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Results: 5

1.
Figure 2

Figure 2. From: The mouse genome database (MGD): new features facilitating a model system.

Protein Superfamily: MGI Pepsin superfamily page showing mouse superfamily members with associated UniProt protein links and orthologs of each gene member in human and rat. Protein sequences from this page may be downloaded in FASTA format or forwarded to the MouseBLAST tool.

Janan T. Eppig, et al. Nucleic Acids Res. 2007 January;35(Database issue):D630-D637.
2.
Figure 1

Figure 1. From: The mouse genome database (MGD): new features facilitating a model system.

SNP searches and displays: (A) A partial screen shot showing 18 lines (of 565) returned after searching MGI SNP data for SNPs for the gene Fgf1. (B) Details of one of the SNPs for Fgf1.

Janan T. Eppig, et al. Nucleic Acids Res. 2007 January;35(Database issue):D630-D637.
3.
Figure 4

Figure 4. From: The mouse genome database (MGD): new features facilitating a model system.

GO annotations as graphs: we provide a tabular presentation of GO information as well as a computationally generated text form of GO annotations. A new format is now available for users to visualize these data graphically. Here, a graphical view is presented for GO annotations to the Slc13a1 gene.

Janan T. Eppig, et al. Nucleic Acids Res. 2007 January;35(Database issue):D630-D637.
4.
Figure 3

Figure 3. From: The mouse genome database (MGD): new features facilitating a model system.

Images of phenotypic genotypes of mice: images are being incorporated into the allele detail page for phenotypic mutants. While these currently are limited to external visible phenotypes of whole mice, in the future other relevant images such as histological or microscopic or whole animal imaging will be available. This example shows the Mregdsu allele record and its associated thumbnail image, with links to all images currently available for this mutation.

Janan T. Eppig, et al. Nucleic Acids Res. 2007 January;35(Database issue):D630-D637.
5.
Figure 5

Figure 5. From: The mouse genome database (MGD): new features facilitating a model system.

Enhanced orthology reports and comparative graphs: orthology pages now display nucleotide and protein sequences representative of the gene orthologs. These can be downloaded in FASTA format or forwarded to the MouseBLAST tool. A new mouse–human–rat comparative GO graph allows users to see similarities and differences in gene function as annotated by the respective species databases for the ortholog group being viewed. Here an example of the Apoa4 gene is shown.

Janan T. Eppig, et al. Nucleic Acids Res. 2007 January;35(Database issue):D630-D637.

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