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Phylogenetic analysis of the human basic helix-loop-helix proteins
Valérie Ledent, Odier Paquet, Michel Vervoort
Genome Biol. 2002; 3(6): research0030.1–research0030.18. Published online 2002 May 30.
PMCID:
PMC116727
Abstract Full Text PDF–226K Supplementary Material
 Is Cited by the Following 22 Articles in this Archive:
Diversification and Molecular Evolution of ATOH8, a Gene Encoding a bHLH Transcription Factor
Jingchen Chen, Fangping Dai, Ajeesh Balakrishnan-Renuka, Florian Leese, Werner Schempp, Felix Schaller, Michael M. Hoffmann, Gabriela Morosan-Puopolo, Faisal Yusuf, Izak Johannes Bisschoff, Verena Chankiewitz, Jinglun Xue, Jingzhong Chen, Kang Ying, Beate Brand-Saberi
PLoS One. 2011; 6(8): e23005. Published online 2011 August 4. doi: 10.1371/journal.pone.0023005
PMCID:
PMC3150394
Abstract Full Text PDF–1.2M Supplementary Material
Notch-dependent induction of left/right asymmetry in C. elegans interneurons and motoneurons
Vincent Bertrand, Paul Bisso, Richard J. Poole, Oliver Hobert
Curr Biol. Author manuscript; available in PMC 2012 January 26.
Published in final edited form as: Curr Biol. 2011 July 26; 21(14): 1225–1231. Published online 2011 July 7. doi: 10.1016/j.cub.2011.06.016
PMCID:
PMC3233726
Abstract Full Text PDF–2.0M Supplementary Material
NeuroD Factors Regulate Cell Fate and Neurite Stratification in the Developing Retina
Timothy J. Cherry, Sui Wang, Ingo Bormuth, Markus Schwab, James Olson, Constance L. Cepko
J Neurosci. Author manuscript; available in PMC 2011 November 18.
Published in final edited form as: J Neurosci. 2011 May 18; 31(20): 7365–7379. doi: 10.1523/JNEUROSCI.2555-10.2011
PMCID:
PMC3135085
Abstract Full Text PDF–5.1M Supplementary Material
Global MYCN Transcription Factor Binding Analysis in Neuroblastoma Reveals Association with Distinct E-Box Motifs and Regions of DNA Hypermethylation
Derek M. Murphy, Patrick G. Buckley, Kenneth Bryan, Sudipto Das, Leah Alcock, Niamh H. Foley, Suzanne Prenter, Isabella Bray, Karen M. Watters, Desmond Higgins, Raymond L. Stallings
PLoS One. 2009; 4(12): e8154. Published online 2009 December 4. doi: 10.1371/journal.pone.0008154
PMCID:
PMC2781550
Abstract Full Text PDF–500K Supplementary Material
Origin and Diversification of Basic-Helix-Loop-Helix Proteins in Plants
Nuno Pires, Liam Dolan
Mol Biol Evol. 2010 April; 27(4): 862–874. Published online 2009 November 25. doi: 10.1093/molbev/msp288
PMCID:
PMC2839125
Abstract Full Text PDF–766K Supplementary Material
Experimental determination of the evolvability of a transcription factor
Sebastian J. Maerkl, Stephen R. Quake
Proc Natl Acad Sci U S A. 2009 November 3; 106(44): 18650–18655. Published online 2009 October 19. doi: 10.1073/pnas.0907688106
PMCID:
PMC2765923
Abstract Full Text PDF–2.3M Supplementary Material
Functional characterization of PAS and HES family bHLH transcription factors during the metamorphosis of the red flour beetle, Tribolium castaneum
Kavita Bitra, Anjiang Tan, Ashley Dowling, Subba R. Palli
Gene. Author manuscript; available in PMC 2010 December 1.
Published in final edited form as: Gene. 2009 December 1; 448(1): 74–87. Published online 2009 August 13. doi: 10.1016/j.gene.2009.08.003
PMCID:
PMC2760604
Abstract Full Text PDF–786K Supplementary Material
Combined informatic and expression screen identifies the novel DAF-16 target HLH-13
Nicole Liachko, Rachel Davidowitz, Siu Sylvia Lee
Dev Biol. Author manuscript; available in PMC 2010 January 11.
Published in final edited form as: Dev Biol. 2009 March 1; 327(1): 97–105. Published online 2008 December 7. doi: 10.1016/j.ydbio.2008.11.019
PMCID:
PMC2804473
Abstract Full Text PDF–1.4M Supplementary Material
Evolution of the holozoan ribosome biogenesis regulon
Seth J Brown, Michael D Cole, Albert J Erives
BMC Genomics. 2008; 9: 442. Published online 2008 September 24. doi: 10.1186/1471-2164-9-442
PMCID:
PMC2570694
Abstract Full Text PDF–1.0M Supplementary Material
atonal- and achaete-scute-related genes in the annelid Platynereis dumerilii: insights into the evolution of neural basic-Helix-Loop-Helix genes
Elena Simionato, Pierre Kerner, Nicolas Dray, Martine Le Gouar, Valérie Ledent, Detlev Arendt, Michel Vervoort
BMC Evol Biol. 2008; 8: 170. Published online 2008 June 9. doi: 10.1186/1471-2148-8-170
PMCID:
PMC2435551
Abstract Full Text PDF–4.4M
Analysis of four achaete-scute homologs in Bombyx mori reveals new viewpoints of the evolution and functions of this gene family
Qingxiang Zhou, Tianyi Zhang, Weihua Xu, Linlin Yu, Yongzhu Yi, Zhifang Zhang
BMC Genet. 2008; 9: 24. Published online 2008 March 6. doi: 10.1186/1471-2156-9-24
PMCID:
PMC2315653
Abstract Full Text PDF–1.5M
Regulatory module network of basic/helix-loop-helix transcription factors in mouse brain
Jing Li, Zijing J Liu, Yuchun C Pan, Qi Liu, Xing Fu, Nigel GF Cooper, Yixue Li, Mengsheng Qiu, Tieliu Shi
Genome Biol. 2007; 8(11): R244. Published online 2007 November 19. doi: 10.1186/gb-2007-8-11-r244
PMCID:
PMC2258200
Abstract Full Text PDF–1.8M Supplementary Material
An exploration of alternative visualisations of the basic helix-loop-helix protein interaction network
Brian J Holden, John W Pinney, Simon C Lovell, Grigoris D Amoutzias, David L Robertson
BMC Bioinformatics. 2007; 8: 289. Published online 2007 August 6. doi: 10.1186/1471-2105-8-289
PMCID:
PMC1963338
Abstract Full Text PDF–1.5M Supplementary Material
Multiple Basic Helix-Loop-Helix Proteins Regulate Expression of the ENO1 Gene of Saccharomyces cerevisiae
Meng Chen, John M. Lopes
Eukaryot Cell. 2007 May; 6(5): 786–796. Published online 2007 March 9. doi: 10.1128/EC.00383-06
PMCID:
PMC1899243
Abstract Full Text PDF–1.2M
Genome-Wide Analysis of Basic/Helix-Loop-Helix Transcription Factor Family in Rice and Arabidopsis
Xiaoxing Li, Xuepeng Duan, Haixiong Jiang, Yujin Sun, Yuanping Tang, Zheng Yuan, Jingkang Guo, Wanqi Liang, Liang Chen, Jingyuan Yin, Hong Ma, Jian Wang, Dabing Zhang
Plant Physiol. 2006 August; 141(4): 1167–1184. doi: 10.1104/pp.106.080580
PMCID:
PMC1533929
Abstract Full Text PDF–1.1M
A compendium of Caenhorabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks
John S Reece-Hoyes, Bart Deplancke, Jane Shingles, Christian A Grove, Ian A Hope, Albertha JM Walhout
Genome Biol. 2005; 6(13): R110. Published online 2005 December 30. doi: 10.1186/gb-2005-6-13-r110
PMCID:
PMC1414109
Abstract Full Text PDF–550K Supplementary Material
The dosage of the neuroD2 transcription factor regulates amygdala development and emotional learning
Chin-Hsing Lin, Stacey Hansen, Zhenshan Wang, Daniel R. Storm, Stephen J. Tapscott, James M. Olson
Proc Natl Acad Sci U S A. 2005 October 11; 102(41): 14877–14882. Published online 2005 October 3. doi: 10.1073/pnas.0506785102
PMCID:
PMC1239945
Abstract Full Text PDF–606K
Solving the protein sequence metric problem
William R. Atchley, Jieping Zhao, Andrew D. Fernandes, Tanja Drüke
Proc Natl Acad Sci U S A. 2005 May 3; 102(18): 6395–6400. Published online 2005 April 25. doi: 10.1073/pnas.0408677102
PMCID:
PMC1088356
Abstract Full Text PDF–368K Supplementary Material
An overview of the basic helix-loop-helix proteins
Susan Jones
Genome Biol. 2004; 5(6): 226. Published online 2004 May 28. doi: 10.1186/gb-2004-5-6-226
PMCID:
PMC463060
Abstract Full Text PDF–319K
Inhibition of Mist1 Homodimer Formation Induces Pancreatic Acinar-to-Ductal Metaplasia
Liqin Zhu, Thai Tran, J. Michael Rukstalis, Peichuan Sun, Barbara Damsz, Stephen F. Konieczny
Mol Cell Biol. 2004 April; 24(7): 2673–2681. doi: 10.1128/MCB.24.7.2673-2681.2004
PMCID:
PMC371125
Abstract Full Text PDF–1.0M
Convergent evolution of gene networks by single-gene duplications in higher eukaryotes
Gregory D Amoutzias, David L Robertson, Stephen G Oliver, Erich Bornberg-Bauer
EMBO Rep. 2004 March; 5(3): 274–279. Published online 2004 February 13. doi: 10.1038/sj.embor.7400096
PMCID:
PMC1299007
Abstract Full Text PDF–276K Supplementary Material
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