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Results: 4

1.
Figure 3

Figure 3. Clusters of orthologous groups (COG) classification.. From: Transcriptome Sequencing and De Novo Analysis for Ma Bamboo (Dendrocalamus latiflorus Munro) Using the Illumina Platform.

In total, 10,147 of the 68,229 sequences with Nr hits were grouped into 25 COG classifications.

Mingying Liu, et al. PLoS One. 2012;7(10):e46766.
2.
Figure 4

Figure 4. Ma bamboo unigene similarity comparison with rice and millet and functional classification by GO analysis.. From: Transcriptome Sequencing and De Novo Analysis for Ma Bamboo (Dendrocalamus latiflorus Munro) Using the Illumina Platform.

(A) Similarity search of Ma bamboo sequence against rice and millet. (B) Functional classification of Ma bamboo unigenes with and without homologs with rice and millet.

Mingying Liu, et al. PLoS One. 2012;7(10):e46766.
3.
Figure 2

Figure 2. Functional annotation of assembled sequences based on gene ontology (GO) categorization.. From: Transcriptome Sequencing and De Novo Analysis for Ma Bamboo (Dendrocalamus latiflorus Munro) Using the Illumina Platform.

GO analysis was performed at the level 2 for three main categories (cellular component, molecular function and biological process).

Mingying Liu, et al. PLoS One. 2012;7(10):e46766.
4.
Figure 1

Figure 1. Overview of the Dendrocalamus latiflorus Munro transcriptome sequencing and assembly.. From: Transcriptome Sequencing and De Novo Analysis for Ma Bamboo (Dendrocalamus latiflorus Munro) Using the Illumina Platform.

(A) Length distribution of D. latiflorus Munro transcripts. (B) Size distribution of D. latiflorus Munro unigenes. (C) Log-log plot showing the dependence of unigene lengths on the number of reads assembled into each unigene.

Mingying Liu, et al. PLoS One. 2012;7(10):e46766.

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