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J Clin Invest. May 2, 2005; 115(5): 1267–1274.
Published online Apr 14, 2005. doi:  10.1172/JCI200522782
PMCID: PMC1077171

The N-terminal domain of thrombomodulin sequesters high-mobility group-B1 protein, a novel antiinflammatory mechanism


Thrombomodulin (TM) is an endothelial anticoagulant cofactor that promotes thrombin-mediated formation of activated protein C (APC). We have found that the N-terminal lectin-like domain (D1) of TM has unique antiinflammatory properties. TM, via D1, binds high-mobility group-B1 DNA-binding protein (HMGB1), a factor closely associated with necrotic cell damage following its release from the nucleus, thereby preventing in vitro leukocyte activation, in vivo UV irradiation–induced cutaneous inflammation, and in vivo lipopolysaccharide-induced lethality. Our data also demonstrate antiinflammatory properties of a peptide spanning D1 of TM and suggest its therapeutic potential. These findings highlight a novel mechanism, i.e., sequestration of mediators, through which an endothelial cofactor, TM, suppresses inflammation quite distinctly from its anticoagulant cofactor activity, thereby preventing the interaction of these mediators with cell surface receptors on effector cells in the vasculature.


Thrombomodulin (TM) was first identified as an endothelium-specific membrane protein (1), and the TM–protein C (TM-PC) pathway is an essential anticoagulant-antithrombotic mechanism at least in part via inhibition of thrombin’s procoagulant activity and limiting the generation of thrombin itself (16). The association of thrombin and TM on the endothelial surface also redirects the enzyme’s substrate specificity toward activation of plasma PC (16), and activated protein C (APC) exerts additional anticoagulant effects by inactivating procoagulant cofactors Va and VIIIa (2, 3). Structurally, the extracellular portion of TM is composed of three domains: an N-terminal lectin-like domain (D1), followed by an EGF-like domain (D2) consisting of six EGF-like repeats, and an O-glycosylation–rich domain (D3) (46). D2 is critical for the protein’s anticoagulant cofactor activities (i.e., inhibition of thrombin and promotion of APC formation) (5, 6).

Recent studies have shown that TM also plays an important role in attenuation of the inflammatory response in settings such as endotoxin-induced tissue damage, cytokine production, glomerulonephritis, and atherosclerosis (712). One mechanism for TM’s antiinflammatory effects relates to properties of APC. For example, interaction of APC with the endothelial PC receptor triggers a cascade of antiinflammatory responses (13), which are quite distinct from the intrinsic anticoagulant properties of APC. The latter properties are likely to underlie, in large part, the success of the use of APC as a protective therapy in patients with sepsis (14). However, because of its strategic location on the vascular surface, we reasoned that TM itself might have the capacity to modulate inflammatory mechanisms. In this context, recent findings in mice expressing mutant TM variants and with TM peptide fragments in cell culture have pointed to a role for D1 of TM as a potential regulator of proinflammatory phenomena (15). Since the anticoagulant cofactor activity of TM is contained in D2, antiinflammatory properties of D1 have the potential to be distinct from APC formation.

High-mobility group-B1 DNA-binding protein (HMGB1) is a nuclear architectural chromatin-binding protein released by necrotic cells (16) that has recently been identified as a mediator of endotoxin-induced lethality (17) acting at least in part as a proinflammatory cytokine (1821). Engagement of the receptor for advanced glycation endproducts (RAGE) (22, 23) by extracellular HMGB1 triggers activation of proinflammatory signaling pathways, such as those resulting in elaboration of reactive oxygen intermediates (ROIs) and NF-κB activation (2325). Like TM, RAGE is also expressed on the endothelium (26), where it is optimally positioned to interact with HMGB1 released from cells damaged at the earliest stages of the host response. The starting point for our study was the hypothesis that TM might interact with a key inflammatory mediator, such as HMGB1, thereby preventing it from engaging cellular receptors (such as RAGE) and contributing to the inflammatory response.

Our results demonstrate that TM does bind HMGB1, thereby preventing its interaction with RAGE and suppressing induction of proinflammatory events, and that this interaction occurs at the level of D1 of TM. Furthermore, a peptide spanning D1 prevents UV irradiation–induced skin injury and lipopolysaccharide-induced (LPS-induced) lethality in mice. These data provide insight into a novel antiinflammatory mechanism at the level of the vessel wall, i.e., TM sequestration of HMGB1, and suggest possible therapeutic potential of D1 of TM.


TM binds to HMGB1.

One of the hallmarks of the host inflammatory/procoagulant response is its localization to sites of injury in the vessel wall. Thus, antiinflammatory and anti-thrombotic cofactors would be likely to have essential roles in limiting host response cascades to a perturbed region of the vasculature, potentially through their ability to sequester inflammatory mediators. In this context, previous studies have shown that TM, an anticoagulant cofactor of the vessel wall, also has antiinflammatory properties quite distinct from its effect on the coagulation system (1315). Those considerations led us to hypothesize that TM might bind to HMGB1, a potent proinflammatory mediator released by necrotic cells, thereby preventing dissemination of phlogogenic stimuli. Co-incubation of recombinant human soluble TM (rhs-TM) and HMGB1 was followed by immunoprecipitation with anti-HMGB1 IgG and immunoblotting of the immune precipitates with anti-TM IgG (Figure (Figure1A).1A). An immunoreactive TM band was observed when anti-HMGB1 IgG was used for immunoprecipitation, but not when it was substituted by nonimmune IgG (Figure (Figure11A).

Figure 1
TM, via D1, binds to HMGB1. (A) For IP, rhs-TM (10 nM) and HMGB1 (10 nM) were mixed and incubated, followed by the addition of protein A agarose beads conjugated to anti-HMGB1 IgG (αHMGB1) or nonimmune IgG (IgG). Immunoprecipitates were solubilized, ...

Binding studies using surface plasmon resonance (SPR), performed to directly assess the interaction of TM and immobilized HMGB1, demonstrated dose-dependent binding in the nanomolar range (not shown). In view of previous findings indicating antiinflammatory effects of the N-terminal portion of TM (i.e., distinct from the anticoagulant domain of TM; ref. 15), we considered the lectin-like region as the possible site for HMGB1 interaction with TM (Figure (Figure1B).1B). Thus, we generated a recombinant polypeptide corresponding to D1 (P-D1) and another corresponding to D2 and D3 (P-D2+3). SPR binding studies with HMGB1 immobilized on sensor chips and P-D1 in the mobile phase demonstrated nanomolar binding comparable to that observed with full-length TM (not shown). In contrast, there was no observed binding between HMGB1 and P-D2+3 (not shown).

Effect of TM-HMGB1 interaction on binding of HMGB1 to RAGE.

RAGE is a signal transduction receptor that mediates, at least in part, the interaction of HMGB1 with certain cell types leading to cellular activation (25). Thus, it was important to understand the effect of the binding of TM to HMGB1 on the interaction of HMGB1 with RAGE. For these studies, soluble RAGE (sRAGE) with a polyhistidine tail (sRAGE-His) was incubated with HMGB1 in the presence/absence of rhs-TM, and the mixture was precipitated by the addition of nickel resin beads to adsorb sRAGE-His (Figure (Figure1C).1C). sRage spans the extracellular ligand-binding domain of RAGE (26). In experiments in cellular systems, sRAGE serves as a decoy by binding ligands and preventing their interaction with cell surface receptor (26). Immunoprecipitation of mixtures of sRAGE-His and HMGB1 with nickel beads, followed by immunoblotting of immune precipitates with anti-HMGB1 IgG, showed an HMGB1-immunoreactive band (Figure (Figure1C,1C, lane 2). This result is consistent with previous data indicating that RAGE binds to HMGB1. When sRAGE and HMGB1 were incubated in the presence of TM, the same immunoprecipitation-immunoblotting procedure showed the intensity of the HMGB1 band was reduced, indicating that sRAGE and TM compete for binding to HMGB1 (Figure (Figure1C,1C, lane 3). As might be predicted from these results, using a competitive binding assay with immobilized sRAGE-His, the addition of rhs-TM decreased, in a dose-dependent manner, the binding of HMGB1 to RAGE (Figure (Figure11D).

Given our SPR results analyzing the interaction of TM fragments with HMGB1 (see above), we used these portions of TM in immunoprecipitation studies. When the immunoprecipitation-immunoblotting protocol was applied to mixtures sRAGE-His and HMGB1 incubated in the presence of P-D1, intensity of the HMGB1-immunoreactive band was decreased (Figure (Figure1C,1C, lane 4). In contrast, the P-D2+3 fragment of TM did not inhibit immunoprecipitation-immunoblotting of HMGB1-sRAGE complex (Figure (Figure1C,1C, lane 5). Consistent with those data, the addition of increasing amounts of P-D1 to the competitive binding assay with sRAGE-His and HMGB1 led to dose-dependent inhibition of the binding of HMGB1 to RAGE, whereas the addition of P-D2+3 was without effect (Figure (Figure11D).

In order to assess whether TM would intercept the interaction of HMGB1 with RAGE in a cell-based system, we performed binding experiments using an HMGB1–maltose binding protein (HMGB1-MBP) fusion protein and COS-7 cells stably-transfected to overexpress RAGE. RAGE-transfected COS-7 cells displayed a substantial increase in cell surface RAGE antigen, based on immunofluorescence, and an increase in total RAGE antigen, based on immunoblotting, compared with mock-transfected controls (Figure (Figure1E,1E, right panel). Incubation of HMGB1-MBP with RAGE-transfected COS-7 cells resulted in increased association of HMGB1-MBP with the cell monolayer (based on an assay for MBP) compared with that of mock-transfected controls (Figure (Figure1E,1E, left panel). The latter signal was blocked in the presence of an excess of rhs-TM, HMGB1 (i.e., free HMGB1 not bound to MBP), the P-D1 fragment of TM, or antibody against HMGB1 (Figure (Figure1E,1E, left panel). In contrast, the P-D2+3 fragment was without effect.

Taken together, these data are consistent with the concept that the P-D1 portion of TM mediates the interaction with HMGB1 and that TM-HMGB1 binding prevents RAGE engagement by HMGB1. Thus, the binding sites on HMGB1 for RAGE and P-D1 appear to overlap. Furthermore, as the anticoagulant cofactor activity of TM resides in the P-D2+3 fragment, these results indicate that the ability of TM to bind HMGB1 is due to P-D1 and is distinct from the anticoagulant ability.

Effect of TM on HMGB1-mediated cellular activation in vitro.

We performed further experiments with purified HMGB1 protein and human monocytic THP-1 cells to determine whether TM might modulate HMGB1’s properties as a proinflammatory cytokine due at least in part to interaction with RAGE. Incubation of HMGB1 with THP-1 cells increased the expression of an NF-κB–dependent reporter (Figure (Figure2A).2A). Inhibition of NF-κB–mediated transcription by the addition of sRAGE supported the view that HMGB1-RAGE interaction was involved in the activation of NF-κB. Furthermore, in the presence of rhs-TM, HMGB1-induced expression of the NF-κB reporter was suppressed to background levels (Figure (Figure2A).2A). Because ROIs have an important role in the signaling pathway leading to NF-κB activation in certain cases, we assessed whether HMGB1 would induce the generation of ROIs in a RAGE-dependent manner that could be inhibited by TM. Incubation of HMGB1 with THP-1 cells loaded with 2′,7′-dichlorofluorescein diacetate (DCF-DA) resulted in a prominent fluorescent signal (not shown). The addition of rhs-TM strongly suppressed the formation of the fluorescent adduct, as did the addition of P-D1. In contrast, P-D2+3 and a fragment of TM spanning the last 3 EGF-like domains (E456) (a truncated form of TM encompassing a minimal anticoagulant domain; ref. 6), TM fragments that do not include P-D1, were without effect (not shown). Thus, HMGB1-mediated activation of THP-1 cells, at the level of NF-κB activation and generation of ROIs, can be suppressed in the presence of the P-D1 portion of TM.

Figure 2
TM, via D1, prevents proinflammatory effects of HMGB1 in vitro. (A) Effect of HMGB1 on NF-κB–dependent gene transcription. THP-1 cells were transfected with an NF-κB promoter-reporter (SEAP) construct. Then, THP-1 cells (106 cells/ml) ...

In order to extend these results using an established cell line, we isolated mononuclear phagocytes from human blood. Mononuclear phagocytes were preloaded with DCF-DA and were incubated with HMGB1. A fluorescent signal corresponding to oxidation of DCF-DA was observed in the presence of HMGB1. The addition of rhs-TM and P-D1, but not P-D2+3 or E456, resulted in attenuation of the fluorescent signal (Figure (Figure2B).2B). These data indicate that HMGB1-mediated activation of THP-1 cells and blood-derived mononuclear phagocytes can be prevented in the presence of P-D1 of TM, presumably by TM-mediated sequestration of HMGB1.

Role of HMGB1 in cutaneous inflammation.

To further investigate the functional role of HMGB1 in inflammation and its potential regulation by TM, we used a cutaneous model of UV irradiation–induced inflammation. In preliminary experiments, we observed that a single dorsal exposure of the mouse ear skin to UV irradiation (wavelength, 254 nm) caused marked inflammation that could be monitored at the early stages by swelling of the ear (27). Inflammation induced by UV irradiation (1,000 J/m2) developed over 3 days (Figure (Figure3A),3A), was sustained for up to 5 days, and displayed evidence of tissue/cell damage (not shown). Such UV irradiation–induced skin injury was associated with an increase in nuclear expression of HMGB1, as well as leakage of HMGB1 from the nucleus to extranuclear areas (not shown).

Figure 3
Central role of HMGB1 in UV irradiation–induced skin injury and the effect of TM and TM-derived peptides on HMGB1-mediated local and systemic inflammation. (A) In vivo effect of HMGB1 blockade on UV irradiation–induced cutaneous inflammation. ...

To probe the mechanisms underlying the host response to UV irradiation–induced cutaneous injury, we administered sRAGE. In the presence of sRAGE, blunting of UV irradiation–induced ear swelling was observed (Figure (Figure3A,3A, upper panel). These data suggested the possibility that HMGB1-RAGE interaction might contribute to the inflammatory response, leading us to test the effect of anti-HMGB1 IgY (Figure (Figure3A,3A, middle panel); ear swelling was reduced and the extent of reduction was similar to that observed after administration of sRAGE. These data indicate that ear swelling in the UV irradiation model is highly dependent on HMGB1.

Based on a role for HMGB1 in this model of cutaneous inflammation, we examined the effect of TM on the HMGB1-mediated cutaneous inflammation. The administration of rhs-TM demonstrated a protective effect on UV irradiation–induced cutaneous injury (Figure (Figure3A,3A, lower panel). Furthermore, the antiinflammatory effect of TM was similar in extent to what we observed previously with sRAGE and anti-HMGB1 IgY, consistent with a similar mode of action; i.e., prevention of the interaction of HMGB1 with cell surface acceptor sites such as RAGE. To further characterize the antiinflammatory properties of TM in this system, we performed studies with P-D1 and P-D2+3. In UV irradiation–induced skin inflammation, systemic administration of rhs-TM, P-D1, or sRAGE resulted in a significant blunting of the inflammatory response, based on ear swelling (Figure (Figure3B).3B). In contrast, the effect of P-D2+3, although showing a trend toward decreased ear swelling, did not achieve statistical significance (P-D2+3 has antiinflammatory effects in vivo that probably reflect its ability to support thrombin-mediated activation of PC, whereas P-D1 is devoid of anticoagulant activity). Histological studies to evaluate characteristics of the inflammatory response (Figure (Figure3C)3C) and quantification of leukocyte infiltration (Figure (Figure3D)3D) and local TNF-α antigen accumulation (Figure (Figure3E)3E) in affected skin each showed significant reductions in animals treated with rhs-TM, P-D1, or sRAGE. These results demonstrate that HMGB1 is an important mediator of UV irradiation–induced skin injury and that TM, due to P-D1, attenuates the proinflammatory properties of HMGB1 in vivo.

Given the partially protective effect of treatment with either sRAGE or TM, we considered the possibility that a combination of both agents might have a more substantial effect on UV irradiation–induced cutaneous inflammation. For this purpose, animals were treated with TM or sRAGE alone or with sRAGE plus rhs-TM, P-D1, or P-D2+3. The effect on the inflammatory response was evaluated in terms of ear swelling (Figure (Figure4A)4A) and leukocyte infiltration of the skin (Figure (Figure4B).4B). No additive effect or synergy was observed; the protective effect of the administration of either sRAGE or TM was not bolstered by the presence of the other agent. These data are consistent with the idea that HMGB1 is the target for both agents.

Figure 4
RAGE-dependent and -independent mechanism of HMGB1-mediated events and the inhibitory effects of TM and TM-derived peptides. (A and B) Skin inflammation was induced in the mouse ear using UV irradiation. C57/BL6 mice (RAGE+/+; white bars) ...

In addition, it was important to determine the extent to which cell surface RAGE was the receptor sought out by HMGB1. This led us to repeat our studies of UV irradiation–induced dermal inflammation in homozygous RAGE-null mice. Studies performed in mice devoid of RAGE demonstrated prominent reduction in ear swelling (Figure (Figure4A)4A) and a partial decrease in leukocyte infiltration (Figure (Figure4B)4B) compared with that of strain-matched wild-type controls (RAGE-null and wild-type animals were on a C57BL/6 background). Administration of sRAGE, TM, or P-D1 to RAGE-null mice subjected to the UV irradiation–induced ear inflammation protocol displayed slightly increased protection with respect to ear swelling (Figure (Figure4A)4A) and a more prominent reduction in leukocyte infiltration (Figure (Figure4B).4B). These data indicate that cell surface RAGE, potentially on multiple cells in the dermis, is an important though not exclusive target of HMGB1 in UV irradiation–induced dermal inflammation.

The N-terminus–derived TM peptide has protective effects for LPS-induced lethality.

Given recent data suggesting a link between HMGB1 released from injured tissue and endotoxin-induced lethality in mice (16, 17), we tested whether rhs-TM and P-D1 might also have protective effects in this model (Figures (Figures3F3F and and4C).4C). We used a dose of LPS (10 mg/kg) resulting in 100% lethality by 96 hours. Systemic (i.p.) treatment of animals with anti-HMGB1 IgY, administered 2, 12, and 24 hours after LPS, had a protective effect with respect to lethality at 4 days, whereas the same regimen using nonimmune IgY was without effect (Figures (Figures3F3F and and4D).4D). Similarly, i.p. administration of rhs-TM or P-D1, but not P-D2+3 (in each case, according to the same schedule), had a complete protective effect comparable to that observed with anti-HMGB1 IgY (Figure (Figure3F3F and 4C).

Consistent with results of a previous study (28), RAGE-null mice exhibited a prominent decrease in LPS-induced mortality: 50% lethality according to our protocol versus 100% for strain-matched C57BL/6 controls (Figure (Figure4C).4C). When RAGE-null mice were treated with anti-HMGB1 IgY antibody, rhs-TM, or P-D1, mortality in response to LPS was almost completely eliminated (Figure (Figure4,4, C and D). These data are consistent with the concept that RAGE-independent pathways also contribute to the lethality of LPS by a mechanism that appears to involve HMGB1 and appears to be prevented by P-D1 of TM.


The initial notion of an endothelial cell surface that was inert with respect to procoagulant and proinflammatory events due to lack of expression of inducible cofactors, receptors, and mediators, such as tissue factor, E-selectin, and cytokines/chemokines, has undergone considerable revision (29). TM is particularly relevant in this context. As a high-affinity vascular receptor for thrombin, it binds circulating thrombin resulting in inhibition of the enzyme’s procoagulant activity and promotion of PC activation (16), as well as preventing thrombin’s interaction with protease-activated receptors (30). APC has direct anticoagulant properties at least in part in concert with protein S (31). In addition, this enzyme appears to have a spectrum of antiinflammatory properties (8, 14) that may be related to events mediated at the level of the endothelial PC receptor (13).

Another aspect of the biology of TM was suggested by infusion studies in which rhs-TM demonstrated protective properties in a range of models, including glomerulonephritis, sepsis, and ischemic settings (811). In these models, anticoagulation alone does not reproduce the effects of TM infusion (32, 33). Although the antiinflammatory properties of APC could and are likely to contribute, we suspected that TM itself might be involved. The first evidence supporting this view was obtained from the studies of Conway and colleagues (15) demonstrating that transgenic mice lacking D1 of TM displayed enhanced vulnerability to LPS challenge, with greater accumulation of polymorphonuclear neutrophils (PMNs) in their lungs and reduced survival. Furthermore, experiments in cell culture using recombinant D1 of TM showed suppression of PMN-EC adhesion, and decreased cytokine-induced activation of NF-κB and Erk1/2 (15). These data suggested that a polypeptide encompassing the lectin-like domain (called P-D1 in our studies) might have antiinflammatory properties in vivo.

The results of our studies demonstrate that TM binds HMGB1 via D1. These findings elucidate a novel and specific antiinflammatory property of TM that could be particularly relevant at the level of the vessel wall. Studies of HMGB1 have linked its release from cells to necrotic death (16, 17). Release of HMGB1 signals severe cellular damage and propagates an inflammatory response in neighboring cells as HMGB1 interacts with receptors such as RAGE (1622). Binding of HMGB1 by TM provides a mechanism for damping such amplification of the inflammatory response. For example, in a severely injured vessel, one would expect loss of the integrity of cells bearing TM, including local release of TM (32, 34). Under these conditions, HMGB1 present in the extracellular environment would magnify the host response by binding to proinflammatory targets in the local milieu (1620). However, once an adjacent portion of the vessel wall with intact endothelium is encountered, TM-bearing cells could sequester HMGB1, preventing the latter from reaching receptors with proinflammatory effects. Thus, the binding of TM and HMGB1 to each other could potentially “brake” the inflammatory process.

There are many questions raised by our results concerning mechanistic and practical considerations. It would be important to know if TM could bind HMGB1 and thrombin simultaneously, or if occupancy of TM by one would obviate binding of the other. The fate of the TM-HMGB1 complex would also be important to determine. For example, does the TM-HMGB1 complex dissociate, thereby “handing off” HMGB1 to other pathways involved in clearing HMGB1 from the circulation/cell surface? Also, the detailed pharmacokinetics of P-D1 and related molecules need to be worked out to determine if this approach is feasible from the standpoint of drug delivery.

Our findings have elucidated an unexpected antiinflammatory property of TM residing in D1, namely, binding of HMGB1. Although other protective properties may also be potential in this portion of TM, links between the protective effects of anti-HMGB1 and the D1-derived peptide suggest that TM-HMGB1 interaction may be relevant to the inflammatory response in vivo. Our results move the field forward by demonstrating a novel antiinflammatory mechanism, sequestration of HMGB1 by TM, and suggesting a potential means for exploiting this observation in the development of a therapeutic agent based on D1.


Cells and cell culture.

Human leukemia THP-1 cells were obtained from the American Type Culture Collection. Human peripheral blood mononuclear phagocytes were harvested by differential centrifugation and adherence (the mononuclear phagocyte population) from human blood (21). Human umbilical cord endothelial cells (HUVECs) were cultured from umbilical cords according to established methods (3). All procedures involving human materials were conducted under the auspices of a protocol approved by the institutional review board of Aiiku Hospital and Kagoshima University, Kagoshima, Japan. THP-1 cells and HUVECs were cultured in RPMI 1640 medium supplemented with 10% FCS, penicillin (100 U/ml), and streptomycin sulfate (100 μg/ml). The monkey kidney–derived cell line COS-7 was maintained in DMEM supplemented with the same additives described above. For the generation of RAGE-overexpressing cells, cDNA encoding full-length RAGE was cloned into the pCI-neo vector, and then the cDNA construct was transfected into COS-7 cells (35). Stable transfectants were selected in DMEM supplemented with G418 (750 μg/ml). RAGE expression in transfected COS-7 cells was characterized by immunoblotting (for total RAGE expression) and fluorescence immunostaining on nonpermeabilized cells (for cell surface RAGE expression) using polyclonal anti-RAGE IgG (35). For determining RAGE expression, the COS-7 monolayer was fixed with formaldehyde (4%) and “reacted with” anti-RAGE IgG, and then the amount of bound IgG on cell surface was measured using FITC-conjugated second antibody.


Female BALB/C mice and C57BL/6 mice (8–10 weeks old; purchased from Japan SLC) were housed in the pathogen-free facility of the Animal Resource Center, Kagoshima University. RAGE-null mice, backcrossed into the C57BL/6 strain (F7), were provided by Hiroshi Yamamoto (Kanazawa University, Kanazawa, Japan). Experiments involving animals were approved by the Institutional Animal Care and Use Committee of Kagoshima University, Kagoshima, Japan, and were conducted according to NIH guidelines.

Anti-HMGB1 IgY neutralizing HMGB1.

For the preparation of monospecific anti-HMGB1 antibody, IgY-class antibody from the egg yolk of HMGB1-immunized hens was isolated and purified according to the method of Hassl and Aspock (36).

Assays for TM-HMGB1 interaction.

For immunoprecipitation, rhs-TM, prepared as described (5, 6, 37), and purified human HMGB1 (18, 38) (10 nM, in each case) were incubated for 1 hour at 37°C in immunoprecipitation buffer (20 mM Tris-HCl, 150 mM NaCl, 1% NP-40, 1 mM PMSF, and 0.1% BSA; final volume, 1 ml). Then, protein A agarose beads conjugated with polyclonal anti-HMGB1 (approximately 10 μg of IgG was adsorbed to 20 μl of protein A agarose bead solution) were added to protein mixtures (200 μl each) and samples were incubated for an additional 1 hour. Protein A agarose was harvested by centrifugation and the immune precipitate was solubilized in reducing SDS-PAGE sample buffer (2% SDS; 50 μl). Samples (10 μl/lane) were subjected to reduced SDS-PAGE (10 %) followed by immunoblotting with monoclonal anti-HMGB1 IgG (BD Biosciences — Pharmingen). Sites of binding of the primary antibody were visualized with second antibody conjugated to HRP. For determining the ability of TM to inhibit the binding of RAGE to HMGB1, the following pull-down assay was developed. The sRAGE-His was prepared as described previously (23, 39). Briefly, cDNA encoding the extracellular domain of RAGE was cloned into the pQE vector (Qiagen Inc.). With a nickel resin column, recombinant histidine-tagged sRAGE was purified from extract of Escherichia coli transformed with the vector. HMGB1 and sRAGE-His (10 nM in each case) were incubated for 1 hour at 37°C in PBS (200 μl per sample) containing 0.1% BSA. Nickel resin beads (20 μl) were then added to precipitate sRAGE-His, the resin was harvested by centrifugation, and immune precipitates were solubilized in reducing SDS-PAGE sample buffer (2% SDS; 50 μl). Samples (10 μl/lane) were subjected to reduced SDS-PAGE (10%) followed by immunoblotting with anti-HMGB1 IgG (0.2 μg/ml). The effect of TM on sRAGE-HMGB1 interaction was studied by the addition of various TM-derived peptides at a concentration of 1 μM for each: rhs-TM, P-D1, P-D2+3, and E456. The TM-derived peptides used in this study were prepared as described previously (6, 37).

A quantitative assay for assessing the ability of TM-derived peptides to block HMGB1-sRAGE interaction was developed as follows. A 96-well plate with aldehyde-activated amine-conjugated plastic (Sumitomo Inc.) was used to covalently link the C terminus of HMGB1. Then, sRAGE-His (10 nM) in PBS containing 0.1% BSA, in the presence/absence of the indicated concentrations (Figure (Figure1C)1C) of competitor TM-derived peptides, was added. Bound sRAGE was quantified using an antibody to the histidine tag of sRAGE, purchased from Qiagen Inc. For the cell-based HMGB1-RAGE binding assay, we cloned cDNA encoding HMGB1 into pMAL-c2X (New England Biolabs) to generate the recombinant HMGB1-MBP fusion protein. Briefly, RAGE-transfected cells (COS-7) or mock-transfected controls were incubated for 30 minutes at 37°C in DMEM with the HMGB1-MBP fusion protein under the indicated conditions (Figure (Figure1E),1E), followed by washing in PBS and fixation in formaldehyde (4%). Bound HMGB1-MBP associated with the cell surface was quantified using an antibody to the MBP tag (Roche Diagnostics).

SPR analysis.

Binding studies were performed by SPR using the BIAcore as described previously (40). In brief, HMGB1 was immobilized on the CM-5 sensor chips (BIAcore; Amersham Biosciences) using the N-ethyl-N′-(dimethylaminopropyl)carbodiimide/N-hydroxysuccinimide method according to the amine-coupling protocol recommended by the manufacturer. For association analysis, serial dilutions of TM-derived peptides or sRAGE in HBS buffer (10 mM HEPES buffer containing 0.15 M NaCl, 0.005% surfactant P20, and 3 mM EDTA, pH 7.4) were injected onto the sensorchip at 20°C and at a flow rate of 20 μl/min. The surface of the sensorchip was regenerated by elution with 0.2 M glycine-HCl buffer, pH 2.7. Sensorgrams were analyzed to determine kinetic constants (Ka and Kd) by fitting of the data according to a 1:1 Langmuir dissociation/association model using the BIAevaluation 3.2 software. The results reported are approximate apparent Kd values reflecting a ratio of observed “on” and “off” rates.

Assessment of NF-κB activation and cytokines.

NF-κB–dependent transcription was monitored with a reporter gene assay (41). Briefly, cells were transfected with the NF-κB–specific reporter construct containing a 3× NF-κB responsive element (heat-stable secretary alkaline phosphatase [SEAP]; Clontech Laboratory). After transfection and subsequent incubation under the indicated conditions (Figure (Figure2A)2A) for 16 hours, enzymatic activity of SEAP was measured. Levels of cytokines were assayed with a cytokine-specific ELISA kit for TNF-α (R&D Systems Inc).

Monitoring the generation of ROIs.

The generation of ROIs was assessed by incubation of cells for 30 minutes under the indicated conditions (Figure (Figure2B)2B) with DCF-DA (5 μM), and the formation of the fluorescent adduct dichlorofluorescein (DCF) was measured by FACS analysis (Beckman-Coulter) or by using a fluorescent microplate reader (Fluoroscan; BD Biosciences — Pharmacia).

Cutaneous inflammation and LPS models.

The dorsal surfaces of unrestrained BALB/c mice or RAGE-null mice were exposed to UV irradiation (wavelength, 254 nm) at a dose of 1,000 J/m2 using a UV Crosslinker lamp (Amersham Biosciences). Note that controls for experiments with RAGE-null mice (F7 in C57BL/6) used C57BL/6 animals. For assessment of the extent of skin inflammation, ear skin thickness was measured with a caliper-type engineer’s micrometer (27). For histological analysis, ear samples were fixed in formalin and were stained with H&E. Leukocyte infiltration was assessed semi-quantitatively by counting of the number of nuclei per high-power field (HPF; at least 20 HPFs per sample were analyzed and 8 mice per experimental condition were studied). The extent of tissue damage was evaluated by TUNEL assay. Briefly, free 3′-OH DNA termini of DNA fragments were labeled with a digoxigenin-conjugated nucleotide. Digoxigenin-labeled DNA fragments were detected using a biotin-labeled anti-digoxigenin. Certain ear specimens were homogenized and extracted in 10 mM HEPES/10 mM KCl buffer, pH 7.9, with 0.08% NP-40, 0.1 mM EDTA, 1 mM EGTA, 0.5 mM DTT, and 0.5 mM PMSF. Mixtures were centrifuged at 1,000 g for 20 minutes at 4°C. The resulting soluble fraction was considered to be derived from extranuclear protein (i.e., cytosolic material or that released from cells) and was assayed for HMGB1 and TNF-α. Nuclear pellets were re-extracted in 20 mM HEPES/0.4 M NaCl buffer, pH 7.9, 1 mM EDTA, 1 mM EGTA, 1 mM DTT, and 1 mM PMSF, and the supernatant, after centrifugation at 10,000 g for 60 minutes at 4°C, was assessed for its HMGB1 content. Cellular localization of HMGB1 was evaluated immunohistochemically in inflamed skin tissue with monospecific anti-HMGB1 IgG (1 μg/ml), prepared as indicated above. In studies assessing the effect of sRAGE and TM-derived peptides on inflammation, all materials were tested for LPS content with the Limulus amebocyte assay (LPS content was less than 0.25 pg per mg of protein). TM-derived peptides (i.e., rhs-TM, P-D1, and P-D2+3) and sRAGE-His were prepared as described above.

For the systemic endotoxin challenge, LPS (from E. coli serotype O111:B4; purchased from Sigma-Aldrich) was administered i.p. Other agents were given as indicated (Figures (Figures3E3E and and4,4, C and D).

Statistical analysis.

Data were analyzed using Student’s t test, and P values of less than 0.05 were considered significant.


We thank Asahi Chemical Co. for kindly providing rhs-TM and E456, and Satoshi Ogawa (Kanazawa University Graduate School of Medicine) and Takeo Fukuda (Kagoshima University) for helpful suggestions. This study was supported by research grants from the Ministry of Education, Culture, Sports, Science, and Technology of Japan: Grants-in-Aid 13470324 and 14657627 (to I. Maruyama), and 16659493 and 16390516 (to K. Abeyama).


Nonstandard abbreviations used: APC, activated protein C; D1, lectin-like domain; D2, EGF-like domain; D3, O-glycosylated domain; DCF-DA, 2′,7′-dichloro-fluorescein diacetate; E456, fragment of TM spanning the last 3 EGF-like domains; HMGB1, high-mobility group-B1 DNA-binding protein; HPF, high-power field; HUVEC, human umbilical vein endothelial cell; MBP, maltose binding protein; P-D1, recombinant polypeptide corresponding to D1; P-D2+3, recombinant polypeptide corresponding to D2 and D3; PC, protein C; PMN, polymorphonuclear neutrophil; RAGE, receptor for advanced glycation endproducts; rhs-TM, recombinant human soluble TM; ROI, reactive oxygen intermediate; SEAP, secretory alkaline phosphatase; SPR, surface plasmon resonance; sRAGE, soluble RAGE; sRAGE-His, sRAGE with a polyhistidine tail; TM, thrombomodulin.

Conflict of interest: The authors have declared that no conflict of interest exists.


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