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Select item 108089681.

Heterogeneity of computational pathomic signature predicts drug resistance and intra-tumor heterogeneity of ovarian cancer

Qiuli Zhu, Hua Dai, Feng Qiu, Weiming Lou, Xin Wang, Libin Deng, Chao Shi

Transl Oncol. 2024 Feb; 40: 101855. Published online 2024 Jan 6. doi: 10.1016/j.tranon.2023.101855

PMCID:: PMC10808968

Article PDF–4.9M

Select item 104744562.

Computerized tertiary lymphoid structures density on H&E-images is a prognostic biomarker in resectable lung adenocarcinoma

Yumeng Wang, Huan Lin, Ningning Yao, Xiaobo Chen, Bingjiang Qiu, Yanfen Cui, Yu Liu, Bingbing Li, Chu Han, Zhenhui Li, Wei Zhao, Zimin Wang, Xipeng Pan, Cheng Lu, Jun Liu, Zhenbing Liu, Zaiyi Liu

iScience. 2023 Sep 15; 26(9): 107635. Published online 2023 Aug 16. doi: 10.1016/j.isci.2023.107635

PMCID:: PMC10474456

Article PDF–5.5M

Select item 102962333.

A Weakly Supervised Deep Learning Model and Human–Machine Fusion for Accurate Grading of Renal Cell Carcinoma from Histopathology Slides

Qingyuan Zheng, Rui Yang, Huazhen Xu, Junjie Fan, Panpan Jiao, Xinmiao Ni, Jingping Yuan, Lei Wang, Zhiyuan Chen, Xiuheng Liu

Cancers (Basel) 2023 Jun; 15(12): 3198. Published online 2023 Jun 15. doi: 10.3390/cancers15123198

PMCID:: PMC10296233

Article PDF–4.1M

Select item 97493334.

Multi-scale pathology image texture signature is a prognostic factor for resectable lung adenocarcinoma: a multi-center, retrospective study

Yumeng Wang, Xipeng Pan, Huan Lin, Chu Han, Yajun An, Bingjiang Qiu, Zhengyun Feng, Xiaomei Huang, Zeyan Xu, Zhenwei Shi, Xin Chen, Bingbing Li, Lixu Yan, Cheng Lu, Zhenhui Li, Yanfen Cui, Zaiyi Liu, Zhenbing Liu

J Transl Med. 2022; 20: 595. Published online 2022 Dec 14. doi: 10.1186/s12967-022-03777-x

PMCID:: PMC9749333

Article PDF–3.7M

Select item 85047155.

Integrative Analysis of Histopathological Images and Genomic Data in Colon Adenocarcinoma

Hui Li, Linyan Chen, Hao Zeng, Qimeng Liao, Jianrui Ji, Xuelei Ma

Front Oncol. 2021; 11: 636451. Published online 2021 Sep 27. doi: 10.3389/fonc.2021.636451

PMCID:: PMC8504715

Article PDF–7.5M

Select item 83188666.

A Computational Tumor-Infiltrating Lymphocyte Assessment Method Comparable with Visual Reporting Guidelines for Triple-Negative Breast Cancer

Peng Sun, Jiehua He, Xue Chao, Keming Chen, Yuanyuan Xu, Qitao Huang, Jingping Yun, Mei Li, Rongzhen Luo, Jinbo Kuang, Huajia Wang, Haosen Li, Hui Hui, Shuoyu Xu

EBioMedicine. 2021 Aug; 70: 103492. Published online 2021 Jul 16. doi: 10.1016/j.ebiom.2021.103492

PMCID:: PMC8318866

Article PDF–2.9M

Select item 78385567.

Deep Convolutional Neural Network-Based Lymph Node Metastasis Prediction for Colon Cancer Using Histopathological Images

Min Seob Kwak, Hun Hee Lee, Jae Min Yang, Jae Myung Cha, Jung Won Jeon, Jin Young Yoon, Ha Il Kim

Front Oncol. 2020; 10: 619803. Published online 2021 Jan 13. doi: 10.3389/fonc.2020.619803

PMCID:: PMC7838556

Article PDF–1004K

Select item 77449358.

Derivation of a nuclear heterogeneity image index to grade DCIS

Mary-Kate Hayward, J. Louise Jones, Allison Hall, Lorraine King, Alastair J. Ironside, Andrew C. Nelson, E. Shelley Hwang, Valerie M. Weaver

Comput Struct Biotechnol J. 2020; 18: 4063–4070. Published online 2020 Dec 3. doi: 10.1016/j.csbj.2020.11.040

PMCID:: PMC7744935

Article PDF–2.3M

Select item 74924449.

Interactive Thyroid Whole Slide Image Diagnostic System using Deep Representation

Pingjun Chen, Xiaoshuang Shi, Yun Liang, Yuan Li, Lin Yang, Paul D. Gader

Comput Methods Programs Biomed. Author manuscript; available in PMC 2021 Oct 1.

Published in final edited form as: Comput Methods Programs Biomed. 2020 Oct; 195: 105630. Published online 2020 Jun 27. doi: 10.1016/j.cmpb.2020.105630

PMCID:: PMC7492444

Article PDF–1.7M

Select item 736732810.

Histopathological distinction of non-invasive and invasive bladder cancers using machine learning approaches

Peng-Nien Yin, Kishan KC, Shishi Wei, Qi Yu, Rui Li, Anne R. Haake, Hiroshi Miyamoto, Feng Cui

BMC Med Inform Decis Mak. 2020; 20: 162. Published online 2020 Jul 17. doi: 10.1186/s12911-020-01185-z

PMCID:: PMC7367328

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Select item 730926311.

Classifying non-small cell lung cancer types and transcriptomic subtypes using convolutional neural networks

Kun-Hsing Yu, Feiran Wang, Gerald J Berry, Christopher Ré, Russ B Altman, Michael Snyder, Isaac S Kohane

J Am Med Inform Assoc. 2020 May; 27(5): 757–769. Published online 2020 May 2. doi: 10.1093/jamia/ocz230

PMCID:: PMC7309263

Article PDF–2.0M

Select item 726257612.

Integrative analysis of histopathological images and genomic data predicts clear cell renal cell carcinoma prognosis

Jun Cheng, Jie Zhang, Yatong Han, Xusheng Wang, Xiufen Ye, Yuebo Meng, Anil Parwani, Zhi Han, Qianjin Feng, Kun Huang

Cancer Res. Author manuscript; available in PMC 2020 Jun 1.

Published in final edited form as: Cancer Res. 2017 Nov 1; 77(21): e91–e100. doi: 10.1158/0008-5472.CAN-17-0313

PMCID:: PMC7262576

Article PDF–1.2M

Select item 721782413.

Report on computational assessment of Tumor Infiltrating Lymphocytes from the International Immuno-Oncology Biomarker Working Group

Mohamed Amgad, Elisabeth Specht Stovgaard, Eva Balslev, Jeppe Thagaard, Weijie Chen, Sarah Dudgeon, Ashish Sharma, Jennifer K. Kerner, Carsten Denkert, Yinyin Yuan, Khalid AbdulJabbar, Stephan Wienert, Peter Savas, Leonie Voorwerk, Andrew H. Beck, Anant Madabhushi, Johan Hartman, Manu M. Sebastian, Hugo M. Horlings, Jan Hudeček, Francesco Ciompi, David A. Moore, Rajendra Singh, Elvire Roblin, Marcelo Luiz Balancin, Marie-Christine Mathieu, Jochen K. Lennerz, Pawan Kirtani, I-Chun Chen, Jeremy P. Braybrooke, Giancarlo Pruneri, Sandra Demaria, Sylvia Adams, Stuart J. Schnitt, Sunil R. Lakhani, Federico Rojo, Laura Comerma, Sunil S. Badve, Mehrnoush Khojasteh, W. Fraser Symmans, Christos Sotiriou, Paula Gonzalez-Ericsson, Katherine L. Pogue-Geile, Rim S. Kim, David L. Rimm, Giuseppe Viale, Stephen M. Hewitt, John M. S. Bartlett, Frédérique Penault-Llorca, Shom Goel, Huang-Chun Lien, Sibylle Loibl, Zuzana Kos, Sherene Loi, Matthew G. Hanna, Stefan Michiels, Marleen Kok, Torsten O. Nielsen, Alexander J. Lazar, Zsuzsanna Bago-Horvath, Loes F. S. Kooreman, Jeroen A. W. M. van der Laak, Joel Saltz, Brandon D. Gallas, Uday Kurkure, Michael Barnes, Roberto Salgado, Lee A. D. Cooper, International Immuno-Oncology Biomarker Working Group

NPJ Breast Cancer. 2020; 6: 16. Published online 2020 May 12. doi: 10.1038/s41523-020-0154-2

PMCID:: PMC7217824

Article PDF–2.9M

Select item 705571214.

Automated Osteosclerosis Grading of Clinical Biopsies Using Infrared Spectroscopic Imaging

Rupali Mankar, Carlos E. Bueso-Ramos, C. Cameron Yin, Juliana Elisa Hidalgo-Lopez, Sebastian Berisha, Mustafa Kansiz, David Mayerich

Anal Chem. Author manuscript; available in PMC 2021 Jan 7.

Published in final edited form as: Anal Chem. 2020 Jan 7; 92(1): 749–757. Published online 2019 Dec 13. doi: 10.1021/acs.analchem.9b03015

PMCID:: PMC7055712

Article PDF–2.2M

Select item 629813115.

Computer-Aided Laser Dissection: A Microdissection Workflow Leveraging Image Analysis Tools

Jason D. Hipp, Donald J. Johann, Yun Chen, Anant Madabhushi, James Monaco, Jerome Cheng, Jaime Rodriguez-Canales, Martin C. Stumpe, Greg Riedlinger, Avi Z. Rosenberg, Jeffrey C. Hanson, Lakshmi P. Kunju, Michael R. Emmert-Buck, Ulysses J. Balis, Michael A. Tangrea

J Pathol Inform. 2018; 9: 45. Published online 2018 Dec 11. doi: 10.4103/jpi.jpi_60_18