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1.
FIG. 1.

FIG. 1. From: Distribution of Endogenous Retroviruses in Crocodilians .

NJ tree of 286 putative amino acids of the pol gene from CERV, using chicken ERV sequences as an outgroup (left), and basing the host tree on nuclear, mitochondrial, and morphological data (right), modified with author's permission (5). The column next to the viral tree shows the number of stop codons and deletions observed for the pro-pol reading frame in each CERV. The value on the tree node indicates bootstrap branch support (1,000 replicates). □, Crocodylidae; ▴, Alligatoridae; ⋄, Gavialidae; RV, CERVs from other studies (16, 17); GGERV, chicken ERVs. Branch lengths are proportional to sequence differences among ERVs.

Weerachai Jaratlerdsiri, et al. J Virol. 2009 October;83(19):10305-10308.
2.
FIG. 2.

FIG. 2. From: Distribution of Endogenous Retroviruses in Crocodilians .

NJ analyses of 258 putative amino acids of the pol gene from CERVs and representatives from seven known ERV genera. Symbols represent the ERV hosts used in this study, as indicated in the key. Dashed circles show the two major CERV clades, CERV 1 and 2. Clustering information within CERVs is provided in Fig. 1. ALV, avian leukosis virus; BaEV, baboon endogenous retrovirus; BLV, bovine leukemia virus; DevI, Dendrobates Ventrimaculatus ERVI; EIAV, equine infectious anemia virus; ERV-3, human ERV3; GGERV, chicken ERV; HERV, human ERV; HFV, human foamy virus; HIV-1, human immunodeficiency virus type 1; HTLV, human T-lymphotropic virus; JSRV, Jaagsiekte sheep retrovirus; MMTV, mouse mammary tumor virus; MuLV, murine leukemia virus; PERV, porcine ERV; Spev, Sphenodon ERV; WDSV, walleye dermal sarcoma virus; Xen1, Xenopus laeris ERV1.

Weerachai Jaratlerdsiri, et al. J Virol. 2009 October;83(19):10305-10308.

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