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Results: 5

1.
Figure 2

Figure 2. Distribution of microsatellites with varying repeat units in BAC-end sequences.. From: Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.).

N: mono-nucleotide repeats; NN: di-nucleotide repeats; NNN: tri-nucleotide repeats; NNNN: tetra-nucleotide repeats; NNNNN: penta-nucleotide repeats and NNNNNN: hexa-nucleotide repeats.

Mahendar Thudi, et al. PLoS One. 2011;6(11):e27275.
2.
Figure 4

Figure 4. Number of DArT markers in different PIC value classes.. From: Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.).

Polymorphic markers have been grouped into five classes of PIC values namely 0.01– 0.10, 0.11–0.20, 0.21– 0.30, 0.31– 0.40 and 0.41–0.50.

Mahendar Thudi, et al. PLoS One. 2011;6(11):e27275.
3.
Figure 3

Figure 3. Number of BES-SSR markers in different PIC value classes.. From: Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.).

The number of di-, tri-, tetra-, penta-, hexa- nucleotide repeats and compound SSRs in different PIC value classes are in blue, light blue, yellow, purple, dark red and green respectively.

Mahendar Thudi, et al. PLoS One. 2011;6(11):e27275.
4.
Figure 1

Figure 1. Distribution of Class I and Class II repeats in newly isolated chickpea microsatellites.. From: Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.).

Class I microsatellites contain >20 nucleotides, Class II repeats perfect SSRs with >12 but <20 nucleotides. Among Class I repeats, tri-nucleotide repeats were most abundant, followed by di-nucleotide repeats, while in Class II repeats, penta-nucleotide repeats were most prevalent, followed by hexa-repeats. N, mono-nucleotide repeats; NN, di-nucleotide repeats; NNN, tri-nucleotide repeats; NNNN, tetra-nucleotide repeats; NNNNN, penta-nucleotide repeats, NNNNNN, hexa-nucleotide repeats.

Mahendar Thudi, et al. PLoS One. 2011;6(11):e27275.
5.
Figure 5

Figure 5. Interspecific reference genetic map with 1,291 loci, spanning 845.56 cM.. From: Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.).

The map distance is indicated on the left and the marker names on the right side of each linkage group. Each linkage group is divided into 10 cM bins. Marker series are colour coded: CaM (red), DArT (brown), ICCeM (green), CISR (light green), COS-SNP (pink), CAPS (blue) and legacy markers (black).

Mahendar Thudi, et al. PLoS One. 2011;6(11):e27275.

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