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Orthologs and paralogs - we need to get it right
Roy A Jensen
Genome Biol. 2001; 2(8): interactions1002.1–interactions1002.3. Published online 2001 August 3.
PMCID:
PMC138949
Abstract Full Text PDF–74K

Is Cited by the Following 7 Articles in this Archive:

Revealing Mammalian Evolutionary Relationships by Comparative Analysis of Gene Clusters
Giltae Song, Cathy Riemer, Benjamin Dickins, Hie Lim Kim, Louxin Zhang, Yu Zhang, Chih-Hao Hsu, Ross C. Hardison, NISC Comparative Sequencing Program, Eric D. Green, Webb Miller
Genome Biol Evol. 2012; 4(4): 586–601. Published online 2012 March 27. doi: 10.1093/gbe/evs032
PMCID:
PMC3342878
Abstract Full Text PDF–1021K
Novel Analysis of Oceanic Surface Water Metagenomes Suggests Importance of Polyphosphate Metabolism in Oligotrophic Environments
Ben Temperton, Jack A. Gilbert, John P. Quinn, John W. McGrath
PLoS One. 2011; 6(1): e16499. Published online 2011 January 28. doi: 10.1371/journal.pone.0016499
PMCID:
PMC3030594
Abstract Full Text PDF–1.9M Supplementary Material
Cohesion Group Approach for Evolutionary Analysis of Aspartokinase, an Enzyme That Feeds a Branched Network of Many Biochemical Pathways
Chien-Chi Lo, Carol A. Bonner, Gary Xie, Mark D'Souza, Roy A. Jensen
Microbiol Mol Biol Rev. 2009 December; 73(4): 594–651. doi: 10.1128/MMBR.00024-09
PMCID:
PMC2786584
Abstract Full Text PDF–12M
Phylogenetic and Functional Assessment of Orthologs Inference Projects and Methods
Adrian M. Altenhoff, Christophe Dessimoz
PLoS Comput Biol. 2009 January; 5(1): e1000262. Published online 2009 January 16. doi: 10.1371/journal.pcbi.1000262
PMCID:
PMC2612752
Abstract Full Text PDF–461K Supplementary Material
PHOG: a database of supergenomes built from proteome complements
Igor V Merkeev, Pavel S Novichkov, Andrey A Mironov
BMC Evol Biol. 2006; 6: 52. Published online 2006 June 22. doi: 10.1186/1471-2148-6-52
PMCID:
PMC1523204
Abstract Full Text PDF–294K
Data preparation and interannotator agreement: BioCreAtIvE Task 1B
Marc E Colosimo, Alexander A Morgan, Alexander S Yeh, Jeffrey B Colombe, Lynette Hirschman
BMC Bioinformatics. 2005; 6(Suppl 1): S12. Published online 2005 May 24. doi: 10.1186/1471-2105-6-S1-S12
PMCID:
PMC1869005
Abstract Full Text PDF–261K Supplementary Material
Functionality of System Components: Conservation of Protein Function in Protein Feature Space
Lars Juhl Jensen, David W. Ussery, Søren Brunak
Genome Res. 2003 November; 13(11): 2444–2449. doi: 10.1101/gr.1190803
PMCID:
PMC403763
Abstract Full Text PDF–400K
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