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Identifying repeat domains in large genomes
Degui Zhi, Benjamin J Raphael, Alkes L Price, Haixu Tang, Pavel A Pevzner
Genome Biol. 2006; 7(1): R7. Published online 2006 January 31. doi: 10.1186/gb-2006-7-1-r7
PMCID:
PMC1431705
Abstract Full Text PDF–555K Supplementary Material

Is Cited by the Following 7 Articles in this Archive:

Assembly Algorithms for Next-Generation Sequencing Data
Jason R. Miller, Sergey Koren, Granger Sutton
Genomics. Author manuscript; available in PMC 2011 June 1.
Published in final edited form as: Genomics. 2010 June; 95(6): 315–327. Published online 2010 March 6. doi: 10.1016/j.ygeno.2010.03.001
PMCID:
PMC2874646
Abstract Full Text PDF–367K
UCbase & miRfunc: a database of ultraconserved sequences and microRNA function
Cristian Taccioli, Enrica Fabbri, Rosa Visone, Stefano Volinia, George A. Calin, Louise Y. Fong, Roberto Gambari, Arianna Bottoni, Mario Acunzo, John Hagan, Marilena V. Iorio, Claudia Piovan, Giulia Romano, Carlo Maria Croce
Nucleic Acids Res. 2009 January; 37(Database issue): D41–D48. Published online 2009 January. doi: 10.1093/nar/gkn702
PMCID:
PMC2686429
Abstract Full Text PDF–8.9M
Simple tools for assembling and searching high-density picolitre pyrophosphate sequence data
Nicolas J Parker, Andrew G Parker
Source Code Biol Med. 2008; 3: 5. Published online 2008 April 18. doi: 10.1186/1751-0473-3-5
PMCID:
PMC2374781
Abstract Full Text PDF–359K Supplementary Material
Empirical comparison of ab initio repeat finding programs
Surya Saha, Susan Bridges, Zenaida V. Magbanua, Daniel G. Peterson
Nucleic Acids Res. 2008 April; 36(7): 2284–2294. Published online 2008 April. doi: 10.1093/nar/gkn064
PMCID:
PMC2367713
Abstract Full Text PDF–146K
Short read fragment assembly of bacterial genomes
Mark J. Chaisson, Pavel A. Pevzner
Genome Res. 2008 February; 18(2): 324–330. doi: 10.1101/gr.7088808
PMCID:
PMC2203630
Abstract Full Text PDF–212K
Novel porcine repetitive elements
Ralph T Wiedmann, Dan J Nonneman, John W Keele
BMC Genomics. 2006; 7: 304. Published online 2006 December 1. doi: 10.1186/1471-2164-7-304
PMCID:
PMC1713245
Abstract Full Text PDF–339K Supplementary Material
AliWABA: alignment on the web through an A-Bruijn approach
Neil C. Jones, Degui Zhi, Benjamin J. Raphael
Nucleic Acids Res. 2006 July 1; 34(Web Server issue): W613–W616. Published online 2006 July 14. doi: 10.1093/nar/gkl288
PMCID:
PMC1538870
Abstract Full Text PDF–111K
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