pmc logo image
Gene expression profiles derived from fine needle aspiration correlate with response to systemic chemotherapy in breast cancer
Christos Sotiriou, Trevor J Powles, Mitch Dowsett, Amir A Jazaeri, Andrew L Feldman, Laura Assersohn, Chandramouli Gadisetti, Steven K Libutti, Edison T Liu
Breast Cancer Res. 2002; 4(3): R3. Published online 2002 March 20.
PMCID:
PMC111028
Abstract Full Text PDF–492K
 Is Cited by the Following 27 Articles in this Archive:
Global Array-Based Transcriptomics from Minimal Input RNA Utilising an Optimal RNA Isolation Process Combined with SPIA cDNA Probes
Laura Kennedy, Mahesh Pauriah, Valerie Godfrey, Jacqueline Howie, Helen Dennis, Daniel Crowther, Allan Struthers, Catharine Goddard, Giora Feuerstein, Chim Lang, Gino Miele
PLoS One. 2011; 6(3): e17625. Published online 2011 March 22. doi: 10.1371/journal.pone.0017625
PMCID:
PMC3062544
Abstract Full Text PDF–1002K
Fine Needle Aspiration Biopsies for Gene Expression Ratio-based Diagnostic and Prognostic Tests in Malignant Pleural Mesothelioma
Assunta De Rienzo, Lingsheng Dong, Beow Y. Yeap, Roderick V. Jensen, William G. Richards, Gavin J. Gordon, David J. Sugarbaker, Raphael Bueno
Clin Cancer Res. Author manuscript; available in PMC 2012 January 15.
Published in final edited form as: Clin Cancer Res. 2011 January 15; 17(2): 310–316. Published online 2010 November 18. doi: 10.1158/1078-0432.CCR-10-0806
PMCID:
PMC3058309
Abstract Full Text PDF–246K
Reliable Gene Expression Measurements from Fine Needle Aspirates of Pancreatic Tumors: Effect of Amplicon Length and Quality Assessment
Michelle A. Anderson, Dean E. Brenner, James M. Scheiman, Diane M. Simeone, Nalina Singh, Matthew J. Sikora, Lili Zhao, Amy N. Mertens, James M. Rae
J Mol Diagn. 2010 September; 12(5): 566–575. doi: 10.2353/jmoldx.2010.090107
PMCID:
PMC2928420
Abstract Full Text PDF–347K Supplementary Material
HOXA9 regulates BRCA1 expression to modulate human breast tumor phenotype
Penney M. Gilbert, Janna K. Mouw, Meredith A. Unger, Johnathon N. Lakins, Mawuse K. Gbegnon, Virginia B. Clemmer, Miriam Benezra, Jonathan D. Licht, Nancy J. Boudreau, Kelvin K.C. Tsai, Alana L. Welm, Michael D. Feldman, Barbara L. Weber, Valerie M. Weaver
J Clin Invest. 2010 May 3; 120(5): 1535–1550. Published online 2010 April 12. doi: 10.1172/JCI39534
PMCID:
PMC2860938
Abstract Full Text PDF–4.2M Supplementary Material
Prediction of breast cancer metastasis by genomic profiling: where do we stand?
Ulrich Pfeffer, Francesco Romeo, Douglas M. Noonan, Adriana Albini
Clin Exp Metastasis. 2009 August; 26(6): 547–558. Published online 2009 March 24. doi: 10.1007/s10585-009-9254-y
PMCID:
PMC2717389
Abstract Full Text PDF–595K
The effects of timing of fine needle aspiration biopsies on gene expression profiles in breast cancers
Vietty Wong, Dong-Yu Wang, Keisha Warren, Supriya Kulkarni, Scott Boerner, Susan Jane Done, Wey Liang Leong
BMC Cancer. 2008; 8: 277. Published online 2008 September 30. doi: 10.1186/1471-2407-8-277
PMCID:
PMC2567989
Abstract Full Text PDF–567K Supplementary Material
Expression profiling with RNA from formalin-fixed, paraffin-embedded material
Andrea Oberli, Vlad Popovici, Mauro Delorenzi, Anna Baltzer, Janine Antonov, Sybille Matthey, Stefan Aebi, Hans Jörg Altermatt, Rolf Jaggi
BMC Med Genomics. 2008; 1: 9. Published online 2008 April 19. doi: 10.1186/1755-8794-1-9
PMCID:
PMC2359756
Abstract Full Text PDF–1.1M Supplementary Material
High rates of breast conservation for large ductal and lobular invasive carcinomas combining multimodality strategies
M A Bollet, A Savignoni, J-Y Pierga, M Lae, V Fourchotte, Y M Kirova, R Dendale, F Campana, B Sigal-Zafrani, R Salmon, A Fourquet, A Vincent-Salomon
Br J Cancer. 2008 February 26; 98(4): 734–741. Published online 2008 February 5. doi: 10.1038/sj.bjc.6604229
PMCID:
PMC2259192
Abstract Full Text PDF–138K
A highly sensitive and specific system for large-scale gene expression profiling
Guohong Hu, Qifeng Yang, Xiangfeng Cui, Gang Yue, Marco A Azaro, Hui-Yun Wang, Honghua Li
BMC Genomics. 2008; 9: 9. Published online 2008 January 10. doi: 10.1186/1471-2164-9-9
PMCID:
PMC2267712
Abstract Full Text PDF–589K Supplementary Material
MicroRNA expression profiling of human breast cancer identifies new markers of tumor subtype
Cherie Blenkiron, Leonard D Goldstein, Natalie P Thorne, Inmaculada Spiteri, Suet-Feung Chin, Mark J Dunning, Nuno L Barbosa-Morais, Andrew E Teschendorff, Andrew R Green, Ian O Ellis, Simon Tavaré, Carlos Caldas, Eric A Miska
Genome Biol. 2007; 8(10): R214. Published online 2007 October 8. doi: 10.1186/gb-2007-8-10-r214
PMCID:
PMC2246288
Abstract Full Text PDF–3.3M Supplementary Material
High-throughput genomic technology in research and clinical management of breast cancer. Exploiting the potential of gene expression profiling: is it ready for the clinic?
Andrew H Sims, Kai Ren Ong, Robert B Clarke, Anthony Howell
Breast Cancer Res. 2006; 8(5): 214. Published online 2006 October 11. doi: 10.1186/bcr1605
PMCID:
PMC1779487
Abstract Full Text PDF–544K
Differential diagnosis of solitary lung nodules with gene expression ratios
Gavin J. Gordon, Levi A. Deters, Matthew D. Nitz, Barry C. Lieberman, Beow Y. Yeap, Raphael Bueno
J Thorac Cardiovasc Surg. Author manuscript; available in PMC 2008 January 13.
Published in final edited form as: J Thorac Cardiovasc Surg. 2006 September; 132(3): 621–627. doi: 10.1016/j.jtcvs.2006.03.046
PMCID:
PMC2194803
Abstract Full Text PDF–318K
The effect of the stromal component of breast tumours on prediction of clinical outcome using gene expression microarray analysis
Susan J Cleator, Trevor J Powles, Tim Dexter, Laura Fulford, Alan Mackay, Ian E Smith, Haukur Valgeirsson, Alan Ashworth, Mitch Dowsett
Breast Cancer Res. 2006; 8(3): R32. Published online 2006 June 21. doi: 10.1186/bcr1506
PMCID:
PMC1557729
Abstract Full Text PDF–328K Supplementary Material
The molecular portraits of breast tumors are conserved across microarray platforms
Zhiyuan Hu, Cheng Fan, Daniel S Oh, JS Marron, Xiaping He, Bahjat F Qaqish, Chad Livasy, Lisa A Carey, Evangeline Reynolds, Lynn Dressler, Andrew Nobel, Joel Parker, Matthew G Ewend, Lynda R Sawyer, Junyuan Wu, Yudong Liu, Rita Nanda, Maria Tretiakova, Alejandra Ruiz Orrico, Donna Dreher, Juan P Palazzo, Laurent Perreard, Edward Nelson, Mary Mone, Heidi Hansen, Michael Mullins, John F Quackenbush, Matthew J Ellis, Olufunmilayo I Olopade, Philip S Bernard, Charles M Perou
BMC Genomics. 2006; 7: 96. Published online 2006 April 27. doi: 10.1186/1471-2164-7-96
PMCID:
PMC1468408
Abstract Full Text PDF–765K Supplementary Material
Options available for profiling small samples: a review of sample amplification technology when combined with microarray profiling
Vigdis Nygaard, Eivind Hovig
Nucleic Acids Res. 2006; 34(3): 996–1014. Published online 2006 February 9. doi: 10.1093/nar/gkj499
PMCID:
PMC1363777
Abstract Full Text PDF–206K
BEST PRACTICE No 185 Cytological and molecular diagnosis of lymphoma
G Kocjan
J Clin Pathol. 2005 June; 58(6): 561–567. doi: 10.1136/jcp.2004.019133
PMCID:
PMC1770685
Abstract Full Text PDF–289K
Microarray Applications in Cancer Research
Il-Jin Kim, Hio Chung Kang, Jae-Gahb Park
Cancer Res Treat. 2004 August; 36(4): 207–213. Published online 2004 August 31. doi: 10.4143/crt.2004.36.4.207
PMCID:
PMC2843894
Abstract Full Text PDF–576K
Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression
Daniel R. Rhodes, Jianjun Yu, K. Shanker, Nandan Deshpande, Radhika Varambally, Debashis Ghosh, Terrence Barrette, Akhilesh Pandey, Arul M. Chinnaiyan
Proc Natl Acad Sci U S A. 2004 June 22; 101(25): 9309–9314. Published online 2004 June 7. doi: 10.1073/pnas.0401994101
PMCID:
PMC438973
Abstract Full Text PDF–1.0M Supplementary Material
Multi-tissue gene-expression analysis in a mouse model of thyroid hormone resistance
Lance D Miller, Peter McPhie, Hideyo Suzuki, Yasuhito Kato, Edison T Liu, Sheue-yann Cheng
Genome Biol. 2004; 5(5): R31. Published online 2004 April 29.
PMCID:
PMC416467
Abstract Full Text PDF–425K Supplementary Material
A prognostic index for operable, node-negative breast cancer
M McCallum, C Baker, K Gillespie, B Cohen, H Stewart, R Leonard, D Cameron, R Leake, J Paxton, A Robertson, C Purdie, A Gould, M Steel
Br J Cancer. 2004 May 17; 90(10): 1933–1941. Published online 2004 April 27. doi: 10.1038/sj.bjc.6601826
PMCID:
PMC2409476
Full Text PDF–262K
Molecular profiling of breast cancer: clinical implications
S Cleator, A Ashworth
Br J Cancer. 2004 March 22; 90(6): 1120–1124. Published online 2004 March 2. doi: 10.1038/sj.bjc.6601667
PMCID:
PMC2409657
Full Text PDF–131K
Can breast MRI help in the management of women with breast cancer treated by neoadjuvant chemotherapy?
R M L Warren, L G Bobrow, H M Earl, P D Britton, D Gopalan, A D Purushotham, G C Wishart, J R Benson, W Hollingworth
Br J Cancer. 2004 April 5; 90(7): 1349–1360. Published online 2004 March 2. doi: 10.1038/sj.bjc.6601710
PMCID:
PMC2409692
Full Text PDF–176K
Expression profiling of small cellular samples in cancer: less is more
J G Glanzer, J H Eberwine
Br J Cancer. 2004 March 22; 90(6): 1111–1114. Published online 2004 February 24. doi: 10.1038/sj.bjc.6601668
PMCID:
PMC2409658
Full Text PDF–110K
Utility of Linearly Amplified RNA for RT-PCR Detection of Chromosomal Translocations : Validation Using the t(2;5)(p23;q35) NPM-ALK Chromosomal Translocation
Jonathan A. Schumacher, Stephen D. Jenson, Kojo S. J. Elenitoba-Johnson, Megan S. Lim
J Mol Diagn. 2004 February; 6(1): 16–21.
PMCID:
PMC1867461
Abstract Full Text PDF–330K
Microarray technology and its effect on breast cancer (re)classification and prediction of outcome
Fatima Cardoso
Breast Cancer Res. 2003; 5(6): 303–304. Published online 2003 October 9.
PMCID:
PMC314420
Full Text PDF–33K
Small amplified RNA-SAGE: an alternative approach to study transcriptome from limiting amount of mRNA
Catheline Vilain, Frederick Libert, David Venet, Sabine Costagliola, Gilbert Vassart
Nucleic Acids Res. 2003 March 15; 31(6): e24.
PMCID:
PMC152878
Abstract Full Text PDF–253K
Optimization and evaluation of T7 based RNA linear amplification protocols for cDNA microarray analysis
Hongjuan Zhao, Trevor Hastie, Michael L Whitfield, Anne-Lise Børresen-Dale, Stefanie S Jeffrey
BMC Genomics. 2002; 3: 31. Published online 2002 October 30. doi: 10.1186/1471-2164-3-31
PMCID:
PMC137577
Abstract Full Text PDF–608K Supplementary Material
You are here: NCBI > Literature > PubMed Central
Write to the Help Desk