John S Reece-Hoyes, Bart Deplancke, Jane Shingles, Christian A Grove, Ian A Hope, Albertha JM Walhout
Genome Biol. 2005; 6(13): R110. Published online 2005 December 30. doi: 10.1186/gb-2005-6-13-r110
- PMCID:
- PMC1414109
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John S Reece-Hoyes, Bart Deplancke, Jane Shingles, Christian A Grove, Ian A Hope, Albertha JM Walhout Genome Biol. 2005; 6(13): R110. Published online 2005 December 30. doi: 10.1186/gb-2005-6-13-r110
Chunwang Dang, Yong Wang, Debao Zhang, Qin Yao, Keping Chen PLoS One. 2011; 6(11): e26878. Published online 2011 November 9. doi: 10.1371/journal.pone.0026878
Carine Gubelmann, Alexandre Gattiker, Andreas Massouras, Korneel Hens, Fabrice David, Frederik Decouttere, Jacques Rougemont, Bart Deplancke Database (Oxford) 2011; 2011: bar040. Published online 2011 September 14. doi: 10.1093/database/bar040
Ludivine Walter, Aiswarya Baruah, Hsin-Wen Chang, Heather Mae Pace, Siu Sylvia Lee PLoS Biol. 2011 June; 9(6): e1001084. Published online 2011 June 21. doi: 10.1371/journal.pbio.1001084
Daniel D. Shaye, Iva Greenwald PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085
Federico De Masi, Christian A. Grove, Anastasia Vedenko, Andreu Alibés, Stephen S. Gisselbrecht, Luis Serrano, Martha L. Bulyk, Albertha J. M. Walhout Nucleic Acids Res. 2011 June; 39(11): 4553–4563. Published online 2011 February 18. doi: 10.1093/nar/gkr070
Wei Niu, Zhi John Lu, Mei Zhong, Mihail Sarov, John I. Murray, Cathleen M. Brdlik, Judith Janette, Chao Chen, Pedro Alves, Elicia Preston, Cindie Slightham, Lixia Jiang, Anthony A. Hyman, Stuart K. Kim, Robert H. Waterston, Mark Gerstein, Michael Snyder, Valerie Reinke Genome Res. 2011 February; 21(2): 245–254. doi: 10.1101/gr.114587.110
Natalia Naumova, Job Dekker J Cell Sci. 2010 June 15; 123(12): 1979–1988. Published online 2010 June 2. doi: 10.1242/jcs.051631
H Efsun Arda, Stefan Taubert, Lesley T MacNeil, Colin C Conine, Ben Tsuda, Marc Van Gilst, Reynaldo Sequerra, Lynn Doucette-Stamm, Keith R Yamamoto, Albertha J M Walhout Mol Syst Biol. 2010; 6: 367. Published online 2010 May 11. doi: 10.1038/msb.2010.23
Cole M. Haynes, Yun Yang, Steven P. Blais, Thomas A. Neubert, David Ron Mol Cell. Author manuscript; available in PMC 2011 February 26. Published in final edited form as: Mol Cell. 2010 February 26; 37(4): 529–540. doi: 10.1016/j.molcel.2010.01.015
Kathleen A. Estes, Tiffany L. Dunbar, Jennifer R. Powell, Frederick M. Ausubel, Emily R. Troemel Proc Natl Acad Sci U S A. 2010 February 2; 107(5): 2153–2158. Published online 2010 January 21. doi: 10.1073/pnas.0914643107
H. Efsun Arda, Albertha J.M. Walhout Brief Funct Genomics. 2010 January; 9(1): 4–12. Published online 2009 December 11. doi: 10.1093/bfgp/elp049
Itai Yanai, Craig P. Hunter Genome Res. 2009 December; 19(12): 2214–2220. doi: 10.1101/gr.093815.109
Keiichi Mochida, Takuhiro Yoshida, Tetsuya Sakurai, Kazuko Yamaguchi-Shinozaki, Kazuo Shinozaki, Lam-Son Phan Tran DNA Res. 2009 December; 16(6): 353–369. Published online 2009 November 2. doi: 10.1093/dnares/dsp023
Fuhui Long, Hanchuan Peng, Xiao Liu, Stuart K. Kim, Eugene Myers Nat Methods. Author manuscript; available in PMC 2010 June 8. Published in final edited form as: Nat Methods. 2009 September; 6(9): 667–672. Published online 2009 August 16. doi: 10.1038/nmeth.1366
Tobias Warnecke, Guang-Zhong Wang, Martin J Lercher, Laurence D Hurst BMC Evol Biol. 2009; 9: 193. Published online 2009 August 7. doi: 10.1186/1471-2148-9-193
A Multi-Parameter Network Reveals Extensive Divergence Between C. elegans bHLH Transcription Factors Christian A. Grove, Federico de Masi, M. Inmaculada Barrasa, Daniel E. Newburger, Mark J. Alkema, Martha L. Bulyk, Albertha J.M. Walhout Cell. Author manuscript; available in PMC 2010 July 23. Published in final edited form as: Cell. 2009 July 23; 138(2): 314–327. doi: 10.1016/j.cell.2009.04.058
Richard Jovelin Mol Biol Evol. 2009 October; 26(10): 2373–2386. Published online 2009 July 9. doi: 10.1093/molbev/msp142
Susan E. Celniker, Laura A. L. Dillon, Mark B. Gerstein, Kristin C. Gunsalus, Steven Henikoff, Gary H. Karpen, Manolis Kellis, Eric C. Lai, Jason D. Lieb, David M. MacAlpine, Gos Micklem, Fabio Piano, Michael Snyder, Lincoln Stein, Kevin P. White, Robert H. Waterston Nature. Author manuscript; available in PMC 2010 March 22. Published in final edited form as: Nature. 2009 June 18; 459(7249): 927–930. doi: 10.1038/459927a
Natalia J. Martinez, Albertha J. M. Walhout Bioessays. Author manuscript; available in PMC 2011 June 20. Published in final edited form as: Bioessays. 2009 April; 31(4): 435–445. doi: 10.1002/bies.200800212
Debra L Fulton, Saravanan Sundararajan, Gwenael Badis, Timothy R Hughes, Wyeth W Wasserman, Jared C Roach, Rob Sladek Genome Biol. 2009; 10(3): R29. Published online 2009 March 12. doi: 10.1186/gb-2009-10-3-r29
Michael F. Berger, Martha L. Bulyk Nat Protoc. Author manuscript; available in PMC 2010 July 22. Published in final edited form as: Nat Protoc. 2009; 4(3): 393–411. doi: 10.1038/nprot.2008.195
Natalia J. Martinez, Maria C. Ow, M. Inmaculada Barrasa, Molly Hammell, Reynaldo Sequerra, Lynn Doucette-Stamm, Frederick P. Roth, Victor R. Ambros, Albertha J.M. Walhout Genes Dev. 2008 September 15; 22(18): 2535–2549. doi: 10.1101/gad.1678608
Maria C. Ow, Natalia J. Martinez, Philip H. Olsen, Howard S. Silverman, M. Inmaculada Barrasa, Barbara Conradt, Albertha J.M. Walhout, Victor Ambros Genes Dev. 2008 September 15; 22(18): 2520–2534. doi: 10.1101/gad.1678808
Wilfried Haerty, Carlo Artieri, Navid Khezri, Rama S Singh, Bhagwati P Gupta BMC Genomics. 2008; 9: 399. Published online 2008 August 27. doi: 10.1186/1471-2164-9-399
Nathalie Pujol, Olivier Zugasti, Daniel Wong, Carole Couillault, C. Léopold Kurz, Hinrich Schulenburg, Jonathan J. Ewbank PLoS Pathog. 2008 July; 4(7): e1000105. Published online 2008 July 18. doi: 10.1371/journal.ppat.1000105
Christian A. Grove, Albertha J. M. Walhout Mol Biosyst. Author manuscript; available in PMC 2009 April 27. Published in final edited form as: Mol Biosyst. 2008 April; 4(4): 309–314. Published online 2008 February 21. doi: 10.1039/b715909a
Stein Aerts, Maximilian Haeussler, Steven van Vooren, Obi L Griffith, Paco Hulpiau, Steven JM Jones, Stephen B Montgomery, Casey M Bergman, The Open Regulatory Annotation Consortium Genome Biol. 2008; 9(2): R31. Published online 2008 February 13. doi: 10.1186/gb-2008-9-2-r31
Vanessa Vermeirssen, M. Inmaculada Barrasa, César A. Hidalgo, Jenny Aurielle B. Babon, Reynaldo Sequerra, Lynn Doucette-Stamm, Albert-László Barabási, Albertha J.M. Walhout Genome Res. 2007 July; 17(7): 1061–1071. doi: 10.1101/gr.6148107
Sandra Richardt, Daniel Lang, Ralf Reski, Wolfgang Frank, Stefan A. Rensing Plant Physiol. 2007 April; 143(4): 1452–1466. doi: 10.1104/pp.107.095760
Guoyan Zhao, Lawrence A. Schriefer, Gary D. Stormo Genome Res. 2007 March; 17(3): 348–357. doi: 10.1101/gr.5989907
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