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Genetic Dissection of a Prevalent Plasmid-Encoded Conjugation System in Lactococcus lactis

Guillermo Ortiz Charneco, Philip Kelleher, Andrius Buivydas, Hugo Streekstra, Emiel Ver Loren van Themaat, Paul P. de Waal, Jennifer Mahony, Douwe van Sinderen

Front Microbiol. 2021; 12: 680920. Published online 2021 May 28. doi: 10.3389/fmicb.2021.680920

PMCID:: PMC8194271

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The Conjugation Window in an Escherichia coli K-12 Strain with an IncFII Plasmid

Brendan Headd, Scott A. Bradford

Appl Environ Microbiol. 2020 Sep; 86(17): e00948-20. Prepublished online 2020 Jun 26. Published online 2020 Aug 18. doi: 10.1128/AEM.00948-20

PMCID:: PMC7440788

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The Effect of Outer Space and Other Environmental Cues on Bacterial Conjugation

Bar Piscon, Eliana Pia Esposito, Boris Fichtman, Guy Samburski, Lihi Efremushkin, Shimon Amselem, Amnon Harel, Galia Rahav, Raffaele Zarrilli, Ohad Gal-Mor

Microbiol Spectr. 2023 May-Jun; 11(3): e03688-22. Published online 2023 Mar 30. doi: 10.1128/spectrum.03688-22

PMCID:: PMC10269834

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Multiple Layered Control of the Conjugation Process of the Bacillus subtilis Plasmid pLS20

Wilfried J. J. Meijer, D. Roeland Boer, Saúl Ares, Carlos Alfonso, Fernando Rojo, Juan R. Luque-Ortega, Ling Juan Wu

Front Mol Biosci. 2021; 8: 648468. Published online 2021 Mar 18. doi: 10.3389/fmolb.2021.648468

PMCID:: PMC8014075

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Genetic basis of I-complex plasmid stability and conjugation

Zheng Jie Lian, Minh-Duy Phan, Steven J. Hancock, Nguyen Thi Khanh Nhu, David L. Paterson, Mark A. Schembri

PLoS Genet. 2023 Jun; 19(6): e1010773. Published online 2023 Jun 22. doi: 10.1371/journal.pgen.1010773

PMCID:: PMC10286972

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A comprehensive list of genes required for the efficient conjugation of plasmid Rts1 was determined by systematic deletion analysis

Takahiro Murata, Yasuhiro Gotoh, Tetsuya Hayashi

DNA Res. 2024 Feb; 31(1): dsae002. Published online 2024 Feb 1. doi: 10.1093/dnares/dsae002

PMCID:: PMC10838148

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Plasmid Transfer by Conjugation in Gram-Negative Bacteria: From the Cellular to the Community Level

Chloé Virolle, Kelly Goldlust, Sarah Djermoun, Sarah Bigot, Christian Lesterlin

Genes (Basel) 2020 Nov; 11(11): 1239. Published online 2020 Oct 22. doi: 10.3390/genes11111239

PMCID:: PMC7690428

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Factors and Mechanisms Influencing Conjugation In Vivo in the Gastrointestinal Tract Environment: A Review

Wei Liu, Yanhu Huang, Han Zhang, Ziyi Liu, Quanmin Huan, Xia Xiao, Zhiqiang Wang

Int J Mol Sci. 2023 Mar; 24(6): 5919. Published online 2023 Mar 21. doi: 10.3390/ijms24065919

PMCID:: PMC10059276

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Mating pair stabilization mediates bacterial conjugation species specificity

Wen Wen Low, Joshua L. C. Wong, Leticia C. Beltran, Chloe Seddon, Sophia David, Hok-Sau Kwong, Tatiana Bizeau, Fengbin Wang, Alejandro Peña, Tiago R. D. Costa, Bach Pham, Min Chen, Edward H. Egelman, Konstantinos Beis, Gad Frankel

Nat Microbiol. 2022; 7(7): 1016–1027. Published online 2022 Jun 13. doi: 10.1038/s41564-022-01146-4

PMCID:: PMC9246713

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An overview of chemo- and site-selectivity aspects in the chemical conjugation of proteins

Charlotte Sornay, Valentine Vaur, Alain Wagner, Guilhem Chaubet

R Soc Open Sci. 2022 Jan; 9(1): 211563. Published online January 26, 2022. doi: 10.1098/rsos.211563

PMCID:: PMC8790347

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E2/E3‐independent ubiquitin‐like protein conjugation by Urm1 is directly coupled to cysteine persulfidation

Keerthiraju E Ravichandran, Lars Kaduhr, Bozena Skupien‐Rabian, Ekaterina Shvetsova, Mikołaj Sokołowski, Ros´cisław Krutyhołowa, Dominika Kwasna, Cindy Brachmann, Sean Lin, Sebastian Guzman Perez, Piotr Wilk, Manuel Kösters, Przemysław Grudnik, Urszula Jankowska, Sebastian A Leidel, Raffael Schaffrath, Sebastian Glatt

EMBO J. 2022 Oct; 41(20): e111318. Published online 2022 Sep 14. doi: 10.15252/embj.2022111318

PMCID:: PMC9574740

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Delineation of a lactococcal conjugation system reveals a restriction‐modification evasion system

Guillermo Ortiz Charneco, Philip Kelleher, Andrius Buivydas, Sofia Dashko, Paul P. de Waal, Noël N. M. E. van Peij, Richard J. Roberts, Jennifer Mahony, Douwe van Sinderen

Microb Biotechnol. 2023 Jun; 16(6): 1250–1263. Published online 2023 Mar 21. doi: 10.1111/1751-7915.14221

PMCID:: PMC10221548

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Achieving Controlled Biomolecule–Biomaterial Conjugation

Christopher D. Spicer, E. Thomas Pashuck, Molly M. Stevens

Chem Rev. 2018 Aug 22; 118(16): 7702–7743. Published online 2018 Jul 24. doi: 10.1021/acs.chemrev.8b00253

PMCID:: PMC6107854

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A High-Throughput Method for Screening for Genes Controlling Bacterial Conjugation of Antibiotic Resistance

Hanna Alalam, Fabrice E. Graf, Martin Palm, Marie Abadikhah, Martin Zackrisson, Jonas Boström, Alfred Fransson, Chris Hadjineophytou, Linnéa Persson, Simon Stenberg, Matilda Mattsson, Payam Ghiaci, Per Sunnerhagen, Jonas Warringer, Anne Farewell

mSystems. 2020 Nov-Dec; 5(6): e01226-20. Published online 2020 Dec 22. doi: 10.1128/mSystems.01226-20

PMCID:: PMC7762799

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Conjugation of Native-Like HIV-1 Envelope Trimers onto Liposomes Using EDC/Sulfo-NHS Chemistry: Requirements and Limitations

Ehsan Suleiman, Julia Mayer, Elisabeth Lehner, Bianca Kohlhauser, Alexandra Katholnig, Mirjam Batzoni, Dominik Damm, Vladimir Temchura, Andreas Wagner, Klaus Überla, Karola Vorauer-Uhl

Pharmaceutics. 2020 Oct; 12(10): 979. Published online 2020 Oct 16. doi: 10.3390/pharmaceutics12100979

PMCID:: PMC7589475

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Genome-Wide Association Study Reveals Host Factors Affecting Conjugation in Escherichia coli

Laetitia Van Wonterghem, Matteo De Chiara, Gianni Liti, Jonas Warringer, Anne Farewell, Natalie Verstraeten, Jan Michiels

Microorganisms. 2022 Mar; 10(3): 608. Published online 2022 Mar 12. doi: 10.3390/microorganisms10030608

PMCID:: PMC8954029

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Recent developments in chemical conjugation strategies targeting native amino acids in proteins and their applications in antibody–drug conjugates

Min Sun Kang, Theresa Wai See Kong, Joycelyn Yi Xin Khoo, Teck-Peng Loh

Chem Sci. 2021 Oct 27; 12(41): 13613–13647. Published online 2021 Oct 6. doi: 10.1039/d1sc02973h

PMCID:: PMC8549674

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Capsules and their traits shape phage susceptibility and plasmid conjugation efficiency

Matthieu Haudiquet, Julie Le Bris, Amandine Nucci, Rémy A. Bonnin, Pilar Domingo-Calap, Eduardo P. C. Rocha, Olaya Rendueles

Nat Commun. 2024; 15: 2032. Published online 2024 Mar 6. doi: 10.1038/s41467-024-46147-5

PMCID:: PMC10918111

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Targeted bacterial conjugation mediated by synthetic cell-to-cell adhesions

Marta Robledo, Beatriz Álvarez, Ana Cuevas, Sheila González, David Ruano-Gallego, Luis Ángel Fernández, Fernando de la Cruz

Nucleic Acids Res. 2022 Dec 9; 50(22): 12938–12950. Published online 2022 Dec 13. doi: 10.1093/nar/gkac1164

PMCID:: PMC9825185

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Transcriptional control of two distinct lactococcal plasmid-encoded conjugation systems

Guillermo Ortiz Charneco, Philip Kelleher, Andrius Buivydas, Paul P. de Waal, Irma M.H. van Rijswijck, Noël N.M.E. van Peij, Jennifer Mahony, Douwe Van Sinderen

Curr Res Microb Sci. 2024; 6: 100224. Published online 2024 Feb 5. doi: 10.1016/j.crmicr.2024.100224

PMCID:: PMC10873654

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Fig. 1The potential influence of antibiotics on conjugation

(a) Overall conjugation dynamics result from two steps: conjugation and the ensuing population dynamics of the donor (green), the recipient (red), and the transconjugant (yellow). Antibiotics can influence the conjugation dynamics by (b) modulating the conjugation efficiency or by (c) altering the population dynamics by changing the growth rates of one or more populations. Here we assume antibiotics overall promote conjugation as an illustration (b and c), compared to without any treatment (a).

Antibiotics as a selective driver for conjugation dynamics

Nat Microbiol. ;1(6):16044-16044.
Fig. 6Conjugation of HRP to nanobodies.

a Schematic illustration of strategies to conjugate HRP to nanobodies. b Size-exclusion chromatography profile of the HRP-NB16 conjugation mixture. HRP-NB16 conjugation was analyzed by SDS-PAGE. Lane 1, HRP; lane 2, NB16; lane 3, HRP-NB16 conjugation mixture through SEC; lane 4, purified HRP-NB16 conjugate. c Size-exclusion chromatography profile of the HRP-NB29 conjugation mixture. HRP-NB29 conjugation was analyzed by SDS-PAGE. Lane 1, HRP; lane 2, NB29; lane 3, HRP-NB29 conjugation mixture through SEC; lane 4, purified HRP-NB29 conjugate.

Development of a nanobody-based immunoassay for the sensitive detection of fibrinogen-like protein 1

Acta Pharmacol Sin. 2021 Nov;42(11):1921-1929.
Fig 3Cross-validation of in silico conjugation capacity of UGT1A1 with in vitro conjugation capacity.

(A) In silico conjugation capacities (gray bars) of AAP were compared with in vitro conjugation capacities (black bars). (B) In silico and in vitro conjugation capacities of E2 were compared, as done for AAP. (C) Pearson's correlation coefficient was used to assess cross-validation. ND, not detected.

Establishment of the experimental procedure for prediction of conjugation capacity in mutant UGT1A1

PLoS One. 2019;14(11):e0225244.
Figure 3Different types of linkages formed due to various chemical conjugation reactions for active targeting

Stability of the linkages under physiological conditions (pH 7.4): Hydrazide-aldehyde conjugation (acid-labile), amide bond (stable), thiol-thiol conjugation (cleaved under reducing condition), gold-thiol conjugation (stable), thiol/maleimide conjugation (stable), azide/alkyne conjugation (stable) and streptavidin-biotin conjugation (stable).

Emerging concepts in designing next-generation multifunctional nanomedicine for cancer treatment

Biosci Rep. 2022 Jul 29;42(7):BSR20212051.