 4.
PMCID: PMC2596058
Published in final edited form as: Cell Cycle. 2007 May 15; 6(10): 1147–1152. Published online 2007 May 11.
Manuscript: | Abstract | Full Text | PDF–603K |
Identification of Primary Transcriptional Regulation of Cell Cycle-Regulated Genes upon DNA Damage
Tong Zhou, Jeff Chou, Thomas E. Mullen, Rani Elkon, Yingchun Zhou, Dennis A. Simpson, Pierre R. Bushel, Richard S. Paules, Edward K. Lobenhofer, Patrick Hurban, and William K. Kaufmann
Cell Cycle. Author manuscript; available in PMC 2007 December 6.
PMCID: PMC2117899
Published in final edited form as: Cell Cycle. 2007 April 15; 6(8): 972–981. Published online 2007 April 19.
Identification of Genes Implicated in Methapyrilene-Induced Hepatotoxicity by Comparing Differential Gene Expression in Target and Nontarget Tissue
J. Todd Auman, Jeff Chou, Kevin Gerrish, Qihong Huang, Supriya Jayadev, Kerry Blanchard, and Richard S. Paules
Environ Health Perspect. 2007 April; 115(4): 572–578. Published online 2007 January 17. doi: 10.1289/ehp.9396.
PMCID: PMC1852695
p53-Dependent but ATM-Independent Inhibition of DNA Synthesis and G2 Arrest in Cadmium-Treated Human Fibroblasts
Feng Cao, Tong Zhou, Dennis Simpson, Yingchun Zhou, Jayne Boyer, Bo Chen, Taiyi Jin, Marila Cordeiro-Stone, and William Kaufmann
Toxicol Appl Pharmacol. Author manuscript; available in PMC 2008 January 15.
PMCID: PMC1864945
Published in final edited form as: Toxicol Appl Pharmacol. 2007 January 15; 218(2): 174–185. Published online 2006 November 11. doi: 10.1016/j.taap.2006.10.031.
Manuscript: | Abstract | Full Text | PDF–889K |